KEGG   Oncorhynchus nerka (sockeye salmon): 115113361
Entry
115113361         CDS       T07952                                 
Name
(RefSeq) opsin-3-like
  KO
K04256  c-opsin
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115113361
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:one04030]
    115113361
Protein phosphatases and associated proteins [BR:one01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115113361
G protein-coupled receptors [BR:one04030]
 Rhodopsin family
  Vision
   Opsin
    115113361
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srsx
Other DBs
NCBI-GeneID: 115113361
NCBI-ProteinID: XP_029496773
LinkDB
Position
LG28:complement(38676533..38692619)
AA seq 395 aa
MFGSEVIQAINPANLASTEKNTEEYIFAVGTYKLLAFAIGTIGVFGFCNNIIVIVLYYRF
KRLRTPTNLLIVNISISDVLVSVIGINFTFVSCIKGGWVWNSATCIWDGFSNTLFGIVSI
MSLSALAYERYIRVVHAKVVDFPWAWRCITYIWLYSLVWTGAPLLGWNRYTLEIHQLGCS
LDWTSKDPNDSSFVLFFLLACFFVPVGIMIYCYGNILYTVQMLRSIQDLQTVQIIKILRY
EKKVAVMFLLMISCFLVCWTPYAVVSMMEAFGRKSMVTPAVAIIPSFFAKSSTAYNPLIY
ISMSRKFRRCLLQLLCSRLSWIQHRVKDRPLARSIERPIRPIFMSHRGDGERPKKRVTFS
SSSIIFIIANNDIHHLDTTSKSGRMLSEVIQVRPL
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgtttgggagcgaagttattcaagcaataaatcctgcgaatttagctagcactgaaaaa
aatacagaagaatatatatttgcggttggtacttacaaactccttgcttttgccatcgga
acaatcggagtcttcggattttgcaacaatattattgtcatcgtgctgtactacagattc
aagagactccggacgcccacaaatttgttaatagtaaacattagtataagtgacgttttg
gtgtctgtcattggaattaactttacgtttgtttcgtgcatcaaaggcggatgggtctgg
aactcggcaacatgcatttgggacggattcagcaacactttatttggcatcgtgtccatc
atgagtctctctgccctggcctatgagcgctacatccgggtggtccatgctaaggtggtg
gacttcccctgggcctggaggtgcatcacttacatctggctctactccctggtctggaca
ggggctcctctcctggggtggaaccgctacactctggagatccaccagttaggctgctct
ctggactggacttccaaggaccctaacgattcctccttcgtcctcttctttctcctggcc
tgcttcttcgtaccagtgggcattatgatctactgctacgggaacattctttacacagta
caaatgctccgctccatccaggaccttcagacagtgcagattattaagatcctgcgctac
gagaaaaaggtggccgtcatgttcctcttgatgatctcctgtttcctggtgtgctggacg
ccctacgccgtggtgtccatgatggaagcctttggcaggaagagcatggtcacccctgcc
gtcgccatcatcccctccttcttcgccaagtccagcacggcctataaccctctcatctac
atctccatgagcagaaagttccggcgctgcttgctgcagctgttgtgctcccggctctca
tggattcagcacagggttaaggaccgccccctggcccggagcatcgagcggcccatccgc
ccaatcttcatgtcccaccgaggagatggggaacgaccaaagaagagggtgaccttcagc
tcctcctccatcatcttcatcatcgccaacaacgacattcaccacctggacaccacctcc
aagagtggccgtatgttgtcagaggtcatccaggtgcggccgctgtga

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