Oncorhynchus nerka (sockeye salmon): 115113369
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Entry
115113369 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-binding protein Ikaros-like
KO
K09220
IKAROS family zinc finger protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115113369
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115113369
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115113369
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
115113369
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-C2H2_11
DUF6487
zf-H2C2_5
zf-C2H2_REST
CPSF100_C
GAGA
zf-met
Motif
Other DBs
NCBI-GeneID:
115113369
NCBI-ProteinID:
XP_029496789
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Position
LG28:complement(39032797..39056540)
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AA seq
624 aa
AA seq
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MAASNGLLGVSFYWHDTKQEPRAAASLPKQTRPLDKSKQNASVEHRNIEMLGWKEEVQWR
GEGPRAEFHGAAAALRTSAHGAGESWKNFILQTQGIAEYLHRMETEEAQEMSQMPGRDSP
PPNDVSEENDEAMPIPEDLSASSNLQHNNRGDKEGMACNIKVEARSDEENGLAIDMMMNG
EEEEECAEDLRVLDASGAKVNGSHAGGPDSKGPYSSAGGIRLPNGKLKCDICGIVCIGPN
VLMVHKRSHTGERPFQCTQCGASFTQKGNLLRHIKLHSGEKPFKCHLCNYACRRRDALSG
HLRTHSVGKPHKCAYCGRSYKQRSSLEEHKERCHNYLQCMGLQNSIYTVVKEESNQNEQR
EDLSQMGSKRALVLDRLANNVAKRKSTMPQKFVGEKRLSDISFEGGPGELMQPHVIDQAI
NSAINYLGAESLRPLIQTSPTSSDMGVMGSMYPLHKPPAEGHGLSAKDSAAENLLLLAKS
KSASSEKDGSPSHSGQDSTDTESNNEERAGVGASGLIYLTNHITSGVRNGVLPLGKEEQQ
RQYEAMRASIEIASEGFKVLSGEGEQVRAYRCEHCRILFLDHVMYTIHMGCHGFRDPFEC
NLCGHRSQDRYEFSSHMTRGEHRY
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagtaatggtctactgggtgtcagcttttattggcacgatacaaagcaagag
ccaagggctgctgcctccctccccaagcagactcgacctctggataaaagcaagcaaaat
gcctcagtcgagcacagaaacatagaaatgttaggctggaaagaggaagtacagtggaga
ggggagggaccgagggcagagttccatggggctgccgcggcgcttcgaacttctgcacat
ggagcgggggagagttggaagaacttcatattgcaaactcaaggaatagcagagtacctg
caccgaatggagacggaggaggcacaggagatgtctcagatgccaggcagggacagcccc
cctcccaatgatgtgtctgaggagaacgacgaggccatgcccatcccagaggacctgtct
gctagctccaatctgcaacacaacaacaggggtgacaaagaaggcatggcctgtaacatt
aaagttgaggctcgcagtgacgaggagaatgggctcgccattgacatgatgatgaatggc
gaggaggaggaggagtgtgcggaagacttgcgcgtgctcgatgcctcgggggccaaagtg
aacggctcccatgcaggcggccccgacagcaagggcccctactcctcggctgggggtatc
cgcctgcccaacgggaagctcaagtgtgatatctgtgggatagtttgcattggccccaat
gtgctgatggtgcacaagcgaagccacactggagagcgtccattccagtgcacccagtgt
ggcgcttctttcacccagaaaggcaacctgctacgtcacatcaagctccactcaggagag
aagcccttcaagtgtcacctgtgcaactatgcctgtcgccggagagacgccctcagcggt
cacctgcgtacccactctgttggaaaaccccacaagtgtgcctactgtgggcggagctac
aagcagcgtagctctctggaggaacacaaggagcggtgtcacaactacctccagtgcatg
gggctgcagaacagcatctatacagtagtaaaggaagaaagcaaccagaatgagcagagg
gaagacttaagccagatgggatctaagagagccttggtgctagacagactagctaataat
gtagccaaacgtaagagcactatgccacagaagtttgtaggtgagaaacgcctctccgac
atctccttcgagggtggcccgggggaactgatgcagcctcatgtcatcgaccaggccatc
aacagtgccatcaactacctgggtgccgagtcactccgaccgctcatccagacctcccca
acctcctctgacatgggggtcatgggctccatgtaccccctccacaagccccctgcagag
ggccacggcctgtcagccaaggacagcgcagccgaaaatcttctgttgctcgcaaagtcc
aagtcagcctccagcgagaaggacggctcccccagccacagtggccaggattccaccgac
acggagagcaacaatgaagagagggcaggtgtcggggcctcaggcctcatctacctgaca
aaccacatcacgtccggagtacgtaatggcgtgctgcccctggggaaggaggaacagcag
cggcagtacgaagccatgcgggccagtatcgagattgcctcggaggggttcaaggtgctg
agtggagagggggagcaggtgagggcatatcgctgtgaacactgccgcatcctcttccta
gaccatgtgatgtacaccatccacatgggctgccatggcttccgagaccccttcgagtgc
aacctctgtggccatcgcagtcaggaccgttacgagttttcgtcacacatgacccgaggg
gagcatcgctactga
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