Oncorhynchus nerka (sockeye salmon): 115113372
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Entry
115113372 CDS
T07952
Name
(RefSeq) poly(rC)-binding protein 3-like isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115113372
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
115113372
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Motif
Other DBs
NCBI-GeneID:
115113372
NCBI-ProteinID:
XP_029496791
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Position
LG28:complement(39152062..39177869)
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AA seq
436 aa
AA seq
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MSDKEDGASGGGLNVTLTFRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPER
IVTITGPTEGIFRAFSMIAEKFEEDITAAMTNSTVTSHPPVTLRLVFPGSQCGSLIGKGG
SKIKEIRETTGAQVQVAGDMLPESTERAVTISGTPQAITQCVRHICSVMLESPPKGATIP
YRPKTMPGAGHPVFQQQQQHASQAFTIQGQYAFPHQDLTKLHQLAMQHIPLPSLGQSNPT
FPGMGASVPTSSQELAIPNELIGSIIGRHGSKVNEIRQVSGAHIKIASATDGSPMRQVTI
IGSPTSINVAHYLINASLEMAKYTMHVASSASPVDLNNMSFSQSVPTASTPTSMAVMAAT
TQVPGTMNMHSPSTLQSIPTQHYAVPVSSLLGMKTLPMLAMHPAAASGLPQGLSPYSTKV
PTAGMKKSDRQKFAPY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggaagatggggcctcagggggggggctgaatgttaccctcacgtttcgg
cttctcatgcatgggaaggaagtgggcagcataattggaaagaaaggggaaaccgtcaaa
aagatgagagaggagagtggcgctcgcatcaacatttcagagggatcttctccagagagg
attgttaccatcacaggaccaacagagggcatcttcagagctttctctatgatcgctgag
aagtttgaggaggacattacagctgcaatgacaaacagcactgtaacaagccatcctcca
gtgacactccgccttgtgttcccaggcagtcaatgtggctccttgataggcaaaggaggc
tccaagatcaaggagatccgagagaccacaggtgctcaggtgcaggtggcaggggacatg
ctgccggaatccactgagagagctgtcactatctcaggcactcctcaggccatcacgcag
tgtgtcagacacatctgctctgtcatgctggagtcaccccccaaaggagcaacaatccca
tatcgccccaagaccatgcctggagctggccatccagtatttcaacaacaacaacaacat
gcctcacaagccttcacaattcaaggacagtatgcttttccacatcaagatttgaccaag
cttcaccagttggctatgcagcatatccccctcccttcccttgggcagagcaaccctacc
ttccctggaatgggtgcctctgtccccaccagttctcaggagctggcaatacccaatgaa
cttattggctccataattggcagacacggcagcaaggtcaatgagattcgccaggtgtca
ggagctcacattaagatagccagtgccacggacggatcgcccatgcgccaagtcacgatc
ataggctctccgaccagcatcaatgtggcacactacctcatcaatgccagcttagagatg
gctaaatacaccatgcatgttgcttcctctgcatcacctgttgacctcaacaacatgagc
ttctctcagtctgttcccactgcctccacaccaacctctatggctgtcatggctgccact
acccaagtccctggcaccatgaacatgcactccccctccaccttacagtctatccccacc
cagcactacgctgtccccgtttccagtctacttggcatgaaaacgctccctatgctggct
atgcacccagcagctgcctcaggccttccacaaggtctatccccttacagcactaaagta
cctactgctggcatgaaaaaatctgaccgccagaaatttgccccatattga
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