Oncorhynchus nerka (sockeye salmon): 115113387
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Entry
115113387 CDS
T07952
Name
(RefSeq) PDZ and LIM domain protein 1-like
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115113387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115113387
Domain-containing proteins not elsewhere classified [BR:
one04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
115113387
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Ortholog
Paralog
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GFIT
Motif
Pfam:
DUF4749
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115113387
NCBI-ProteinID:
XP_029496818
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Position
LG28:39781300..39798932
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AA seq
216 aa
AA seq
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MPLQVVVQGPGPWGFRLVGGKDFEQPLTISRVTHGSRAAQANLCIGDQILAIDGEPTENM
SHLQAQNKVKGCLEEMVLSIDRSESKMWSPLSSEEGKTNSYKMNLASKPQEVKRIGSAHN
RSALPFAGFGPKVVTNQYNNPAGLYSSENIKDFNATVDGVKTIGTAANEPSTVSDPSGIL
PPIVADSEVYKMLQENQEADEPPRQSASFKVLQDIL
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcctctacaagttgtcgtgcaaggtcctggaccttggggattccgtctagttggtggg
aaagattttgaacaacccttgactatctcgcgggtcactcatggcagtagggctgcacag
gccaatctgtgtatcggggatcagatcctggccatagatggagagcccactgagaacatg
tctcacctgcaggcacagaacaaggtcaagggctgcttagaggaaatggtcctttctatt
gacagatctgaatctaaaatgtggtcaccgctctcttctgaggaaggaaagaccaactct
tacaagatgaatcttgcatctaagccgcaggaggtgaaacgcataggttccgcccacaac
aggagcgccctgccattcgctgggttcggccccaaggtggtaaccaatcagtacaacaac
cctgccggtctgtactcctcagagaatatcaaggacttcaacgcgactgtggatggcgtg
aaaaccatcggcactgctgctaatgagcccagcaccgtctcagatccgtccggtattctg
ccaccaatagtggcagactctgaggtctacaaaatgctgcaggaaaaccaagaggctgat
gagcctcctcgacagtcagcttcattcaaagtgctgcaggatattttgtag
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