Oncorhynchus nerka (sockeye salmon): 115113388
Help
Entry
115113388 CDS
T07952
Name
(RefSeq) sphingosine-1-phosphate lyase 1-like
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00600
Sphingolipid metabolism
one01100
Metabolic pathways
Module
one_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
115113388
Enzymes [BR:
one01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
115113388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
Motif
Other DBs
NCBI-GeneID:
115113388
NCBI-ProteinID:
XP_029496819
LinkDB
All DBs
Position
LG28:39830929..39850983
Genome browser
AA seq
568 aa
AA seq
DB search
MDYWSALEVYKEMLLLYLEEGRRLVNTNCEALEPWQIIGATLIATLGAVWVKGFLFQQET
LTSRIKKQCFRLIRKIPFVGAAIQTQLNKALDDMSVSLCTLKEGMNYTKQLPEQGLTQAE
VLDRISEYETLNEVDWENGRVSGAVYWGDQTLTKLLVKVYGDFAWSNPLHPDIFPGVRKM
EAEVVRMTCTLFHGGPNTCGTVTSGGTESILMACKAYRDMAYERGVKHPEIIAPISVHAA
FDKAANYFGMKLVHIPLDKNTMKVDVKAMRRAISKNTAMLVCSAPQFPHGIIDPIEEVGK
LALKYNIPLHVDACLGGFLIVFMAKANYPLAPFDFRVKGVTSISADTHKYGYAPKGSSVI
LYSDKKYRHYQYFVAPDWQGGIYASPSVAGSRPGGIIAACWATMMHMGEDGYIKATKKII
DTARTIKTEIRKINGVFVFGDPEVSVVAIGSDVFDIFRLSNALTSKGWNLNMLQYPSSIH
ICCTVLHTHEGVAKQLISDIKEQVALILKNPNEKTTGMGAIYGMAQSIPDRSMVTEISRG
FLDCLYSTEEPKSSQPQKTHMNGNGKAH
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggactattggagtgccttggaggtgtacaaggagatgctgttgctctacctggaggaa
ggcaggcggcttgtgaacaccaactgtgaggcgttggaaccatggcagatcattggagcc
actctcatagctaccttaggagcagtctgggtcaaaggcttcctgtttcagcaagaaacc
ctgacatcccgaatcaagaagcagtgctttcgactcatcagaaaaataccctttgttggc
gcggcaatccagacccagctgaacaaggccctggatgacatgtctgtcagtctttgcaca
ctgaaggagggcatgaactacaccaaacagctgcctgaacaagggctaacgcaagctgaa
gttctagacaggatcagcgagtacgaaacactgaatgaagtggattgggagaatggacga
gtgtccggtgcagtgtattggggagatcagacacttaccaaacttttggtgaaggtgtat
ggagactttgcatggagcaacccacttcacccagacatctttcctggtgtgaggaagatg
gaggcagaggttgtaagaatgacgtgtaccctcttccacggtgggcccaacacttgtggc
acagtcacctctgggggaactgaaagcatattgatggcatgcaaggcgtacagagacatg
gcctatgagcgcggtgtgaaacatcctgaaatcattgcaccaatcagtgtccatgctgcc
tttgacaaagcagcaaactactttggaatgaagcttgttcacatccccctggacaagaat
acaatgaaagtggatgttaaggcgatgaggagagctatcagcaagaacacagccatgctt
gtatgttccgcaccccagttcccgcatggaatcattgatcctattgaggaagtaggaaag
ctggctttaaagtacaacatccctctgcatgtggatgcttgtttgggagggtttctcatc
gtgttcatggccaaagccaattatccactggctccctttgacttcagggtaaagggtgtg
accagtatatctgcagacacacacaagtatggctacgcccctaaaggttcatcagtgatc
ctgtatagtgacaagaagtacaggcactaccagtactttgtggctccagactggcaaggg
ggcatctatgcgtccccatcagtggcaggatctcggccaggcggtatcatcgcagcgtgc
tgggctaccatgatgcacatgggagaggatggctacataaaggccaccaagaagataatt
gacactgcacgtaccatcaagacagaaatccgaaagataaatggggtgtttgtgtttgga
gaccctgaagtgtccgtggtggcaataggctctgacgtcttcgacatttttcgtttatcc
aacgcactgacttcaaagggttggaatctcaacatgctacagtatccatccagcatccat
atctgttgtactgtactgcacacacatgaaggtgtggccaaacagttaatcagtgacatc
aaagagcaggtggctctcattttgaaaaaccccaatgagaagaccactggaatgggagca
atctatggcatggcccagtccatccctgacagatccatggtgaccgagatctcccgaggc
ttcttggactgcctctacagcacagaggagcccaagtcgtctcagcctcagaagacccat
atgaatggcaacggcaaggcccactga
DBGET
integrated database retrieval system
