Oncorhynchus nerka (sockeye salmon): 115113391
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Entry
115113391 CDS
T07952
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 2-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115113391
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115113391
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
115113391
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
115113391
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115113391
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Ortholog
Paralog
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
MRPL52
DUF2706
Motif
Other DBs
NCBI-GeneID:
115113391
NCBI-ProteinID:
XP_029496823
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All DBs
Position
LG28:39952140..39966854
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AA seq
539 aa
AA seq
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MPRRSLPLQGRMRWMLLGLFLLLVLLLFAYLLECTPPADVSLVLPGLGGESHGKEYYQAL
LQEQEERYLSRSASLKRQIAQLKQELQEMSEKLKVLQDRKEGPGVQGIVETKDQEPGDLL
EFLHSQIDKAEVNTGARLPSEYALVPFESFTSSKVYQLEMGLTRHPEEKPVRKDRRDELV
EVIEAALDVINNPDEEDGQEDDVPMQRQTYTESHFTEGLYRTERDKGTLYELFFAKEDSD
NFRHVTLFRPFGPLMKVRSTSVETTGVIINIIVPLAGRTEAFSQFLHNFREVCIEHDRRV
HLTVVYFGQEGLQEVKSYLEKMSREASFSNYTLIPVDEEFSRGRGLDIGAHTWKKGDVLM
FFCDVDIYFTLDYLNTCRLHTAPNKRVFYPVVFSLYNPAIVYGNLELAPPIESQLIHKKD
AGFWRDFGFGMTCQYRSDFLNIGGFDLEVKGWGVEDVHLYRKYLRSDLIVTRTPVSGLFH
LWHEKQCADELTPEQYRMCIQSKAMNEASHSHLGMLVFREEIENHLRKQAYKTQSNTEN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggcgaagcttgccgctgcagggccggatgcgctggatgctcctggggctcttc
ctgttgctggtcctcctcctctttgcttacctgctggagtgcactcccccagctgatgtt
agcctggtcctgcctggcctgggaggggagtcccatggaaaggagtactaccaggcactg
ctgcaagaacaggaggagcggtacctcagccgctccgccagcctcaagcggcagatcgcc
caactcaagcaggagctccaggagatgagtgagaaactcaaggtcctgcaggacagaaag
gaaggtcccggggtccaggggattgttgaaaccaaggaccaggagcctggggatcttctc
gaattcctccactcccagatcgacaaagccgaggtgaacacgggagcacgactgcccagc
gagtacgccctggtccccttcgagagcttcacctctagtaaggtgtatcagctggagatg
gggctgaccaggcacccagaggagaagcctgtgcggaaggaccgcagggatgagctggtg
gaggtcattgaggcagccctggacgtcataaacaacccagatgaggaggatggccaggag
gatgatgtgcccatgcagaggcagacctacaccgagagccactttactgaggggctgtac
agaacagaacgggacaagggcacactctacgagctcttctttgcaaaagaggactccgac
aacttccgccatgtcactcttttccgtccttttggtcctttaatgaaagtcagaagcacg
tctgtagaaacaactggagtcatcattaatatcattgtgccgttggcaggcagaacagag
gcattctcacagttcctacacaacttcagggaagtgtgcatagaacatgataggcgagtg
catcttacagtggtctactttggacaagagggcttacaagaggtgaagtcttacttggaa
aaaatgtccagggaggcaagcttttccaactacacacttatcccagtggacgaggagttt
tccagaggcaggggtctggacatcggtgcccatacctggaagaagggtgacgtattgatg
ttcttctgtgatgtggatatctacttcacactggactatctcaacacctgccgtcttcac
accgctccaaacaagagagtcttttatccggtggttttcagtttgtataatcctgccata
gtctatggaaatctggagctggctccccccattgaaagtcaacttattcacaagaaagat
gctggattctggagagattttggctttggaatgacatgtcagtaccgctcggacttcctc
aatataggaggttttgacctggaagtgaaaggttggggtgtggaagatgtccacttgtac
aggaagtacctgcggagcgacctgattgtgacgcgtacgccggtatctggcctcttccac
ctgtggcacgagaagcagtgtgcagacgagctgactccagaacagtatcgcatgtgcatc
cagtccaaagccatgaacgaggcttcccattcccacctaggcatgctggtgttccgcgag
gagatcgagaatcacctccgcaagcaggcctacaagacccagagcaatactgaaaactga
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