Oncorhynchus nerka (sockeye salmon): 115113396
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Entry
115113396 CDS
T07952
Name
(RefSeq) myopalladin-like
KO
K22028
myopalladin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115113396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115113396
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
115113396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
115113396
NCBI-ProteinID:
XP_029496840
LinkDB
All DBs
Position
LG28:complement(40088661..40137958)
Genome browser
AA seq
1909 aa
AA seq
DB search
MQENNVNQPTSLSQLLRENYLAEARAHQRHRGMSRSDSSWHLVYVPLKGKAEDSAGQDKP
QPQIPDLSAFLSQEELDKSVNLACQAIGHEAGEERTEFKAPVTPSVTSTASNTPDTQPDL
ELKEPLPTHATFFPERRSFSPLSIPDNVIRIDKQIYQPSQLSIQDNAIRTDRQKYPLSQS
SIQDNDTGTDRELYPPSIQDNDTRTDRQTFPPSIIQDITMKNNCVAREAFEDFKRPGARG
MNTPEYGLGTQSKKEFLNKAADFIEELSSLFKANSSKRIRPRSCKTHRSRANKGEVDGSV
YSLNADNRERTILLQDFETEMEIERSTNPFSIQPSEVQGLGMDSGFGHAYFPMQDWRTTE
EQNDEAESPALVEITPGVYTADSICEPPHFIQKLKSREVLEGSKVQLDCIVRGLPMPEVR
WFCEGKELENCPDIQIINNGELHSLTIAEAFEEDTGRYSCFASNFYGTDSTSAEIYVKGA
SSTDSEGEQHSELAQLQRTRAQPGAQCLPPVVSVVSLCVDDATNATEEQPQEATSLPSSQ
VVTASVPVQVATNVLPVTEVTTAPSTQVAFTLVPAQEMSAQLPVQVVSTLDLPPVDTASV
LSLPTQSRVTVTSTPLPTQTVSTTAIPLTQVVSSILPAQVAAVQTTLAENLNGDSYTLSP
DIYPQGLDGRPIMAAPVFTKSLQDLLASESELVVLECRVKGVPSPKVDWYREGTVIEDSP
DFRILQKKPRSMDESEEICTLVIAEVFPEDSGKFTCTASNKYGTVSSIAALRVKGNDNTN
NNHVKTLVGTLTMESTQVPEPSSSDLTLPRLKPQAEALVTNSIKPHSSTIRLDPFSSSNL
RLEPLSTSTLRVDPLSSSMLRQVPISPSMPSLDPLRLGSSLRIGTRSSNTSHLDPLYLST
PHPDLPTSSSGLCPEPQSSGEMPKTDQGDSRAFSVLPDPPVGLWPKVEGTPIHKPEPPPH
VNLPDPPNSSCLKPGVLVNHNGPRSSSRAGLRVHFKLPEDETENQSEASNSHSYEDMSQL
ANKEPPAVLAKPKLDPVQLQLLHNQVLMEQQQTETEPNGATKSQPEASAWPAQTHHESQA
QTQAQPQSNLPRSSTPMLLQTTHAAPILTTAPTPFLNSAPVTSLNTTPTPQLDTSPPAHL
LNIASAPLLNPYTTHSYSTSSPLLNTRPVPPKNTTSATLLNTAPPAPVMGTLPSLPQLKT
APSCMSSPPSASLLRTVPAPHLYTSPASPPYMTQQNTTHSSQLNLTHSSLPKAIHVPKFS
TPPTPHLNTAPTASLSAIPAAFNKAPTTMQNTSPTPLLRTTHASLLNLAPTSQSFNYSRP
KEFITAQTPLSPFRSPSPTESPVPLLHKLAAELNSSYPNQFSPQPRVLPTRVLKSPTSPP
SFMSSPTSLTMLPAAYLNSVFALPQQSPPQAASPTSSTSSPIQNHVAFLSSVLPSLHTTQ
ATNSMGLPRSAHRPPQGILKKLPTSTRPILDYDIRSSQQTLLHDIEKKLRFNEDLMRGHV
QQKPTTYEGKTASRHLGPNIPATVFNYDEEYKVSNFEQRLMSEIEFRLERTPVEESDDEV
QHDEIPTGKCIAPMFGKKLKNFRAMEGVPMTFSCKVVGIPVPKVYWFKDGKQILRKNYHY
KKIREGDGTCALHIEVTNNDDDGNYTVLAANPQGRISCSGHLIIQTGPLRNRMTPMIHSQ
RVRARIQEVEEGEPTQERFFQPHFLQAPGDMVAHEGRVCRLDCKVSGLPNPELMWLINGR
PIYPNFYHRMLVRENGIHSLVIDPLKQDDAGTYTCIASNKAGQSSFGLELRVVEKEMKQV
PQFVEKLQNTGIAEGTPVRLECRVLGMPPPVIYWKKDNDTIPHTKARVSLHQDATGYVFL
LIQPTRKEDAGWYTVSAKNEAGIVSCTARLDIYAQWHQHVPLPMTKAPW
NT seq
5730 nt
NT seq
+upstream
nt +downstream
nt
atgcaagagaacaatgtgaaccagcctacatcattgtctcagctcttgagagagaactac
ttggccgaagcgagggcgcaccagagacacagaggcatgagccgttccgactcctcgtgg
cacctggtctacgtgcccctcaaaggcaaggcggaggactccgcggggcaggacaagccc
caaccccagatcccagacctctcagccttcctgagccaggaagaactggataagagtgtc
aacctggcctgtcaggctatcgggcacgaggccggcgaggagaggacagagttcaaggcc
ccggtcaccccttctgtcacctccactgcatccaacactcccgacacccagcctgacctg
gaattaaaagaacccctaccaacacatgcaacattcttcccagagagacggtcattctca
cctctgtccataccggacaatgtgataaggatagacaaacagatatatcagccatcccaa
ctgtccattcaggacaacgcaataaggaccgacagacagaaatatccactgtcccaatca
tccatccaggacaacgacacagggacagacagagagttgtacccaccgtccatccaggac
aacgacacgaggacagacagacagacgttcccaccgtccatcatccaggacattacaatg
aagaacaactgtgtggccagggaggcctttgaggactttaagaggccaggggctaggggg
atgaacactccagagtacggcctggggacccagtccaagaaggagttcctcaacaaggca
gcagacttcatcgaggagctctcctctctgttcaaggctaacagctccaaaaggatacgt
cccagatcatgcaaaactcataggagcagagccaacaagggtgaagtggatgggagcgtt
tactccctgaatgcagacaacagggaaagaaccattcttctccaagacttcgaaacggaa
atggagattgagaggtctactaatcctttcagcattcagccatcagaagtccagggtttg
ggcatggattcagggtttgggcatgcttacttccccatgcaggactggaggactactgag
gagcagaatgatgaggctgaaagccctgccctggtggagatcacccccggggtgtacaca
gccgactccatctgtgagccccctcacttcatccaaaaactgaaaagcagggaggtgctg
gagggcagcaaggtacagctggactgcattgttcgaggactccccatgcccgaagtccgg
tggttttgtgaggggaaggagctggagaactgccctgacattcagatcatcaacaacggc
gagttgcactctctgaccattgccgaggcattcgaggaagacacagggcggtactcttgc
tttgcatccaacttctacggcacagactcgacatctgcagaaatctacgtcaaaggtgcc
tcctctacagattcggagggggaacaacattctgaacttgcacaactacagaggacccga
gctcagccgggtgcccaatgtttacctccagtggtcagtgttgtgtctctgtgtgtggat
gacgcaaccaatgccactgaagaacagccacaggaggccacctcactgccttctagccag
gtagtcactgcatctgtacctgtccaggtagctactaatgtccttcctgttacggaggtg
acaacagcaccatccacccaggtggcgtttacattggtccctgcccaggagatgtcagca
cagttacctgtccaggtagtttctactctagatctaccgcctgtggacacggcgtcagtt
ctgtcactgccaacacagtcacgggtcacagtgacgtccacaccattaccgacacagaca
gtctctaccacggcaataccgctgacccaggtggtctcctctatactgcctgcccaggtt
gctgccgtacagacgactctagctgagaacctaaatggagacagctatactctaagtcca
gacatctatcctcaaggtctagacgggaggcctatcatggctgcccctgttttcacaaag
agtctgcaggacctgttggcatcagagagcgagctggtggtgctagagtgccgtgtaaaa
ggagtcccctcccccaaggtggactggtacagagaaggaactgtcatagaggactcccct
gacttcaggatcctgcagaagaagcctcggtccatggatgaatcagaggaaatatgcact
ttggtcattgctgaagtcttccctgaagattctggaaaattcacttgcactgcaagcaac
aaatatggaactgtatccagtatcgctgcactaagggtgaaaggaaatgacaacaccaac
aacaaccacgtgaaaactctcgtaggcactttaacaatggagtccacacaagttccagag
ccttcttcatcagatctcactctgcccagactaaagcctcaagctgaggctcttgtcacc
aacagcatcaagcctcactccagcaccatccgcctggatcccttcagctccagcaattta
cgactggaacctctgagcaccagtaccctccgtgtagaccctctgagctccagcatgctg
cgccaggtgcctatcagccccagcatgcccagcctggatccactaaggctgggcagcagc
ctccgtataggcacccgtagctccaacacatctcatctggacccactctacctgagcacc
cctcacccagacctgcctactagctccagcgggctatgcccggagccccagagcagtggt
gagatgcccaagactgaccagggagactccagagccttttcagtgttacctgaccctccc
gttggtctttggcctaaggtggaagggactcctatccataaacctgagccccctccccat
gtaaacctccctgatccccccaactcctcctgccttaagcctggggttctggttaaccac
aacgggcccaggtccagctccagggcaggcctccgtgtgcactttaaactgcctgaggat
gaaacggaaaaccagagtgaagcatccaatagccattcatatgaagatatgtcgcagttg
gccaataaggaaccacctgcagtactggccaagcccaaactagatcctgtccagctgcag
cttctgcacaaccaggtgcttatggagcagcagcagactgagactgagccaaacggagcc
accaagagccaaccggaggcatctgcctggccagcccagacacaccacgagtcccaggca
cagacccaagcccagcctcagtcaaacctgccccgttcatctacccccatgctcctgcag
accacccatgccgcacccatactgaccacagccccaacaccctttctcaactccgcccct
gtgacaagcttgaacactacccctacaccccagctagacactagtccccctgcccacctg
ctaaacattgcatctgcaccgctactgaacccatacaccacccattcctattctacttct
tcacccctgctaaacacacgccctgtaccaccaaagaacactacctctgcaacgctactg
aacacagcccctcctgcaccagttatgggtaccctgccgtcccttcctcaattgaagaca
gctccttcttgtatgagctcccctccatctgcctctctgctgagaactgttcctgcacca
cacctgtacaccagccctgcatccccaccctatatgacccagcaaaacaccacccattct
tcccagctgaatttaacgcactcatccctgcctaaagccattcacgtacccaagtttagc
acacctcccacacctcatctgaatacagcccccacagcatctctcagcgccatccctgca
gctttcaacaaagcccccacaaccatgcagaacacctcccccactcccctgctcagaaca
acccacgcctccctcctcaacctggctcctacgtcacagagcttcaactactctaggcca
aaggagttcatcactgcccagactcccctctctccatttaggagtccctctcctacagag
tcccccgttccgttgctccacaagctggctgccgagctcaactcctcctaccccaaccag
ttctctccgcaacccagagtcttacccaccagagtcctcaagtcacccaccagcccccct
tccttcatgtcctcccccacctccctgaccatgttgcctgctgcctacctaaactctgtg
ttcgccctgccacagcagtcgcccccgcaggcagcgtccccgacctccagtacctccagc
cccatccagaaccatgtggccttcctcagctctgtcctgccctctctacacaccacacaa
gccaccaactctatgggcctgcccaggagtgctcataggccacctcaaggcatactgaag
aagttgcctacaagcactcgtcctattttagattatgatattcgtagcagccaacaaact
ctcctccacgatattgagaaaaagcttaggttcaatgaagatttaatgcgtggtcatgta
caacagaagccgactacttatgaggggaaaacagcgagcagacacctcggaccaaacatt
cccgccactgtctttaactatgacgaggagtacaaagtgtccaactttgagcagaggctg
atgagtgagatagagttccgtctggagcgcacgccagtcgaggagtcagatgacgaggta
caacacgatgagatcccaacagggaagtgcatcgctcccatgtttggcaaaaaactgaag
aacttcagggccatggagggtgtgcctatgacgttctcctgtaaagtggtggggatccct
gtacctaaggtttactggttcaaggatggcaagcagatcttgagaaaaaattatcattat
aagaagatacgagagggggacggaacctgtgccctacacatagaggtcaccaataacgac
gatgatggcaactacactgtcctggcagctaacccccagggacgaatcagctgctccggt
catttgatcatccaaacaggtcctctccgaaaccgaatgacacctatgattcactctcag
agggtgcgggcccgcatacaggaagtggaagagggtgaaccaacccaggaacgcttcttc
caacctcacttcctccaggctccaggggacatggtggctcatgagggcagagtctgtaga
ttagactgcaaggttagtggccttccaaacccagagctgatgtggctgatcaacgggagg
cccatctacccaaacttctaccaccggatgctggtgagggagaatggaatccattccctt
gtcatagaccctctaaaacaggacgacgctgggacatacacttgcattgccagcaacaaa
gcaggacagagctccttcggtctagagttaagagttgtggaaaaagagatgaagcaggtc
ccccagtttgtggagaagctccagaacacaggcatcgcagagggcacccccgtccgactg
gagtgcagggtgctgggcatgcctccacctgtcatctactggaagaaagacaatgacacc
attcctcacaccaaggccagagtcagcttacaccaggatgccactggatatgttttcctc
ctgattcagccaaccaggaaagaggatgctggctggtacaccgtatcagcaaagaatgag
gccggaattgtttcatgcacagcgagactagacatctatgcccagtggcatcaacatgtt
cctctgcctatgacgaaggctccgtggtaa
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