Oncorhynchus nerka (sockeye salmon): 115113407
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Entry
115113407 CDS
T07952
Name
(RefSeq) peroxisome proliferator-activated receptor gamma coactivator-related protein 1-like
KO
K17963
peroxisome proliferator-activated receptor gamma coactivator-related protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
one03029
]
115113407
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Coactivators
115113407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
115113407
NCBI-ProteinID:
XP_029496861
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All DBs
Position
LG28:40839428..40870211
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AA seq
1345 aa
AA seq
DB search
MEFFSTNTLDEVVDLHGGLSSESLARLELDTGEALEALHCCLDPSILSIFEDTPSGENKF
GLDEVNQATLLTALTEILDNVDNENISHFDTLSDSDLLSGQKHRENSPLKRMLCLSCSPP
ERETLCNTRQFSTGKSLPRTQKSVQRSDGEEEEDGEQEFLNWDGLNLPLPLALEQHMEEE
GEDGESMSVSLGELVRHMHPCCMAVCMENGEGEEQMLAEKRILLDVVDQGAHRESIFALP
DMGLSLCHPSFSLSGVEDSSEAEQRVPDEVLEAAILETPESANDDVVVEDDPAEVTGPSD
PAVTLRSETSGEKVINRRPKEETAERCPSRRKRKRKNKMENSPPEVTPEPDQAEGRVLRR
VAQESSPLEPVKETTKPKKKDKNMSLTSSISTAAPEAPKHKTSATHAAETQRQSHVEVTT
LVPPTQLSIKVIPASDLLPMTMTPEKVTQPTTACRKPQGPPASTANPTAHQMMEAPQEMT
IKAPSASPVSVAPQPMMQLNVAPLVAPQAIPQPIEAAQAIEPKPKPLSLQQYRLLRQQKK
LAPLERLVDQSVKWPILLESPTELPPIPIPCLPTPSSRGPHPSLGKNDMEEVKAAWQPMG
PGAPPTPEALLVHPTYMQSPKSYSSSKVASANATPPQQAAVPTPQSSKASQLQPLISAMP
ASSTVKVIPPQTLSVKCCIPQAPQPALSNPLLQAQLPSLKPVALIKGAFSKTTTDAHRST
LIAPIPQKPTPVATTVPKRTLNPNAAAVCVQKPTPAAPLKVATNLQKGVVALPQPRVPEL
PTITPVSTPAKPFKTPVFKPPVRYSPAQEAPKAKSPTQELMEAFTIEIGIEAADLTSLLE
QFEETQAKEEDCVPEVSGRAAAVGNSSVAPPCDRTPVERVRAHDLTGTAGLTPPATPPHQ
MWMPLVPVALLGKSRATEAPKSSPSKAIQIDAWPLPSNKLQSKPPSPSITPTPNPVSLTL
AFSDHDYSLLQKEPMAIAREPGRRWNVKQQAAITIEPLGSNTTWVPQRIPAPSLQTLTTA
LGMKNHQAPLGPQPLDVKTDRTSSVLETPDASPTRLMDQTGPLERSPKAGRSYRGYNNTF
SPRPSPSPREGKRGRRRKRRNHRSSSPGFTDSESDSSSQSRSRSLPRKRYRPRHSDSSFS
ASSCSSSRSSSPSLDCFPRRRRYSYSSSRSRSWSRSRSRSPHRRAWGRCSRQRSPFFRPG
YRPESRENSEVVKRLKDKAIEERRVVYVGRIRETMTHKELKERFSLYGEIEECTLHLRGH
GDNYGFVTYYDTKDAFTAIENGSKLRKPDELPFDLCFGGRRQFCKTSYADLDSNREYDPS
APVTGKFDALDFDTLLKQAQKSLKR
NT seq
4038 nt
NT seq
+upstream
nt +downstream
nt
atggaatttttctctacaaatacactagacgaggtggtggatctccatgggggcctgtcc
agtgaaagcctggccagactggagctggatacaggagaggccctggaggccctccactgc
tgtttggacccctccattctgtccatctttgaggacacaccctcaggagagaataaattt
ggacttgatgaggtgaaccaggctacgctgctcacagctttgacggagatcctggataac
gtggacaatgagaacatatcacactttgacacactgtcagactccgacctactgtctggc
cagaaacatcgggaaaactctccgctgaagagaatgctgtgcttgtcctgctcgccccca
gagagagagacactttgcaacacacgacagttctccacaggaaagagtctccccaggaca
cagaagtctgtccagaggagtgacggagaggaggaagaggatggagagcaagagttcctg
aactgggatggcctgaacctgcctctcccactggctctggagcagcacatggaggaagaa
ggcgaggatggagaaagcatgtcagtgagtctaggagagctggtccgacatatgcaccct
tgctgcatggctgtgtgcatggagaatggagaaggggaagaacagatgctggcagagaaa
aggatactgctggacgtggtggaccagggagcacatcgagaatctatatttgccctccca
gatatgggcctctccctctgtcatccctctttctccttgtctggagtagaagactcgtcc
gaagcagagcagagggttccagatgaagttttggaggccgccattttggagacgccagag
tctgcgaatgatgatgtcgtagttgaggatgacccagcagaggtgaccggcccttctgac
cccgcggtgaccctgaggtcagagacaagcggtgagaaggtcatcaacaggagaccaaag
gaggagactgcagagagatgtccgtctcgtaggaaaaggaaacggaaaaacaaaatggag
aattcacctcctgaagtcacacctgaacctgaccaggcagaggggagggtcctgaggaga
gtagcccaggaatcctcgcccctcgagcctgtcaaggagacaaccaaaccaaagaaaaag
gacaagaacatgtcattaacttcctccatttctacggccgcccccgaagccccaaaacac
aagacgagtgcgacacatgccgccgaaacacaacggcagagccatgtggaagtcaccacc
ctagtaccacccacacaactcagcattaaggtcatccccgcctctgacctgttgccaatg
actatgacccctgagaaggtcacccaaccaaccacagcctgcaggaagcctcaaggcccc
ccagcttctacagctaacccaactgcccaccagatgatggaagccccccaggaaatgaca
attaaagctcccagtgccagccctgtatcagtggcccctcagccaatgatgcagctcaac
gttgcccctctagtggccccccaggcaatcccacagcccattgaggccgctcaggctatt
gaacccaaacccaagcccctgtccctccagcagtaccggctgctgcgccagcagaagaaa
cttgcccccctagagagactggtggaccagagcgtcaagtggcccatcctccttgagtcc
cctacagagctgccccccatccccatcccctgcctccccaccccctcctccagaggcccc
cacccctccctggggaagaatgatatggaggaagtgaaagcagcctggcagcccatgggg
ccaggagcacctcctacacctgaagccctgctggtgcatcctacttacatgcagtccccc
aaatcatattcctctagcaaagttgctagtgcaaacgccacccctccccagcaagcggct
gttcctactccacagtcatctaaagctagccaactccagcccctaatctctgctatgcct
gcatccagtactgtgaaggtgataccaccccagaccctttctgtgaagtgttgtataccc
caggccccccagcctgcactctcaaaccccctgctccaggctcagttaccctccttgaag
cccgtggcccttattaaaggagccttttctaaaaccactacagatgcccacaggtccacc
ttaattgctcctataccccaaaaacccacccccgtcgctactactgtacccaagagaact
ttaaaccccaatgctgctgctgtttgtgtacagaaacctacccctgctgctcctctgaag
gtggctactaatctccagaagggagtagttgctctgccccagcctagggtgcctgagcta
cctaccatcactcctgtgtctaccccagccaagcccttcaaaactccagtcttcaaacct
ccagtgaggtattctccagcccaggaggcccccaaagccaagagtcctactcaggagctg
atggaggccttcaccattgaaatcggtattgaagctgcagacctcaccagcctgctggag
cagtttgaagagacacaagcaaaagaggaggactgtgttccggaggtctctggtagagca
gccgctgtaggaaactctagtgtggcgccgccatgtgataggacccctgtggagagagtc
agagcgcacgacctgacaggcactgcaggtctgactcctccagctacccctcctcaccag
atgtggatgcccctggtcccagttgccctccttggtaagagtcgagccactgaggccccc
aaatcatcgccctccaaggcaatccagattgacgcatggcccctgccttccaacaagctt
cagagcaagccccccagcccctctataactcccacacccaatccagtgtctctcaccctg
gccttctcagaccacgactactccctccttcagaaggaacctatggctattgcaagagag
ccaggcaggcgctggaatgtcaaacagcaagcagccatcaccatcgagccacttggcagc
aacactacctgggtaccccagaggatccctgccccctccctccaaaccctcacaactgcc
ctaggtatgaagaaccatcaggctcccctaggtccccagcccctggatgtaaagactgac
aggactagctctgtgctggagacccccgatgcctctcccaccaggctgatggaccagact
ggtcccctggagaggagtcccaaggcagggaggtcttaccggggctacaataataccttc
tcccccaggcctagcccaagccccagggaaggaaagcgaggaaggaggaggaaaaggaga
aaccaccgttcctccagccctggctttactgactctgagtcagactcctcttctcagtct
agatctcgctctctacccaggaagaggtacaggccccgtcactctgatagcagcttcagt
gcctcatcttgctcctcttctcgttcctcctctccttccctggactgctttccaaggcgg
cggcgatattcctactcctcttcccgatcaagatcatggagtaggtcccgttcccgctct
ccccacagacgggcgtggggtagatgcagcagacaacgcagcccttttttcagaccaggc
taccggcctgaatctagagaaaacagtgaggtggtgaagagactcaaagataaagccatt
gaggagcgtagggttgtttacgtagggcgaatccgagagacaatgactcataaagagttg
aaggaacgcttctctctgtacggagagattgaggagtgcactttacatttaagaggccat
ggggataactatgggtttgtgacctactacgatacgaaggatgcattcacggccatcgag
aacggcagcaagctccgtaagcctgacgaactcccctttgacctttgcttcggaggaagg
agacagttctgcaagacgagctatgctgatctagattctaaccgcgagtatgacccgtcg
gcccccgtgactggcaagtttgatgcccttgactttgacactttactgaagcaggcccag
aagagtctgaagaggtaa
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