Oncorhynchus nerka (sockeye salmon): 115113452
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Entry
115113452 CDS
T07952
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115113452
Membrane trafficking [BR:
one04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115113452
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
115113452
NCBI-ProteinID:
XP_029496975
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Position
LG28:complement(45959396..45996656)
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AA seq
574 aa
AA seq
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MIRRKSSHFFERVVKKSDRRSKREKKEKPNLNGRQEGVVIDSWEDADYSIYRVTDRFGFL
HDKELPTPSAHEEKKNNLEIERVEKWLKMVKKWDKYRISDRMVKRVYKGIPLQLRGQAWA
LMLDVEKVKNENEGKYERMKEQARIFSQEIKQIDLDVNRTFRNHIMFMDRFGVKQQSLFH
VLSAYSVYNTEVSYCQGMSQVAALLLMYMNEEDAFWALSQLLTNQKHAMHGFFIPGFPKL
QRFQAHHDQILSKLIPKLKKHLDREQMSCGIYSTKWFLQCFIDRTPFTLTLRLWDIYILE
GETILTAMSYTILRIFKKRLLKMNLEDLREFLQDKIGLSFLYSDDVIIDQLQASMAELRK
MKLDLPPPAKPEELPRKVLGLELPVLLTPLKPPRGITSDLGTKRPGAGPLGLHIITHQPD
VISQDNSPSKEARKDKEALNREEEEDEEVPLPSPDPILIHTIQAQVTPDGPPQAGAGPPP
YEPPGSNEHNVMGQPAILMPLHKEISVKSSSGPVALPETQAVVQQGTNTPPQSPMEEPTL
TPPVTPLSLSPPQPPCRVPRTQSATLAQASRRPM
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaggaagagttcgcacttctttgagcgtgttgttaaaaagagtgaccgtcgc
tctaagagggagaagaaagagaagccgaatttgaatggcagacaggagggggtggtgatt
gactcctgggaggatgcagactacagtatttacagagtcaccgaccgtttcggatttctg
catgacaaggagctgccaacccctagtgcacatgaggagaagaaaaataacctggaaatt
gaaagggttgagaaatggctgaagatggtgaagaaatgggataaatacaggatcagtgac
aggatggtaaagcgtgtgtataagggtatcccactacagctgagaggccaggcctgggcc
ctaatgctggatgtggagaaggtgaagaatgagaacgagggaaagtatgagaggatgaag
gaacaagccagaatcttctcccaggaaatcaaacagatagatctggacgtgaacaggaca
tttagaaaccacatcatgttcatggatcgattcggagtcaagcagcagtctttatttcat
gtcctctctgcctattcggtctacaacacggaggtgagttactgccagggcatgagccag
gttgccgccttgctgctgatgtacatgaacgaggaagacgccttctgggccctgtcacag
ctactgaccaatcagaagcatgccatgcacggtttctttattcctgggtttcccaaactg
cagcgcttccaggcgcaccacgatcaaattctctccaaactcatccccaaactgaagaaa
catctggacagggaacagatgtcctgtgggatctacagcactaaatggttcctgcagtgt
ttcattgacaggaccccgttcaccctgactctacgtctgtgggacatctacattctggaa
ggagagacaatccttaccgccatgtcctacacaatccttagaatatttaagaagcgtctc
ctgaagatgaatctggaggacctgagagagttccttcaggacaagatcggcctgtcgttc
ctctacagcgatgacgtcatcatcgatcagctgcaggcctccatggcggaactacggaag
atgaagctggaccttccacccccagccaagccagaggaactgccacggaaggtcctgggt
ttggagctacctgttctgctcacccctctcaagccccccaggggaatcacctctgacctg
ggtaccaaacgaccaggagcagggcctctgggtctccacatcatcacccaccagccagat
gtcatctcccaagacaacagcccctctaaggaggcaaggaaggacaaggaagctctaaat
agggaggaagaggaagatgaggaagtccctcttccatctccagaccccattctcatccac
accatccaagctcaagtgacccccgatgggcctccccaggctggggctgggccaccacct
tatgagccaccagggagcaatgagcacaatgttatgggacagcctgccattcttatgcca
ctccacaaagaaataagtgttaagagctcatctggtccagtggctttaccagagacacag
gccgtagttcaacagggtacaaacacacctccacaaagccccatggaggagccgaccctg
actcccccagttacccctttatcccttagccctccacagccaccctgcagggtcccccgg
actcagtcagcaaccttagcccaggcttcccggcggcctatgtga
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