Oncorhynchus nerka (sockeye salmon): 115113487
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Entry
115113487 CDS
T07952
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1-like isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115113487
04137 Mitophagy - animal
115113487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115113487
03029 Mitochondrial biogenesis [BR:
one03029
]
115113487
Membrane trafficking [BR:
one04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
115113487
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
115113487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
7TM_GPCR_Srsx
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
EIF3I
7TM_GPCR_Srx
7tm_4
7TM_GPCR_Srbc
Beta-prop_WDR75_1st
Na_trans_assoc
eIF2A
Motif
Other DBs
NCBI-GeneID:
115113487
NCBI-ProteinID:
XP_029497080
LinkDB
All DBs
Position
LG28:48240309..48413387
Genome browser
AA seq
1655 aa
AA seq
DB search
MTVYPKNSVRILSARERGARSLGSQRLLQQLVEEKTRRMKWQSQKVELPDSPRSTFLLAF
SPDRTLMASTHVNHNIYVTVVKTGKCVHSLVGHRRTPWCLTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNEVHFWDWSRREPFALVKTASETE
RVRLVRFDPLGHYLLTAIVNPSNQQQSDDDSEVPMDSMEMPHFRHRSFLQSQPVRRTPIL
HNFLHILSSRNSGSQSEEQHPPEPAVNSAADSPSLPSGRYSTLRNRVRPPYQGCVQHLGM
VWFCSRCSPTQAPSPSGEDPSDPESLETQSYASTFSSARTEPRQPSEPRSSHRPSAFSSV
YSGARGHSSRTPSSGHQQPGRECSGRLAGADWMGSMLNMRPEHSGGVGVSPPRTSASAVS
LLSVRRQQECSYQSPVYTSATEGGSFPPAVMSPHISGNSSVDGPSTSSGHHTLGEGGSNS
PTSIRNVLQCNLNRYFMEYDRIQEMEQSGGAGGEGSQEQQTWEMPNNNIDSERPVTPHYQ
PPHSGDDGSGPFRGHVNRCRVCHNLFTFNQGTQRWERTGQTPSQEGSTSWQPPSSNPAFH
NMRQTVIQDPQSSDRRQLAQPQPSADEPGGDTAFPHRGTPSPQRERAVGLVYNQETGQWE
RVYRQSASPSPAVNVPQEALNQEMPDESPDDDYLRRRLLESSIMSPSRYDISGSRDHPIY
PDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQSRLRPLSSTSDSPGSNPSVENNEVDF
EEFEDNGDRARHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAGIFHHERGQPGLATHSSV
NRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKYNLPEISNSSVNVLVQNCKIYNDASC
DISADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLYSKRFGPNAISVSLSPMGHY
VMVGLASRRILLHHNTDHMVAQVLRLQQPHGGETSMRRMFDVVYPMAADQRRHVSINSAR
WLPEPGLGLAYGTNKGDLVICRPVDAQLDGDGPAEHSEPVFAVNNNRGGGTGGSRDGERP
GSSRAPLRSERDMGLMNAIGLQPRHPTPVVTSQGTQTPVPQLQNAETQTDRDPQVPSTFR
ASEATDSSLSNISSDVLSANLSCNDSGTNETCVVGEEEMGSPYKAVEMVFIALVTGSLSF
VTVTGNILVMLSIKVNRHLQTVNNYFLFSLACADLIIGAFSMNLYTVYIIVGYWPLGPVA
CDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLSYPARRTTKMAGLMIAGAWILSFILW
APAILFWQFIVGERTVPPGECYIQFLSNPAVTFGTAIAAFYLPVVIMMVLYIHISLASRS
RVSKQKPEAEKKKKGLKIPNPLKSHILNRQNNNNPSPKPSLESCNTGEAVKNGKIDVSVV
STKPDASVNPEEKESSNGSSTASIAPKNAKGRANSEAISEGCLGIAPAPAPAPEPAPAAA
TVKLNPASKWSKIKIVTKQAGDECITAIEIQPPIQGGETHSIPVNRPRKVARKFASIARS
QVKRKRQMAAREKKVTKTIFAILLAFILTWTPYNVMVLISTFCHSCVPDTVWAIGYWLCY
VNSTINPACYALCNATFKKTFKNLLMCQYKNIGTR
NT seq
4968 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctacccaaagaattcagtgcggatcttatctgcccgggagcgtggtgcccgc
agccttggctcccagcgcctcctgcagcagcttgttgaggagaagacccggaggatgaaa
tggcagagtcagaaagtggagttgccggacagccctcgttctaccttcctgttggctttt
agcccggacaggaccttaatggcctccacacatgtcaaccacaacatttatgtcacagtg
gttaagacagggaagtgtgttcactctctggttggccatcgccgcactccttggtgtctg
acctttcaccctaccatccctggtttggtggcttcgggatgtctggatggagaggttcgc
atctgggacctgcatggtggcagtgagagctggttcactgagagcaatgtggccattgcc
tccctggcctttcaccctaccgcccagctccttctcatagcaacaaacaatgaggttcac
ttctgggactggagtaggagggagccatttgccctggtcaagactgccagcgagacagag
agagtcagactggtgaggtttgacccactgggtcattacctgttgaccgctatagtgaat
ccctctaaccaacagcagagtgatgatgactctgaggtccccatggatagcatggagatg
ccccactttcgccatcgatccttcctacagtcccaaccggtccgccgtactcccattctc
cacaacttcctgcacatcctgtcatcgaggaactcaggctcacagtctgaggagcagcat
cctcctgaacccgctgtcaatagtgctgctgactctcctagtcttccctctggacgttat
tccaccctgcggaatcgcgtccgacccccctaccagggttgtgtgcaacaccttggtatg
gtttggttctgcagtcggtgctctcccacccaagccccttcaccatctggagaggacccc
tctgaccctgagagcctggagacccagtcctatgcctccaccttctcctctgctcgcact
gagccccggcagccctctgagcctcgctcctcacaccgtccctctgccttcagcagtgtg
tacagcggtgctagaggacactcttcacgcactccatcttcaggccaccagcagccaggc
cgggagtgttctgggcgactggcgggggcagactggatgggtagcatgctcaacatgcgg
cctgagcatagtgggggtgttggggtatctccacccaggactagtgcatcagctgtcagc
ctgctgtctgtgcggagacagcaggagtgctcctatcagtcgcctgtctacacctctgcc
acagagggaggaagctttcccccagcagttatgagcccccacatcagtggaaacagctct
gtagatggacccagcactagtagtggacaccacactcttggggagggagggagcaacagc
cccacctctatccgtaacgtgctgcagtgcaacttgaatcgctacttcatggagtatgat
cgcatacaggaaatggagcagtcaggtggcgctggtggagagggcagccaagagcaacag
acatgggagatgcccaataataacatagactctgagcggcctgtcacccctcattatcag
cccccccacagcggtgatgatggttctggtcccttccgcggccatgtgaaccgctgcagg
gtctgccacaacctgttcacgtttaaccaaggtacacagcgctgggagcgcaccggccag
accccatcacaagaggggagcacctcatggcagcccccaagctccaaccctgcctttcac
aacatgaggcagactgtgatacaggatccccagtcctctgacaggagacagttagcacag
ccacagcccagtgctgatgaacctggaggggacacagccttccctcaccggggaacccct
agcccgcagagagaacgggcagtggggttggtgtataatcaggagacaggccaatgggag
agggtttacagacagtctgccagtccaagtccagcggtgaatgtaccacaagaggcctta
aaccaagaaatgcctgacgaaagccctgatgacgattacctgagaaggagacttttggag
tcatctattatgtcgccgtctcggtatgacatatctggctcccgggaccatcccatttat
ccagatcctgccaggttgtcacctgctgcgtattacgcccagcggatgattcagtactta
tctcggcgggacagcattcgccaacgatcactgcgctaccagagccgactgcggcctctc
tcgtccacctcggatagcccaggaagcaacccctccgttgagaacaacgaggtggacttt
gaggagtttgaggataacggtgatcgcgccagacacagggctccacgcaacgctcgtatg
tctgccccctcgcttggcagatttgttccccggaggttcctactgcctgagtatctgcca
tatgctgggatcttccaccacgagaggggccagcctggcctggccacccattcctctgtc
aacagggtcctagcaggtgcggttattggtgacggtcagtcagctgtggccagtaacatc
gccaacactacctaccgcctccagtggtgggacttcaccaagtacaacctacctgaaatc
agcaactcctcggtcaacgtgctggtgcagaactgcaagatctacaatgacgccagctgt
gacatctctgcagacgggcagctcctggccgtgttcatacccagcagccagcggggcttc
ccagacgagggcatcctggctatctactctctggcacctcacaacctgggagagatgctc
tactccaagagatttggtcctaatgccatttctgtcagcctgtccccaatgggccactac
gtgatggtgggcttggcctctcgcaggatcctgctccatcacaacacagaccacatggta
gcgcaagtgttacgcctgcagcagccccatggtggagagacttccatgaggagaatgttt
gatgtggtgtaccccatggccgctgatcagcggagacacgtcagcatcaactcggcccgc
tggctcccagaacctggcctgggtcttgcctacggtaccaacaagggagacctagtcatc
tgcagacctgtagatgcccagttagacggagacggccccgctgagcacagtgagcccgta
tttgctgtcaacaacaatcgaggcggtggtactggtgggagccgcgacggagagcgacca
gggagcagcagggcccccttgaggtctgaaagggacatggggcttatgaacgccatcggt
ctccagccccgtcaccctacccccgttgtgacatcacaaggcacacagacacccgtccca
cagcttcagaatgccgaaacacagaccgaccgagatccacaggttcccagcacattccgg
gcctccgaagcaacagacagctctttgagcaacatttccagtgatgtcttgtcagccaac
ctcagctgtaatgattctggcaccaatgagacctgtgtggtgggggaggaggagatggga
agcccctacaaagccgtggagatggtcttcatcgccctggttacaggctcccttagtttt
gtcactgtcacaggcaacatcctggtgatgctctccattaaagtaaatcggcacctccag
acggtcaacaactacttcctgtttagcctggcgtgtgcagaccttatcattggtgcgttc
tctatgaacctctacactgtctacatcattgtgggctattggcccctgggacctgtagcg
tgtgacttgtggctggccctggattacgtggtgagcaatgcttctgtcatgaaccttctt
attattagctttgaccgctacttctgtgtcaccaagcccctgagctatccagccagaagg
accaccaaaatggctgggctgatgattgcaggtgcctggattctttccttcattctttgg
gcccctgctatcctgttttggcagtttattgttggagagcgcacggttccaccaggagag
tgctacatccagtttctctccaaccctgccgtcactttcggcacagccatcgctgccttc
tacctgcctgtggtcatcatgatggtgctctacatccacatctctctggccagccgcagc
cgggtgtccaagcagaagcccgaggctgagaaaaagaagaagggcctcaagatacctaac
ccactcaagagccacatccttaacagacagaataacaacaacccgtcccccaagcccagt
ctggagtcctgcaacaccggtgaagctgtgaagaatggcaagattgatgtgtctgttgtt
tccaccaagcctgacgctagtgtcaatccagaagagaaagagagttccaatggctccagc
acagccagcattgcccccaaaaatgccaaggggagggccaacagtgaagccatttccgag
gggtgccttggcattgctccagcacctgctcctgcacctgaacctgcacctgcagcggca
accgttaaactcaaccctgcctctaaatggtccaagatcaagattgtaaccaagcaggct
ggtgacgagtgcattactgccatcgagattcagccccccatccaggggggcgagacccac
tctatcccagtcaaccgcccccggaaggtggcgcgcaagtttgccagtattgcccgcagc
caggtgaagaggaagcgccaaatggcagccagggagaaaaaggtgaccaaaaccatcttc
gccatcctgcttgccttcatcctcacatggaccccgtacaatgtcatggtgctcatcagc
accttctgccactcctgtgtcccggacactgtgtgggccattggctactggctgtgctac
gtcaacagcaccatcaacccagcgtgctacgccctctgcaacgccaccttcaagaagacc
tttaagaatctcctcatgtgccagtataagaatattggaacaagatga
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