Oncorhynchus nerka (sockeye salmon): 115113497
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Entry
115113497 CDS
T07952
Name
(RefSeq) autophagy-related protein 13-like isoform X1
KO
K08331
autophagy-related protein 13
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04136
Autophagy - other
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115113497
04136 Autophagy - other
115113497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115113497
03029 Mitochondrial biogenesis [BR:
one03029
]
115113497
Membrane trafficking [BR:
one04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115113497
Atg1 complex
115113497
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115113497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
115113497
NCBI-ProteinID:
XP_029497109
LinkDB
All DBs
Position
LG28:48690542..48700918
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AA seq
512 aa
AA seq
DB search
MMDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKVCTRSLSSPTGSDWFNLAIKDIP
EVTHESKKALAGQLPGIERSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYN
RMSLLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLTGLGEGFQTVRVGVVGTP
IGTITLSCAYRTNLAFMSTRQFERTAPIMGIIIDHFVERPFGNVGHMHPCNYRAPGEDEG
AYNGVEDSQEVCTTSFSTSPPSQLYCSRLSYQSPVLVGAADFCHPSTLNAANPHQMGVPG
KEGGVPQQVPVQPCHGAQAEHRRVSSCPPADHVPATPSSSGEDAETSSRSVGVKSGSPCG
VLETTFTRKVGAFVNKPGTQVTTASLDLPFAAFAPRAYDLEENDPMVQPPESSATSSPLQ
GSLHSQGSGESGGPAQDDFVMVDFKPAFSKDDLLPMDLGTFYREFQNPPQLTSLTIDVSS
QSMAEDLDSLPEKLAVYEKNIDEFDAFVDTLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgatggacagtgatctaagtcctcaggataaaaaagacttggacaagttcataaagttt
ttcgctttgaagacagtacaggtgatagtccaagctcgacttggggaaaaagtatgcaca
cgctccttgtcttcacctactggctctgattggttcaacctggcaatcaaagatatccca
gaagttacacatgagtcaaagaaagctctggccgggcagcttcctggcatcgaacggtcc
atgtgtgttgagatctccctcaaaacctcagagggagactcgatggaattggagacatgg
tgtctcgaaatgaacgagaagtgtgacaaagatattaaagtgtcctacactgtctataac
cgcatgtcattactgctcaagtcactactggctatcacaagggtaaccccagcctacaaa
ctctcacgaaagcaagggcacgactatgtcatactgtacaggatatattttggagaggtt
caacttacaggattgggagaagggttccagacagtgcgtgtaggagttgtgggaactcct
attggaaccatcaccttatcttgtgcttacaggacaaacctggccttcatgtccaccagg
cagtttgagaggacggctcctattatgggcataatcattgaccacttcgttgagcgcccc
tttggcaacgtgggacacatgcatccatgtaactacagagcacccggagaagatgaagga
gcatacaatggggtggaggattctcaggaagtgtgcaccacgtccttctccacttctcca
ccctcacaactctactgctctcgtctttcttatcagtctcctgtgcttgttggagctgct
gacttctgccacccctctaccttaaacgctgccaacccacaccagatgggagttccaggg
aaggagggcggcgtaccccagcaggtgcctgtgcagccttgtcatggagcccaggcagag
catcgacgagtgtcctcatgcccccctgctgatcatgttcccgccacgccctccagcagt
ggtgaggacgcagagacctcgtcgaggagcgttggggtgaagagtggctctccctgtggt
gtactggagaccaccttcaccaggaaagtgggtgcctttgtcaacaagccaggcacacag
gtaaccacagcaagcctggacttaccatttgcagcgtttgctcccagagcctatgacctc
gaggaaaatgaccctatggttcagccgccggagtcctcagccacgtcctctcccctgcag
ggcagtttgcactcccaaggctctggtgagagtggaggcccggcacaggacgactttgtt
atggtggactttaagcctgcgttctccaaggatgacctccttcccatggaccttggcaca
ttctacagagagttccagaatcccccacagctcaccagcctcactattgatgtcagttct
cagtccatggcagaagacctggactctcttcctgaaaaactggcagtatacgagaagaac
attgatgaatttgatgcatttgtggacacattgcagtag
DBGET
integrated database retrieval system
