Oncorhynchus nerka (sockeye salmon): 115113502
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Entry
115113502 CDS
T07952
Name
(RefSeq) 26S proteasome regulatory subunit 6A-B-like
KO
K03065
26S proteasome regulatory subunit T5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
115113502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
one03051
]
115113502
Proteasome [BR:
one03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
115113502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
nSTAND3
RuvB_N
AAA_5
AAA_16
AAA_22
AAA_2
DUF815
Mg_chelatase
AAA_33
PhoH
DUF5827
AAA_11
ATPase
Sigma54_activat
NPHP3_N
AAA_24
IstB_IS21
AAA_7
TIP49
AAA_28
AAA_14
RNA_helicase
Parvo_NS1
Defensin
Zw10_N
Motif
Other DBs
NCBI-GeneID:
115113502
NCBI-ProteinID:
XP_029497116
LinkDB
All DBs
Position
LG28:48827627..48836960
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AA seq
427 aa
AA seq
DB search
MASLNDRSVWDEVEEGIGKEVLNMSPEELVQRTRLLGNEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKMNKTLPYLVSNIIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQAY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPAEYDSRVKAMEVDECPAEQYSDIGGLD
KQIKELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFNLAKEKAPSIIFIDELDAIGTKRFDSEKSGDREVQRTMLE
LLNQLDGFQSKIQVKVIAATNRIDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAACVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgaatgacagatcagtttgggatgaggtggaggaagggatcggcaaagaa
gtgctcaacatgtcccctgaagagctcgttcagcggacacgtcttctgggcaatgaaata
aagatcatgaagagtgaggtattgagggtaacccatgagctgcaggccatgaaggacaag
atcaaagaaaacacagagaagatcaaaatgaacaagaccctgccatacctggtctccaat
atcattgagcttctggatgtggacccaaatgaccaggaggaggatggagcaaatattgat
ctagattcccagaggaagggcaaatgtgctgtcatcaaaacatctacaagacaggcatac
ttcctcccggtcattggcttggtggatgcagagaaactgaagccgggagacctcgtgggg
gtaaacaaggactcatacctgatcctggaaaccctgcccgcggagtacgactccagagtc
aaagccatggaggtggacgagtgccccgctgaacagtacagtgacattgggggattagac
aaacagatcaaggagctggtggaagcaattgttctacccatgaaccacaaggagaagttt
gagaacctgggtattcagccacctaagggggttttgatgtatggccccccaggcacaggg
aaaaccctactggctagggcctgtgctgcccagaccaaggccacattcctcaagttggct
ggcccacagctggtccagatgttcattggtgatggtgccaagctggtccgagacgccttt
aacctagccaaggagaaggccccctccatcatcttcatagacgagctggacgccattgga
accaaacggtttgacagtgagaaatcaggtgacagggaggtacagagaactatgcttgag
ctcctcaaccagctggacgggttccagtccaagattcaagttaaggttatcgctgccact
aacaggatagatatcctagatcccgcactgctgcgttctggacgtctggaccgtaagatt
gagttcccaatgcccaatgaggaagcacgagcccgcatcatgcagattcactcacgcaag
atgaatgtcagccctgatgtcaactacgaggagctggccaggtgcactgatgacttcaac
ggcgcccagtgcaaagcagcgtgtgtggaggcgggtatgatcgcccttcgcaggggggca
actgagctcaatcatgaggactacatggaaggcatcttggaagtacaagctaaaaagaag
gccaacctgcagtactacgcctaa
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