KEGG   Oncorhynchus nerka (sockeye salmon): 115113582
Entry
115113582         CDS       T07952                                 
Name
(RefSeq) cadherin-15-like
  KO
K06809  cadherin 15, M-cadherin
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04514  Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    115113582
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:one04515]
    115113582
Cell adhesion molecules [BR:one04515]
 Cadherins
  Major cadherins
   115113582
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_FAT4_N Sde0182_C OCD_Mu_crystall Cadherin_4
Other DBs
NCBI-GeneID: 115113582
NCBI-ProteinID: XP_029497235
LinkDB
Position
LG28:53634490..53652413
AA seq 811 aa
MLAQEMASRGLAVLCVLVAGLGQVGSSGQAGREDLNPAALYPWRQRSSGGLSRVKRDWII
PPIRVLENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKNLFEIDDKTGWIRSMIP
LDREKYRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKEFAGSVYEFSVPGT
SVMSVTATDADDPTTDNAILSYSIIGQESIPLLRINKTMFGINNETGAIYTRDVGLDWEV
VKGFRLTLQVADMSGMGLTSLANAVIHVTDINNNPPRFSPDQYTMSAVENKIDFVIGWVN
ATDNDEPGTGNWETKYTIAKGNPSRNFAIRTDPVTNEGILSVVKALDYESQEVYTLTLTV
ENVNPLSIKAPKNPVSSATVVVTVVNENEAPRFIKDPIEILVPESVDPGTVLASNIAYDP
DNAKLKYDILRDPEGWLIINHETGEITARKPFNVRSPHVKNNIYNAVIRVTDTDAGGIST
TASLVITLRETNDFLPQLFPLMGTVCSESGRKTSGLFLTAVDEDLPPHAEPFTFHLQDIN
VSANWTIIQVNETHAVLRPLVELERGEYAVTVLVTDSGTPSLSAYAQVNVTVCPCGKDGE
CKTEAAAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHMKKGEGLLVGDSD
EDIRDNVLNYDEQGGGEEDENAFNIDLLRNPTDVGPLPISYYPPVPGIPRGKQPLRKDYP
DNLPSPSYPRKPPADPTDIEDFINDGLEAADHDPNIPPYDTALIYDYEGDGSLAGSLSSI
ASASSDGDQDYDYLNDWGPRFKKLANMYDPR
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgctggcacaggagatggcatcaagggggttggcagtgctgtgtgtgctggtggctggc
cttggtcaggtcgggagcagtggccaagcaggcagggaggacctgaacccagcggccctg
tatccatggagacagaggagcagtgggggtctgagcagggtgaagagggactggatcatc
cctccaatcagggtgctggagaacagcaagcaagtccctgaaaacctggtccagatcaaa
tcagacaagattttcactggagaagtgatctacaagctggaaggaccaggggttgaccag
gaccctaagaacctgtttgagatagacgataaaacaggctggatcaggagcatgattccc
ctggacagagagaaatacagaagcttcacgctgaaagcctttgccctgtcgcccagtgga
gagagactggagaatccctccaccattgagatcgtagtgctggatcaaaatgataaccgg
cccaacttctcccagaaagagtttgctggatccgtttatgaattctccgtaccaggcaca
tctgtgatgtctgtgactgcgactgatgctgacgacccaaccacagacaacgctatcctg
agctactccatcattggccaggagagcatcccgcttctccgcatcaacaagaccatgttt
ggcatcaacaacgagacaggggccatttacacacgagacgtgggtctagactgggaggtg
gttaaaggctttaggttgacactgcaggttgctgacatgtcaggcatggggttaaccagt
cttgcgaatgcagtcatacatgtgactgacatcaacaacaaccccccacgattctcccca
gaccagtacactatgtcagctgtggagaacaaaatagacttcgtgattggctgggtcaac
gccacagacaatgatgagccagggacaggaaactgggagacaaaatacaccatcgccaag
ggcaacccctctaggaactttgccattcgcacagaccctgtgaccaacgagggtattctg
tcagtggtgaaggctctggactacgagtcccaagaggtgtatactctgactctgacagtg
gagaatgtgaaccctctcagcatcaaggcccccaagaaccctgtaagcagtgccacagtg
gtggtgaccgtggtgaatgagaacgaggccccacgctttattaaagaccccatagagatc
ttggttcctgagtctgtggaccctggcaccgtgctggccagtaacatcgcctacgatccc
gataatgcaaaactcaagtatgacatactcagagatcctgagggatggcttataatcaat
cacgagactggagaaatcacagccaggaaaccgttcaatgtccgctcccctcacgtcaag
aacaacatttacaatgcagtcatcagagtcacagacacagatgctggtggaatctcgacc
acagcgtctctggtgatcacgttgcgggagaccaatgacttcctccctcagctgttcccc
ctgatggggacggtgtgcagcgagtcaggccggaagacatctggtctgttcctgactgct
gtggatgaggacctgccccctcacgcggaacccttcaccttccacctgcaagacattaat
gtgtctgccaactggaccatcatacaggtcaatgagactcatgcagtgctgcgacccctg
gtagagctagagagaggggaatatgctgtcactgtgttggtgactgactctggcacccca
agtctcagtgcatatgctcaggtcaatgtgactgtgtgtccgtgtgggaaagacggtgaa
tgtaagaccgaagctgctgccatattcggaacacgagttggtgtcagcttcatcgcctta
ctggtcatcatggccagcatcgcactcctgctgttgttgctactcctggctgtagccgtg
ggtaactgcagacggcatcatatgaagaaaggagaagggctgttggtgggggattcagac
gaagacatccgtgacaatgtcctgaactatgacgagcagggtggtggagaggaggatgag
aatgccttcaacattgacctactgaggaacccaacggatgtgggaccactcccaatatcc
tactaccctcccgtccctggcatccccaggggaaagcagccactcaggaaagactaccca
gacaacctgccctccccctcgtatccacggaaacccccagcggaccccactgacattgag
gacttcatcaatgatggcctggaggcagcagaccatgaccccaacatccctccctacgac
acagctctgatatatgactacgagggtgatggctccctggcaggcagcctgagctccatc
gcctcagccagctcagacggcgaccaggactatgactacctcaacgactggggaccacgc
tttaagaaactggccaacatgtacgacccacgctaa

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