Oncorhynchus nerka (sockeye salmon): 115113582
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Entry
115113582 CDS
T07952
Name
(RefSeq) cadherin-15-like
KO
K06809
cadherin 15, M-cadherin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115113582
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115113582
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115113582
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Sde0182_C
OCD_Mu_crystall
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
115113582
NCBI-ProteinID:
XP_029497235
LinkDB
All DBs
Position
LG28:53634490..53652413
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AA seq
811 aa
AA seq
DB search
MLAQEMASRGLAVLCVLVAGLGQVGSSGQAGREDLNPAALYPWRQRSSGGLSRVKRDWII
PPIRVLENSKQVPENLVQIKSDKIFTGEVIYKLEGPGVDQDPKNLFEIDDKTGWIRSMIP
LDREKYRSFTLKAFALSPSGERLENPSTIEIVVLDQNDNRPNFSQKEFAGSVYEFSVPGT
SVMSVTATDADDPTTDNAILSYSIIGQESIPLLRINKTMFGINNETGAIYTRDVGLDWEV
VKGFRLTLQVADMSGMGLTSLANAVIHVTDINNNPPRFSPDQYTMSAVENKIDFVIGWVN
ATDNDEPGTGNWETKYTIAKGNPSRNFAIRTDPVTNEGILSVVKALDYESQEVYTLTLTV
ENVNPLSIKAPKNPVSSATVVVTVVNENEAPRFIKDPIEILVPESVDPGTVLASNIAYDP
DNAKLKYDILRDPEGWLIINHETGEITARKPFNVRSPHVKNNIYNAVIRVTDTDAGGIST
TASLVITLRETNDFLPQLFPLMGTVCSESGRKTSGLFLTAVDEDLPPHAEPFTFHLQDIN
VSANWTIIQVNETHAVLRPLVELERGEYAVTVLVTDSGTPSLSAYAQVNVTVCPCGKDGE
CKTEAAAIFGTRVGVSFIALLVIMASIALLLLLLLLAVAVGNCRRHHMKKGEGLLVGDSD
EDIRDNVLNYDEQGGGEEDENAFNIDLLRNPTDVGPLPISYYPPVPGIPRGKQPLRKDYP
DNLPSPSYPRKPPADPTDIEDFINDGLEAADHDPNIPPYDTALIYDYEGDGSLAGSLSSI
ASASSDGDQDYDYLNDWGPRFKKLANMYDPR
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgctggcacaggagatggcatcaagggggttggcagtgctgtgtgtgctggtggctggc
cttggtcaggtcgggagcagtggccaagcaggcagggaggacctgaacccagcggccctg
tatccatggagacagaggagcagtgggggtctgagcagggtgaagagggactggatcatc
cctccaatcagggtgctggagaacagcaagcaagtccctgaaaacctggtccagatcaaa
tcagacaagattttcactggagaagtgatctacaagctggaaggaccaggggttgaccag
gaccctaagaacctgtttgagatagacgataaaacaggctggatcaggagcatgattccc
ctggacagagagaaatacagaagcttcacgctgaaagcctttgccctgtcgcccagtgga
gagagactggagaatccctccaccattgagatcgtagtgctggatcaaaatgataaccgg
cccaacttctcccagaaagagtttgctggatccgtttatgaattctccgtaccaggcaca
tctgtgatgtctgtgactgcgactgatgctgacgacccaaccacagacaacgctatcctg
agctactccatcattggccaggagagcatcccgcttctccgcatcaacaagaccatgttt
ggcatcaacaacgagacaggggccatttacacacgagacgtgggtctagactgggaggtg
gttaaaggctttaggttgacactgcaggttgctgacatgtcaggcatggggttaaccagt
cttgcgaatgcagtcatacatgtgactgacatcaacaacaaccccccacgattctcccca
gaccagtacactatgtcagctgtggagaacaaaatagacttcgtgattggctgggtcaac
gccacagacaatgatgagccagggacaggaaactgggagacaaaatacaccatcgccaag
ggcaacccctctaggaactttgccattcgcacagaccctgtgaccaacgagggtattctg
tcagtggtgaaggctctggactacgagtcccaagaggtgtatactctgactctgacagtg
gagaatgtgaaccctctcagcatcaaggcccccaagaaccctgtaagcagtgccacagtg
gtggtgaccgtggtgaatgagaacgaggccccacgctttattaaagaccccatagagatc
ttggttcctgagtctgtggaccctggcaccgtgctggccagtaacatcgcctacgatccc
gataatgcaaaactcaagtatgacatactcagagatcctgagggatggcttataatcaat
cacgagactggagaaatcacagccaggaaaccgttcaatgtccgctcccctcacgtcaag
aacaacatttacaatgcagtcatcagagtcacagacacagatgctggtggaatctcgacc
acagcgtctctggtgatcacgttgcgggagaccaatgacttcctccctcagctgttcccc
ctgatggggacggtgtgcagcgagtcaggccggaagacatctggtctgttcctgactgct
gtggatgaggacctgccccctcacgcggaacccttcaccttccacctgcaagacattaat
gtgtctgccaactggaccatcatacaggtcaatgagactcatgcagtgctgcgacccctg
gtagagctagagagaggggaatatgctgtcactgtgttggtgactgactctggcacccca
agtctcagtgcatatgctcaggtcaatgtgactgtgtgtccgtgtgggaaagacggtgaa
tgtaagaccgaagctgctgccatattcggaacacgagttggtgtcagcttcatcgcctta
ctggtcatcatggccagcatcgcactcctgctgttgttgctactcctggctgtagccgtg
ggtaactgcagacggcatcatatgaagaaaggagaagggctgttggtgggggattcagac
gaagacatccgtgacaatgtcctgaactatgacgagcagggtggtggagaggaggatgag
aatgccttcaacattgacctactgaggaacccaacggatgtgggaccactcccaatatcc
tactaccctcccgtccctggcatccccaggggaaagcagccactcaggaaagactaccca
gacaacctgccctccccctcgtatccacggaaacccccagcggaccccactgacattgag
gacttcatcaatgatggcctggaggcagcagaccatgaccccaacatccctccctacgac
acagctctgatatatgactacgagggtgatggctccctggcaggcagcctgagctccatc
gcctcagccagctcagacggcgaccaggactatgactacctcaacgactggggaccacgc
tttaagaaactggccaacatgtacgacccacgctaa
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