Oncorhynchus nerka (sockeye salmon): 115113619
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Entry
115113619 CDS
T07952
Name
(RefSeq) CUGBP Elav-like family member 3-B isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115113619
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
115113619
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Peripla_BP_4
Motif
Other DBs
NCBI-GeneID:
115113619
NCBI-ProteinID:
XP_029497313
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Position
LG28:55972384..56175630
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AA seq
516 aa
AA seq
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MATVTANGVQQENGFSTTNSAARMNGLTIGQNTIPMKDHDAIKLFIGQIPRNLEEKDLKP
LFEEFGKIYELTVLKDRFTGMHKGCAFLTYCARESALKAQSALHEQKTLPGMNRPIQVKP
ADSEGRGEDRKLFVGMLGKQQSEEDVRRLFETFGQIEECTVLRGPDGASKGCAFVKFSSH
AEAQAAINSLHGGQTMPCAYPQGASSSLVVKFADTDKERTLRRMHQMAGQLGIFSPMTIQ
FGAYGAYSHAVSLGSTGEETQMMQQQAALMAATQNSYLNPMAAIAAAQMQQMAAFNVNGL
VAAPMTPSSGTSTPPGINATALPSLAAPMGVNGFASLPPQTNGQPNNEPIYTNGIHPYPG
ETANGIHLYSAQSPTVTDPLQQAYAGVQHYAAAYPAAYAPISQAFPQQPTIIPQQQREVC
CCYFPPGPEGCNLFIYHLPQEFGDAELMQMFLPFGNVISAKVFVDRATNQSKCFGFVSFD
NPSSAQAAIQAMNGFQIGMKRLKVQLKRPKDANRPY
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtcactgcaaacggagtgcagcaagagaatggattcagcaccacgaacagc
gccgccaggatgaacgggctcacaatcggtcagaacaccattccaatgaaggaccacgac
gccatcaagctgtttatcggacagattcccagaaacctggaggagaaagatctgaagccc
ctttttgaggaattcggaaagatatacgaactcactgtgctgaaagacaggtttacggga
atgcataaaggatgtgcctttctaacgtactgcgccagagagtcagcactgaaggcccag
agcgccctccatgaacagaagactctgccagggatgaaccggcccatccaggtgaagcca
gccgacagcgaaggacgaggagaagacaggaagctgtttgtggggatgcttgggaagcag
cagagcgaggaggacgtccggcggctctttgagaccttcggccagatcgaggagtgcacc
gtcctgagagggcctgatggggccagtaagggctgtgcctttgtcaagttctccagccac
gcagaagcacaggcggccatcaacagcctgcacggcggacagaccatgccatgtgcgtat
ccccagggggcgtcctccagcctggtggtgaagtttgctgacacggacaaggagcggacc
ctgcgtaggatgcatcagatggcgggccagctcggcatcttcagccccatgaccatccag
tttggggcctatggcgcctactctcacgctgtaagtctcggctccacgggggaggagacg
cagatgatgcaacagcaagcagcgctaatggcggcgacccagaactcgtatctgaacccc
atggcagccatcgctgcggcacaaatgcagcaaatggcagctttcaacgtcaacggtctg
gtggctgccccaatgacaccctcctcaggcaccagcacgccgccgggtatcaatgccacg
gccttgcccagcctagcagcacccatgggtgtcaatgggttcgcatccctcccgccccag
accaacggtcagcctaacaatgagccaatctacaccaatgggatccacccctacccaggt
gagacagccaatgggattcacctctactcagcacagagtcctacagtgactgaccctctc
cagcaggcttacgccggtgtgcagcactacgcagcagcctaccctgccgcctatgcacca
atcagtcaagcgttcccccagcaacccaccatcatcccccagcaacagagagaagtttgt
tgttgttatttcccaccagggccggaaggctgcaacctgtttatttaccatctgccccag
gagtttggagacgcagaattaatgcaaatgttcctgcctttcggcaacgtcatctccgcc
aaagtcttcgtggaccgggcgaccaatcaaagcaagtgttttggctttgtgagcttcgat
aacccatccagtgcccaggcggctatccaggccatgaatggttttcagataggcatgaag
cggctgaaggtgcagctgaagcggccaaaggatgccaaccgaccttactga
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