Oncorhynchus nerka (sockeye salmon): 115113642
Help
Entry
115113642 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 10-like isoform X1
KO
K11841
ubiquitin carboxyl-terminal hydrolase 10 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115113642
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115113642
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115113642
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115113642
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115113642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
PAM2
Motif
Other DBs
NCBI-GeneID:
115113642
NCBI-ProteinID:
XP_029497379
LinkDB
All DBs
Position
LG28:complement(57718923..57750022)
Genome browser
AA seq
883 aa
AA seq
DB search
MASQSNVNQYIFGEFSPDEINQFFVTPRCYVELPPFNDKVSCVSQSSGSYCTPAVPYITE
SMRRQVCGEDYQHIEFGVDEVMDLEPVGVKDPLFKVSSTLNPQAPEFILGCQPSQKVPQT
AAADVPDGAHYNSLDGPDGPDGPDSEPSAMDSNQNCQDGDGGPGSLGQRERKKKKKRPPG
YYNYLEGSGPNSGGMGVDGPPGKGLVNGHALSGPHLGSQDMVGKTLSGGGLSTSAPVATA
AASAAVNQRTCDSPDESSLDFTSGAASLSDGKDAASSSSSSSQSSGVAEGGRTAEQQPEN
MAPESPELLGSGGHSPCPTSPPPPSVAVASPPATIATATTEEEEEETKDSGVANGLAEPH
ADISADGHKEASEALEQPQQQAPAPSVEPASSPDFEAQPSVSDQPKSPASTAAPAANPFK
SWASLFHNSKPLPGSPQAYVEVKNVVEVVAPSLAAVEQHEKAGEVKESPVHVSEDPMAPK
LAELIENVKLIHKPVSLQPRGLINRGNWCYINATLQALIACPPMYHLLKSIPLFNDTQRP
CTSTPMMDNFVRLVNEFNNMPVPSKAKQQAAGEKIIKDIRPGAPFEPNYIYRLLTLIKSS
LSEKGRQEDAEEYLGFTLNGLHEEMLALKKLFSPQEEKAPTPNGPESQSGVDDDVADKEG
SEDEWEQVGPRNKTSITRQADFVRTPITDIFGGHIRSVVYQQNSKESATLQPFFTLQLDI
QSEKIRTVQEALETLVARESVQGYTTKTKQEIEISRRVTLEELPPVLVLHLKRFVFEKTG
GCQKLIKNIDYPVDLEISKDLLSSGVRSKIFKGQRTYRLFAVVYHHGNSATGGHYTTDVF
HIGLNGWLRIDDQSVKVINQYQVVKQTAERTAYLLYYRRVDLL
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcagagtaacgttaaccagtacatcttcggggagttcagccctgatgagatc
aatcagttcttcgtgactccacgatgttatgttgagcttccccccttcaatgacaaagtc
tcctgcgtcagtcagtcttcaggaagttactgcactcctgctgtgccttacattacggag
tctatgagacggcaggtttgcggtgaagactaccagcacattgagtttggtgtggacgag
gtgatggacttggagcccgtgggagtgaaggatcctctcttcaaggtgtccagcactctg
aacccccaggctccagagttcatcctaggatgccagccgtctcagaaggtcccgcagaca
gccgcagcagacgtcccagacggcgcacactacaactccctggacggcccggacggaccc
gatggccccgactcagaaccctccgccatggacagcaaccaaaactgccaggatggggac
gggggcccgggcagcctgggccagcgggagaggaagaaaaagaaaaagcgcccgccagga
tactacaactacttggagggctcaggccccaatagcggtggcatgggtgtggacgggcct
cctggaaaggggttggtgaatggacacgctcttagcggccctcacctcgggtcgcaggac
atggttggtaagacgttgtcagggggtggactttccacctcagcccctgtcgctacggca
gcagcgtcggctgctgtgaatcagaggacttgtgatagccctgatgaatcgtctttggac
ttcacaagtggagccgcctctttatcagatggtaaagatgcggcctcctcctcttcctcc
tcttctcagagcagtggggtggcagagggaggcagaactgcagagcagcagcctgagaac
atggctccagagagccctgaactgctgggcagcggtgggcacagcccctgccccacctcc
cctccccctccctcagttgctgtggccagcccccctgccaccattgctactgctactact
gaagaagaggaggaggagactaaggacagtggggtggctaatgggttggctgagccccat
gctgacatcagtgcagacggacacaaggaggcctctgaggcattggagcagccccagcag
caggccccagctccctcagtggaacctgcttcctccccagactttgaggcccagccgtca
gtgtcagatcagcctaagtcgcctgcctctacagctgcgcccgctgctaaccccttcaaa
tcctgggctagcctcttccacaactccaagcctctgcctggaagccctcaggcctacgtg
gaggtgaagaacgtggtggaggtagtggctccctccctggccgccgtggagcagcatgag
aaggctggggaggtgaaggaaagccctgtccatgtatcagaggatcccatggcccctaaa
cttgcagaactaattgagaatgtgaagttgatacacaaaccagtgtctttgcaaccaaga
ggactgatcaacaggggaaactggtgctatatcaatgctacattgcaggccctgattgct
tgcccccccatgtatcacctgttgaagtccattccgctgttcaatgacacccagagaccc
tgtacttccacacccatgatggacaactttgtaaggcttgtcaatgagttcaacaatatg
cctgtgccatccaaagccaagcagcaagctgctggtgaaaagataataaaagacattcgc
ccaggtgctccttttgaacccaactacatctacagactcctcaccctcatcaaatcgagt
ctctcggagaagggtcgacaggaggatgcggaggaatacctgggtttcaccctcaatgga
ctacatgaggagatgctggctttgaaaaagctcttctcccctcaggaagagaaagccccc
acacccaacggcccagagtcccagtcaggtgtggatgacgatgttgctgataaggagggg
agcgaggacgaatgggagcaagtgggcccccgaaacaagacctccattacgcgtcaagct
gactttgtccgcacccctatcactgacatattcggagggcacatccggtcggtggtgtac
cagcagaactctaaggagtcagccaccctgcagcccttcttcaccctgcagctggacatc
cagtcagagaagatccgcaccgttcaggaggccctggagaccctggtggcacgggagtca
gttcagggctacacaactaaaaccaagcaggagattgagatcagccggagagtgacccta
gaggagctccctccagtgctggtgctccatctcaagagatttgtgtttgagaagactgga
ggctgtcagaaactgatcaagaacattgattaccctgtagacctggagatcagcaaagat
ctcctctcttcaggggtgcggagtaaaatattcaaaggccaaagaacctacaggctcttt
gcagttgtctatcaccatgggaacagcgctacaggcggccattacaccacggatgtcttc
cacatcggtctgaacggctggctgcgcattgacgaccagtcagtgaaggtcatcaaccag
taccaggtggtgaagcagactgctgagcgcactgcctacctgctgtactaccgtcgcgtc
gacctgctctag
DBGET
integrated database retrieval system
