Oncorhynchus nerka (sockeye salmon): 115113644
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Entry
115113644 CDS
T07952
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115113644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115113644
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Others
AP-1 complex
115113644
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
Kinetochor_Ybp2
Ltn1_1st
Motif
Other DBs
NCBI-GeneID:
115113644
NCBI-ProteinID:
XP_029497383
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Position
LG28:complement(57820330..57850274)
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AA seq
822 aa
AA seq
DB search
MRMPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHM
LGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYV
QGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPA
TKNLLSEKNHGVLHTSVVLLTEMCERSPDMLLHFRKNEKLVPQLVRILKNLIMSGYSPEH
DVSGISDPFLQVRILRLLRILGRSDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLT
IMDIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK
DLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCDPEFKADCASGVFLAAEKYAPSK
RWHIDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQV
SSWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDVLEGLLVSNLSTPVTRGYSLTAIMKLST
RFSSVNRIKKVVSIYGSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKTASNGPT
EIVQTNGETEPSVPDTKHPPLVTQPANQANDLLDLLGGNDVVPVIQTILPTKPASAGGEL
LDLLGDLSLSSGPAPAPSVPISQPPFLLDGLSSQPLFNDISAAIPPMTAYSKNGLKIEFT
FERANPNPNIAVITIHATNTTEADMTEFVFQAAVPKTFQLQLLSPSSNIVPALNQGSVTQ
VIRVLNPQKQQLRMRVKLTYTHKGSPVQDLAEVNNFPPQSWQ
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgaggatgccagcgccgatcagactgcgggagctgatccggaccatccggacggctcgg
acccaggcagaggagcgtgagatgatccagaaagagtgtgctgctatacgctcgtccttc
agagaggaagacaacacttaccgctgtagaaatgtggctaagctactctacatgcacatg
ctgggctacccagcgcactttgggcagcttgagtgcctgaagttgattgcgtcccagaag
ttcactgacaagcggatagggtacctgggagccatgctactgttggacgagaggcaggac
gtccatctactaatgacaaactgcatcaagaatgatctgaatcacagcacacagtatgtc
cagggcctggccttgtgcaccctgggctgcatgggctcctcggagatgtgtcgagacctg
gctggagaggtggagaagctgctcaaaacatccaactcctacctgaggaaaaaggcggcg
ttgtgtgcagtccacgtcatcaggaaggtcccagagctgatggagatgttcctcccagcc
acaaagaacctgctgagtgagaagaaccacggtgttctccacacttctgttgtcctcctc
actgaaatgtgtgaaagaagtcctgacatgctcttacacttcagaaagaatgagaagttg
gttccacagctagtgagaatcctgaagaacctgatcatgtctggatactctcctgagcat
gatgtgtctggcatcagtgaccccttcctgcaggtgcggatattgagactattgcgaatt
ctgggcaggagtgatgacgactcaagtgaagcaatgaatgacattcttgcacaggtggca
accaacaccgagaccagtaaaaatgtaggcaatgcaatcctctacgagacagtactgacc
ataatggacatcaagtcagaaagtggattgagggtgttggctatcaacatactgggacgc
ttccttctcaacaatgacaaaaatattagatatgtggcactgacgtccctactgaagact
gtacagacggaccacaatgcagtgcagaggcatcggagcaccattgtggactgtctaaaa
gacttggatgtgtccatcaagaggcgtgcgatggagctgagcttcgccctggtgaatggg
aacaacatccgaggcatgatgaaggagctgctctacttcctggactcctgtgacccagaa
ttcaaagcggactgtgcatccggagtctttctggctgcagagaagtatgcgccttcaaaa
agatggcacattgacaccatcatgagagtcctgacaacggcggggagctatgtccgagac
gactctgtccccaacctcatccagctcatcaccaacagtgtggagatgcatgcctacacg
gtgcagagactctacaaagccctgctggatgacatctcacagcaaccactggtccaggtg
tcatcctggtgtataggggagtatggagacctgctggtatctggacagtgtgaggaggag
gagcccatccaggtgacagaggatgaagtcctggatgttttggaaggtcttcttgtgtcc
aacttgtccacccctgtaacccgtggttactccctcactgccatcatgaagctgtctact
cgcttcagcagtgtcaaccgaatcaagaaggtggtgtcaatatacggcagcagcatcgac
gtggagctgcaacagagagctgtggagtacaatgcacttttcaagaaatatgatcacatg
aggcctgccttactagagcgaatgcccatcatggagaaaacagcctccaatggccctaca
gagattgtgcagaccaatggggagacagagccctcggtgcctgacacaaaacacccgccc
ctagtcacccagccagccaaccaggctaatgacttgttagacctgctgggaggtaatgat
gtggtgcctgtgatccaaaccatcctgcccaccaagcctgcctcggctggaggagagctg
ctcgacctattgggggacctctcactgtctagtggtccagctcctgccccctctgtgccc
atctcccagccccccttcctcctggatggcctctcctcacagcccctgtttaatgatatt
tcagcagctattccccccatgacagcgtatagcaagaatggcctgaaaatagagttcacc
tttgagagggccaatccgaacccgaacatagcagtcatcactatccacgccaccaacacc
actgaggctgacatgacagagtttgttttccaggctgcagttccaaagacattccagctg
cagctcttgtcccctagcagtaatattgtcccagcactcaaccagggaagcgtcacacag
gtcatcagagttctcaacccacagaagcaacaactccgcatgagggtcaagctgacgtac
acccacaaaggctcacctgtccaagatctggccgaggtcaacaacttccctcctcagtcc
tggcaatga
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