Oncorhynchus nerka (sockeye salmon): 115113654
Help
Entry
115113654 CDS
T07952
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like isoform X1
KO
K14849
ribosomal RNA-processing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115113654
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115113654
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115113654
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115113654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
115113654
NCBI-ProteinID:
XP_029497410
LinkDB
All DBs
Position
LG3:58099924..58105660
Genome browser
AA seq
1022 aa
AA seq
DB search
MAPVQQEPEIQFAQRLASNERPMRTKAIKKLRKYIRVRSQKIQGGFEGEELLKLWKGLFY
CLWMQDKPLLQEELSNQISGLIHSFQNIQSQFMFLETFLQTVKREWTGIDRLRMDKFFQL
VRFVFRNTFEMMKRKEWETSVVTRFLELLTAQVLHSSSGAPCGLQFHILDIYMTELAAVG
SAELTAAQNMTFIDPFCKTASKTKDRILLRAICSSIFSAIVDQAPFAIEDLLKEVKATGG
GAEESDSGQASEEEEVEKDPPKGKKNAKEALKKTTGGQTNGTVSTEEEDDDDEDGLGDED
DDEMLHMESDSESEMPDGAGIGPVLQFDYLSLADRLFGLARRSNTPSHNRQRLYKVVKTL
RDLSEGVFPQDEYPEEVSTDEDDDEMFGSRKRMKRGRGFGEEEEESSPAKKWKGKKKDSK
ARTSDQTAATDDSKPAETPGDSNNKKKKKKRRKKKKTGEVKTEEQNGVAAKSEVKVEKDT
TPASAPQTTDSKEAETEPSIPAKGTDTGASLLKEKAKVTAMETGVQSGTPQDVVVGNLSS
VTVMEVDQKKQSETPVPDATSSKKKNIKKSKTPAPKQKEEVAEPAKSAPETATTTPSRRK
NTKQEPEEQTTVEEVEMALETVDKTTATPPKKRRRRRNKVKRTAETDTTQVDLEPDSTPA
EEPPVDLRIAATPLKKKKLKVAKAGEESAGGEIRPETEADVLVVDTKVEPACVATSTPLK
KKKKKHAKAEEQSVEAESETPPKADANLTLIDAEVQTLEATTPTPLKKKKRAKAEVQTLE
AATPTPLKKKHAKAEVQTLEAATPTPLKKKKSSGLVAQELETTTVEESVSEEQPTDADPD
TPLKKGKKKRKVPVVIEFEAEVNGMAGGKKAKLSNDSKELSTPVRAKKNKKMTPKKAGAE
SDFITFQNHATIPTPLFFKTTKGSPSTQLSSKKKKCQTPKSESKKVTFGLNKNKTAGSPE
FRKTDRSLLVSPEGSSRVPFDPQQKPLFGVLKSPEASLTKSTKKTKSTLKTTPKRPTAAD
FF
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggtacaacaagaaccagagatccagttcgctcaaagattggcttctaatgag
aggcccatgcgaacaaaagccatcaagaagctaagaaaatatattcgtgttaggtcacag
aaaatccaaggtgggtttgaaggtgaggagttactcaaactatggaaaggcctcttttat
tgcttgtggatgcaggacaagccacttcttcaggaggagctgtcgaatcagatctctggc
ctgatacacagcttccagaacatccagagccagtttatgtttctggagacctttctgcag
accgtcaaaagagaatggaccggcattgacaggcttcgcatggataagttcttccagctg
gttcgtttcgtgttcaggaacacttttgagatgatgaagaggaaagaatgggagaccagt
gtggtgaccaggtttctggagctcctgactgcccaggtcctccacagctccagcggagct
ccctgcggattacagttccacatactggacatctatatgaccgagctggctgcagtcggc
tcagctgagctcacagcggctcagaacatgacattcattgaccctttctgcaaaacagcg
tctaaaacgaaagatcggatcttgctcagggctatctgcagcagcattttcagcgccatc
gtggaccaggctcccttcgccatcgaagacctgttgaaggaagtgaaggctacaggtgga
ggggctgaggagtccgactcgggacaggcttctgaagaggaggaggtagagaaggatccc
cccaaaggcaaaaaaaacgcaaaggaagccctcaagaaaaccactggagggcagaccaac
ggtactgtatcaactgaggaagaagatgatgatgatgaagatggtctgggcgatgaagac
gatgacgaaatgcttcatatggagagtgactctgagtctgagatgccagatggcgcgggg
atcggacctgttctccagtttgactaccttagcctggcagacaggctgtttgggctagcc
agacgcagcaacacccctagccacaacagacagagactgtacaaagtcgtcaagactctc
cgggatctcagtgaaggagtctttccacaggatgagtacccagaggaggtgtcgacagat
gaggatgatgatgaaatgtttggcagcagaaagaggatgaaacggggacgaggcttcggg
gaggaagaggaagagagctcaccagccaagaaatggaaaggcaagaaaaaagactccaaa
gcaagaacgtctgaccagactgccgcaacagatgacagtaaaccagcagagactcccgga
gactccaataacaagaagaagaagaagaagaggaggaagaagaagaagactggagaggtg
aagactgaagagcagaacggggtggcggcgaagtctgaggttaaggttgagaaggacaca
actcctgcttctgcaccgcagacgacagactctaaagaagcagagacggagccctctatc
ccagccaagggcaccgatacaggagcgtctctcctgaaggagaaggcaaaggtgacagcc
atggagacaggggtccaatcaggaactccacaggatgtagtggtaggtaacctgtcatct
gtcacagtcatggaggtagaccagaagaaacaatcagagactccggtaccagacgccaca
tcttccaagaagaaaaatatcaagaagtccaaaacgcctgcaccgaagcagaaggaagag
gtagcagaaccagcaaagtctgcccctgagactgctactaccaccccaagcaggaggaaa
aataccaagcaggagcctgaggagcagacaaccgtagaggaagttgaaatggcgttagaa
acagtagacaagaccacggccaccccaccgaagaagaggaggaggaggaggaacaaggtt
aaacggaccgctgagacagacacaacacaggtggaccttgaaccagactctaccccagcc
gaggagcctccagttgacctccgcatcgccgccactcccctgaaaaagaagaaacttaag
gtggcaaaggctggagaggagagcgccgggggtgaaatacggccagaaactgaagcagac
gtcctggttgtagacaccaaggtggagccagcatgtgtcgctacatcaaccccgctcaag
aagaagaagaagaaacatgccaaggctgaagaacagagtgtggaggccgaaagtgaaacc
ccgccgaaagcagacgcaaacctcacactgatcgacgctgaggtacagacgctggaggcc
accacacctaccccactcaagaagaagaaacgtgccaaggctgaggtacagacgctggag
gccgccacacctaccccactcaagaagaaacatgccaaggctgaggtacagacgctggag
gccgccacacctaccccactcaagaagaagaagagctctggactggtagcacaggagcta
gagaccacgacagtggaggagagcgtgtcagaggagcagcctacagatgctgacccggac
acgcccctgaagaaagggaagaagaagaggaaggtcccggtagtgatagagttcgaggct
gaggtcaacgggatggctggaggcaagaaagccaaactgagcaacgacagcaaagaactg
tccacgccggtgagagccaagaaaaacaaaaaaatgacacccaagaaggcaggggcggag
tctgacttcatcacgttccagaaccatgccaccatccctactccccttttcttcaagacc
accaagggaagccccagcacacagctatccagcaagaagaagaagtgtcagactccaaag
tccgaatccaagaaggttaccttcggactcaataaaaacaaaactgcaggatccccagag
ttcaggaagactgaccgcagcctgctggtgagtccagaggggtcgtcccgagtgccgttt
gacccccagcagaagcccctgtttggggtcctgaagtccccagaggcctctcttaccaaa
agcactaagaagaccaagagcaccctgaaaaccacccccaaacgccccaccgcggctgac
ttcttctag
DBGET
integrated database retrieval system
