Oncorhynchus nerka (sockeye salmon): 115113662
Help
Entry
115113662 CDS
T07952
Symbol
rfx7
Name
(RefSeq) DNA-binding protein RFX7 isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115113662 (rfx7)
Transcription factors [BR:
one03000
]
Eukaryotic type
Other basic domains
RF-X
115113662 (rfx7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
115113662
NCBI-ProteinID:
XP_029497427
LinkDB
All DBs
Position
LG28:58506224..58546328
Genome browser
AA seq
1460 aa
AA seq
DB search
MTEDQQQHDQHPKLGSGISTLPSLVPGLQGTEASALQLKIKNSICKSVQSKVDNILQDVE
TFTDIEKLYLYLKLPSGPSNSEKRTERGSASPGELSCSDQSSMSSSRTQQMHAFNWIRSH
LEEYPETSLPKQEVYDEYKSYCDNLCYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYC
YSGLRKKAFVHMPSLPNLELHKTGDGCEVLEASGQLCSAEEEVRSAACGLVCEWAQKVLS
RQFDAVEDLARFLLNSHYIGTKSVAALTVMTGTPTGVKTPLPSSAFAPTAEAHSFQSQVK
TLPSPSIDAKQQLQRKIQKKQQEQMLHSPLPGEAQARRADGGTPGVGSITCRSPALLSPH
PTIGIMVAAVPSPITVQRSRQLMSPSPVGTSEGKILPVNFQVVTQSMQPVKCPKTPQNIP
ASPVGDRSARHRYAQILPKPSATSAITLRSPPTLLITNSPIKTVMQPTPHISSVNVVKMT
TISLAPNCSTTTTLTNTTLRPASAGMGSTVALEESRPSPRARSGSAAPILSPLARSGWAT
TTPTIDIKMIEGEAISEGSLALGASRLTMTQEAAGGQRAGGAVPRAASVPMPHTKGSLGL
EAMAGTNCNGKSSLRNNTVAATAGSNNNTNNESTLYLTVSNQNTSTTLSPNGGTVATSLI
ASKSPRKRPGVGPESYPTPVKRVFISQQPLGGSDGYRHGIGAGVKKLPRTGTPVRPESAP
AIGKVTVKLNSTVPTRILSLSDSPIGTRGFQTVVKPQSSMQRRDTPITMDTSSIGNVSAP
AGHARIQHQQHMTGNMQAMPNSSALLEQSAVSDLRNTMWVGGQLEGGKLQQQQAYAQQIT
DHKQASTQVMEPLAMMGQAPASSQLSMQTNMDYFHFNDDDMTQDSIVEELVQMEEQMKLN
SSLQAFGADVTLQGHQSVMQGNMMSSNQTMTPYYQSVHSSTTPVQTPTPTPTSTSEMMGG
GQGLTRESPCSHMAPTTPVDSALGSSRHTPIGTPHSNCSGSVPPSPVECRNPFAFTPINS
SITGYHDGSIVSSSPVKPMQRPMATHPDKAKLEWMNNGYNKSGGNSINGISILPSYQDLV
DDHFRKPHAFAIPGQSYQSQTRHHDGHYGRLTPISPVQQQAASMANLNKQESFAVPAPLD
NKTTSTSSAGGTFRCRSVSPAVRQRNLSGNQSGNIPRTVVSPFTSPVTPEMINIFANSHG
DVSSMAQRSQSVPVNVMMQTEVLPMQGQTNSKKITNVLLSKMDGDSDDAVRGLGINNLPS
NYTARMNLTHILETTPSFPRSANHQTLMTSNTQNAYEFQKPGYLMKNSRNEQMILSAGDS
QAQSATGEQQHQQSQPMLLAQNLQQQQQQLQLDFSTTVKDLLADGSLTPGNQLVGQVSEL
NPVGSDFRLTSDLSSSINDLNNLDTNLLFDPNQQQGQYEDSTLEELKNDPLFQQICSETA
NSNGFDWLESKDQPTVGLMG
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggatcaacaacaacatgatcagcacccgaagctgggctctggaataagcacc
ttaccatccctagttcctggactgcaagggactgaggccagtgcgttgcagctcaaaata
aagaattccatctgtaaatctgtacagtcaaaggtggacaacattttgcaagatgtggag
acgtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccagcaac
agtgaaaaaaggactgagagagggtctgccagtcctggagaactgtcatgcagtgatcag
agctccatgtcatcaagccgcactcaacagatgcacgcgttcaactggattcgcagtcac
ctagaggaatacccagaaacctctctgcccaaacaggaggtctatgatgagtacaagagc
tattgtgacaatctctgctaccacccactgagtgcggcggactttggaaagatcatgaaa
aatgtatttccaaacatgaaggcacgtcgacttggcatgagaggcaaatcaaaatactgc
tatagtggactgaggaagaaagcctttgtccacatgccatctttacccaacctggagtta
cataaaacaggggacgggtgtgaggtgctggaggcctcaggtcagctgtgcagtgcggag
gaggaggtgcgctctgcggcctgtggcctggtgtgtgagtgggcccagaaggtgctgagc
cgccagtttgatgctgtggaggacctggctcgcttcctgctcaacagccactacatcggc
accaaatctgtggcagccctcacggtcatgactggtacaccaacaggagttaaaacgcca
ctgccatcctcagcattcgcaccaacagctgaagcccactccttccagtcccaagtgaag
accctgccctctccctccatcgatgccaagcagcagctccagcggaagatccagaagaag
cagcaggagcagatgctgcactcccccctccccggagaggctcaggccaggcgggctgac
gggggcacgcctggggtcggctccattacctgtagaagcccagccctgctctccccacat
cccaccattggcattatggtagctgcagtccccagccccatcacggtacaaaggagcaga
caactgatgtcccccagtcctgtgggaacatcggagggcaagattctgcctgtcaacttc
caagtggtgacccagtcaatgcagcctgtcaagtgtcccaagacccctcagaatatccca
gccagccctgtgggggaccgctctgcccgccaccgctatgcccagatcctgcctaaaccc
tcagccaccagcgccatcaccctgcgctctccccccaccctgctcatcaccaacagcccc
atcaagaccgtgatgcagcccacaccccacatcagctctgtcaacgtggtcaagatgacc
accatatccctggctcccaactgcagcactacaacaaccttaacaaacaccaccttaagg
cctgcctctgctggcatgggcagcactgtagccctggaggagagcagacccagcccacgg
gccaggagtggctctgcagcccccatcctgtcccccttagccaggtcaggctgggccacc
accacccctaccatcgacatcaagatgattgagggtgaagccataagtgaaggcagtctg
gccctgggtgctagcaggcttactatgactcaggaagctgcagggggccagagggctgga
ggagctgtaccaagggctgccagtgtgcccatgcctcacactaaaggctccctgggactg
gaggcaatggctggaaccaattgcaatggcaagtcctctttgcgcaacaacactgtggca
gctacagctggtagcaataataacaccaataacgaaagtactttgtatttgacggtctcc
aatcagaataccagcaccactctgtcacccaatggtggcactgttgccacatcactcatc
gcctccaagagccccaggaaacgcccaggcgtcggcccagagtcttatcccacgcctgtc
aaaagggtcttcatctcccagcaacctcttgggggctccgatggttacagacatgggatt
ggtgcaggagtgaagaaactccccaggacaggaaccccggtcagacctgaaagtgcacca
gccattggtaaagttactgtgaaactgaactccactgtcccaactcgaatcctgtcactc
tctgattcccccatcggaaccagaggcttccagactgttgtcaagccacagagctccatg
cagagaagagacactccgatcaccatggacactagcagcatcggcaacgttagtgccccg
gctggtcatgcacgaattcagcaccagcagcacatgacgggtaacatgcaagccatgccc
aacagctctgccctactggagcagtctgctgtgagtgacctgaggaacaccatgtgggtt
gggggccagctggagggaggtaaactacagcagcagcaggcctacgcccagcagatcaca
gaccacaagcaggcatccacacaggtcatggagcccctggccatgatgggccaggcccca
gcctctagccagctctccatgcagacaaacatggactacttccatttcaatgatgacgat
atgacccaggacagcattgtggaggagctggtgcagatggaggagcagatgaagctcaac
agcagtctgcaggccttcggagctgacgtgacgctgcaaggccatcagtctgtaatgcag
ggcaacatgatgtcctccaaccagacaatgaccccttactaccaatcagtacacagcagc
accacccctgtccaaactcctactccaactcccacatccacctctgagatgatgggagga
ggccagggcctgactagggagagcccctgctcccacatggcccccaccaccccagtggac
agtgccctggggagcagccgacacacccccatcggcactccacactccaactgcagcggt
agcgtgccccccagccctgtggagtgcaggaacccctttgccttcactcccattaactcc
agcattacaggctaccacgacggcagcattgtctccagcagccccgtcaagcccatgcag
aggcccatggctactcacccagacaaggccaaactggagtggatgaacaatggttacaac
aagagcggggggaactccatcaacggcatcagtatcctccccagctatcaggacctggtc
gacgaccacttccgaaagccccatgccttcgccatccctggccagtcctatcagtctcag
acgaggcaccacgacggacactacggccgcctgacacccatctctccggtgcagcagcag
gcagccagtatggccaacctgaacaagcaggagagcttcgctgtgcccgcccctctggac
aacaagaccaccagtacatcttcagcaggcgggaccttccgctgtcgtagtgtaagccct
gccgtgcgccagcgaaacctgagtggcaaccagagtggcaacatcccccgaacagtggtg
tcccccttcacctcccccgtgacccccgagatgatcaacatcttcgccaacagccatggg
gacgtcagcagcatggcacagaggagccagtctgtgcctgttaacgtgatgatgcagacg
gaggtgctgcccatgcagggccagaccaacagcaaaaagatcaccaacgtgctcctgagc
aagatggacggggacagtgacgacgcggtgcggggcctgggtatcaacaaccttccgtcc
aactacacagcccgcatgaacctcacccacatcttagagaccactcccagcttccccaga
agtgccaaccatcagactctgatgacttccaacactcagaatgcgtacgagtttcagaag
cctggttacctcatgaagaactctaggaacgaacagatgattctctcagcaggtgacagc
caagcacaatcggctactggagaacagcagcatcagcagagccagcctatgctgctggcc
cagaaccttcagcagcaacaacaacagctgcagctagatttcagcaccaccgttaaagac
ctcttagcggacggcagccttactcctggcaatcagcttgtgggacaggtgtcagaactc
aaccctgtggggtctgattttcgactgacctctgatctttccagtagcatcaatgacctg
aacaatttggacacaaaccttctgtttgaccccaatcagcagcagggacaatacgaagac
tctacactggaagaactgaagaatgatccgctgttccagcagatttgcagcgagactgcg
aattccaatggatttgattggctggaaagtaaagaccagcccacagtcgggttaatgggt
taa
DBGET
integrated database retrieval system
