Oncorhynchus nerka (sockeye salmon): 115113693
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Entry
115113693 CDS
T07952
Name
(RefSeq) plakophilin-3-like isoform X1
KO
K28841
plakophilin 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04382
Cornified envelope formation
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115113693
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115113693
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GFIT
Motif
Pfam:
Arm
ARM_ARMC5
Atx10homo_assoc
ZER1-like_2nd
WRM1_C
BAR1_C
DUF8079
Motif
Other DBs
NCBI-GeneID:
115113693
NCBI-ProteinID:
XP_029497483
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Position
LG28:59721594..59738130
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AA seq
813 aa
AA seq
DB search
MSATVASESCFLSALQPNTAVTTYAVPSDVQLGPRGSIMDEVERAKRVQQQVHLRLAEKR
SSSLTRLNGSNCISPDHGGTMRYNTYNPGFSSKSMVYNTGSRIMKMPPVSQQYLGGRYSS
LSAVELGPRYRISQPPVNTGYLHHDDIQLGGYQTSQKRTTRSRSVCQADQEAVVQGVGGL
LTLRHQQQNPVASWVARDGMATEFHSYHGGGIPAPATMRRTLSGTLAGGGSGGWREAELV
YQHSYKGPAHRTISRINNRQQQQQHLSSASGLQQWQQVSGGGGGSVYGGWGQYQNSLPRP
ASLNSMKSMGKGMDVPDGGRDSADSNEKLGGMHSLDMPTAVNYLSMSDTAMQVLGAAYIQ
HQCYHSSDAKNQVRLLKGVPALVQLFSSDSQEVQRYATGATRNLIYENMDNKAALIEAGG
VAKLISVLKEPDEELRKNITGILWNMSSKDSLKEKLARETLSELTERVLVPLCSGGDSEL
IRQSPSEADIFYNTTGCLRNLSSVNERTRQQMRDMRGLVDSLVAYIQNSLQDEKAEDKGV
ENAVCVLRNLSYQLYSEIPPSTLLRLEGPTRARATTETESIGCFTPQSKKAKERQNQELS
TFSEVAKQPKGAEWLWHPQVVGLYNRVLQHYETNTATREAAAGALQNITAGETRWASVLS
WVALEQERMLPVVLDLLQTQSDQEMRSLTGLLRNLSRHSRNKDDMATKVVNILVTKLPSD
GHQKEPSSEVVVNICGTLNNLVAGSSLAARDIAFFDGLPKLVAIKSSHDNSSGKLKAAKA
ASTVLFNMFQYNKLHKDYKQKGFTRCDFTDTAI
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgaccgttgcatcagagagctgctttctgtccgccctacagcccaacaccgcg
gtcaccacatatgcagtcccgtccgatgtgcagttgggaccgaggggttccataatggac
gaggtggaaagggctaagagggttcaacaacaagtccatctgcgcctcgccgaaaagagg
tcttcatccctcacacggctgaacggctcgaactgcatttccccagaccatggtggcaca
atgagatataacacgtacaaccccggattcagctctaagtcaatggtgtataacacaggg
agtaggatcatgaagatgcccccggtatcccagcagtacttgggaggtaggtactcatct
ctctcagcggtggagttaggacccagatacagaatcagccagcctccagtcaacactggc
tacctccaccatgacgacatccagctgggtggctaccagaccagccagaagaggaccacc
aggtccagatcagtttgtcaggctgaccaagaggcagtggtccagggtgtgggaggcctg
ctcaccctgcgccaccagcagcaaaacccagtggccagctgggtggcccgtgatggcatg
gccacagagttccactcctaccatggtggaggtatacctgccccagcaacgatgaggcgc
acactcagtggaaccctggcggggggtggtagcggtgggtggagagaggcggagctagtt
taccagcactcctacaaaggccccgcccaccgtaccattagtcgcatcaacaacagacaa
cagcagcagcaacatctgagctcagcgtcggggctgcagcagtggcagcaggtttctggc
gggggcggtggcagtgtgtacggaggctgggggcagtaccagaactccctgcctcgaccg
gcctccttgaacagcatgaagagtatggggaaaggcatggacgtgcctgatgggggcagg
gattcagctgacagcaacgagaaactcggaggaatgcacagtttagacatgcccaccgcg
gtcaactacctctccatgtccgacacagccatgcaggtgctgggagcagcctacatccag
caccaatgttaccatagcagtgatgccaagaaccaggtgcgtctgctgaagggtgtccca
gccctggtgcagctcttcagcagtgacagccaggaggtccaacgctacgctacaggcgct
acacgcaacctcatctatgagaacatggacaacaaggcggccctcattgaggctggggga
gtagccaagctcatcagtgtcctgaaagaaccagatgaggagcttcgcaagaacatcact
ggtattctgtggaacatgtcctctaaggacagtctgaaggagaagttggccagagagaca
ttgagtgagctcacagagagggtgctggtgcctctgtgcagtggtggagattcagagctg
atccgtcagagtccatctgaagcagacatcttctacaacaccacaggctgcctgaggaac
ctgagctcagtgaatgagaggacgaggcagcagatgagagacatgcgagggctggtggac
tcgctggtggcctacatccagaactcccttcaggatgagaaagcagaggacaaaggtgta
gagaatgcagtgtgtgtcctgaggaacctgtcttatcagctgtacagtgagatccctccc
tcaaccctactgcgcctggaggggcctacgcgggccagagccactactgagactgagtcc
attggctgtttcaccccacagagcaagaaggcaaaggagcgacagaaccaggaactgtcc
accttctcagaggtggctaagcagccaaagggggcggagtggctgtggcacccccaggtg
gtggggctgtataaccgcgtgcttcagcactatgagaccaacacggcaacacgagaggct
gcagcaggggccctgcagaacatcacagccggagagaccaggtgggcgtcagtgctgagt
tgggtggctttagagcaggagcggatgctgcctgtggtcctggacctcctgcagacacaa
agtgaccaggagatgcgttccctcactggcctcctgaggaacctgtcccgacacagcaga
aacaaggacgacatggctacgaaggtagtgaacattctggtgaccaagctccccagtgat
ggccaccagaaggaaccatccagtgaagtggtggtcaacatatgtgggaccctcaataac
ctggttgcaggcagctcactagcagcgagagacatcgccttctttgatggactccccaaa
cttgttgcaattaagtcttcccacgacaacagctcagggaagctgaaggctgccaaggct
gcttccacagtactcttcaacatgttccagtacaacaagctgcataaagattataaacag
aaagggttcacgaggtgtgacttcaccgacacggccatttag
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