Oncorhynchus nerka (sockeye salmon): 115113705
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Entry
115113705 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: myosin-binding protein C, cardiac-type-like
KO
K12568
myosin-binding protein C, cardiac-type
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
115113705
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
THB
Ig_DSCAM-DSCAML_C
V-set
C1-set
C2-set_2
PKD_3
Ig_CYK3_C
Motif
Other DBs
NCBI-GeneID:
115113705
NCBI-ProteinID:
XP_029497501
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All DBs
Position
LG28:59908762..59950791
Genome browser
AA seq
1290 aa
AA seq
DB search
MPEPVKKTVSTFAKKPKTQVAEEGATVXFETEAGKPDAKVRRQSNTKDLASGDKYVIKAD
GNKHXSIQAVTKEDGTAYAVIAGGSKVKFDLKVKEKEVKLEVKEKEEEAQGGAGDPAASD
PAATDTVAPAEAPTPAETPAAADTTPAAPQPESQAPDTKTDLTGLFTEKPQSGEVTVGEN
IHFVAKVNAASLLKKPTIKWFKGKWMDLASKSGKNLQLKELYDRNSKVYTFEMQIIAAKP
SFAGAYRCEVSSRDKFDSCNFDLTVHEARAVEGFDIRAAFRRTSVDGSEEAGELDFSALL
KKRDSFFKGSPGHRASKSQVKNEPDEDVWEILQKAPASEYEKIAFQYGITDLRGMLKRLK
KMKKEEKKSEAFLKKLDPAYQVEKGHKMKLCIEVANEDVDVKWLKNGQEIQSTGSKYIFE
SVGNKRYLTINHCSLSDDATYTCVVGDEKCTTELFVKEPPVTITSHLEDQMVMKGERVEL
ECEVSEEGATVKWEKDGVELTRDESFKYRFKKDGRKHVLIINEATKEDCGHYTVKTNGGE
SMAELMVSEKELEVYQNIADLTVKAKDEAVFKCEVSDETVKGIWYKNGVEVKADARTHIT
HIGRIHKLTIDDVKPEDQGDYTFVPEGYAFNLSAKLNFLEVKIDYVPRQDPPKIHLDCMG
HTADSTIVVVAGNKLRLDVPITGDPAPTVVWTKGEKAGSEVAAETWSIKDGDVMTEGDGR
LHVESTKGHCIFTIEGADKQDEGLYSVIVRNPAGEDKADINVKVVDAPDPPSAPRILSVG
EDSCVVQWDPPKSDGGNPIIGYVLERKKKKSYRWMRLNFDPYTGTTYEAKRMIEGVEYEM
RVYAVNAIGMSCHSAASQPFIPVAPTSEPVGLCVDDISDTTVSLKWRTPEHLGSSELDGY
GVEYCKEGSDEWVPAFEGLTERTSVIIRDLPTGEKMQFRVRAYNTAGPSAPTSLAQAVTI
REIMQKPKIWIPRHLRQTLIKKVEETINLVIPFQGKPRPVITWSKDGEHLNPKQVSVRNS
DTDTILFIRKSERKDSGKYEVKLQIENVEDTASISIQIVDLPGSPEKLKIMDVWGFNVAL
EWKPPKDNGNCEITGYMVQKADKKTMEWYTVYELYRRTNCVVADLIMGNEYIFRIYAVNM
VGLSLEPCFSADSAYIQKTGFEYKPPTYKEHDFSEAPKFTHPLVSRSVIAGYNATLSCSV
RGIPKPKVTWYKNKMDISNEAKYRMFSKQGVLTLEIRKPCSFDGGVYMCKAVNASGEDAV
DCKLEIRPPGTFPQAQITKEERDKQMNKAD
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgccagagccggtcaaaaaaacagtctcaacatttgccaagaaaccaaagactcaggtg
gcagaggaaggggcaacagtgngttttgagacagaggcagggaagcctgatgcgaaggtg
agaaggcagagcaacacaaaggaccttgcctctggcgacaagtatgtgatcaaggcagat
ggaaacaagcacnttagcatccaagcagtcaccaaggaggacggcactgcctatgcagtg
attgccggtgggtcaaaagtcaagtttgaccttaaggtgaaagagaaagaagtcaaattg
gaagtgaaggagaaggaagaggaagcccagggtggagcaggggacccagcagcttcagat
ccagctgctacagacactgtagctccagcggaggccccaaccccagcagagacccctgca
gcagcggacactacaccagcagcacctcagccagaaagtcaagcccctgacacgaagaca
gacctcactggcctgtttacagagaaaccccagagtggggaggtcactgtgggtgagaac
attcattttgtggctaaagtgaatgctgcttcactgctgaagaagcccaccatcaagtgg
tttaaggggaagtggatggacctggctagcaagtctggaaagaacctgcagctcaaggag
ctttatgatcgtaactctaaggtctacacctttgagatgcagatcattgcagccaagccc
agtttcgctggagcttacaggtgtgaggtgtcatcccgggacaagtttgacagctgcaac
tttgacctaactgtgcatgaggcccgggctgtggaagggtttgacatcagggcagctttc
aggcgcaccagtgtggatggaagtgaggaagcaggagagttggacttcagtgccttgttg
aagaaaagagacagtttttttaaaggttcaccaggtcatcgtgcctctaagtcccaggtg
aaaaatgagcctgatgaggatgtatgggaaatcctccagaaggctccagccagtgagtat
gagaagatcgccttccagtatggcataacagacctgcgtgggatgttgaagaggctgaag
aagatgaagaaggaggaaaagaagagtgaagctttcctaaagaagctggaccctgcctac
caggtagaaaaagggcataaaatgaaactatgcattgaggtggccaatgaagacgtagat
gtaaaatggctgaagaatgggcaggagattcaatcaactggaagcaagtacatctttgag
agtgttggcaacaagcgatacctcaccatcaaccactgctcactgtcagacgatgccaca
tacacttgtgtggtcggagatgagaagtgcaccacagagctctttgtcaaagagcctcct
gtcactattacaagtcatctggaggaccagatggtcatgaagggtgagcgggtggagtta
gagtgtgaggtgtcagaagaaggggctactgtcaaatgggagaaagatggtgtggagctg
acaagggatgagtccttcaagtaccgcttcaagaaagatgggcgcaagcacgtcctcatc
attaatgaggcaactaaggaggactgtggccactacacagttaaaaccaatggtggtgaa
tctatggctgaactcatggtgtcggagaaggaactggaggtgtaccagaacattgctgac
ctcacggtgaaggcaaaggacgaggctgtgtttaagtgtgaggtctcagatgagactgtg
aagggtatctggtacaagaacggagtggaagtgaaggctgatgccaggacccatattaca
cacattggcaggatccacaaactcactatcgatgacgtcaaacccgaggaccagggtgac
tacacctttgttccagagggatacgcattcaacctctcagccaaactcaacttcctggag
gtcaagattgattatgtgcctcgccaagatcctccaaagatccacctggactgcatgggt
cacacggccgactccaccatagtggtggtggctgggaacaagctgcgactggacgtgccc
atcactggagacccagcgcctactgtggtctggacaaagggagaaaaggctggctctgag
gtggcggcagaaacatggagcatcaaggatggggatgtgatgacagagggagatggaagg
ctccacgtggagagcaccaagggacactgtatcttcactattgagggagcggataaacag
gacgagggcctctactctgtgattgtgcggaaccctgctggggaggacaaagctgacatt
aacgtcaaagttgttgatgcgccagaccctccctcggccccaaggatccttagtgttgga
gaggactcctgcgttgtccagtgggacccccctaagtcagatggtggcaacccgatcatt
ggctatgtgctggagaggaagaagaagaagagttacaggtggatgaggctgaactttgac
ccctacactggtactacctatgaggccaagaggatgatagaaggtgtggaatatgagatg
cgtgtctatgcagtgaacgccattggcatgtcatgccacagcgctgcctcacaacccttc
atcccagtggccccaaccagtgagcctgtcggcctgtgcgtggatgacatcagtgacact
accgtctcactgaagtggagaaccccagagcatctgggctcatctgagctggatggctat
ggggtcgagtactgcaaggagggctctgatgaatgggtgccagctttcgagggtctgaca
gagaggacatctgtaatcatccgggacctgccgacaggggagaagatgcagttccgtgtc
agagcctacaacacggcagggcccagtgcacctacctccctagcacaggccgtcactatc
cgcgagatcatgcagaaacccaaaatctggattcctagacatctccgccagaccctcatc
aagaaagtggaggagacaatcaaccttgtgatccctttccagggcaagcctaggcctgtg
atcacctggagtaaagatggggagcatctgaacccgaagcaggtcagcgtccggaacagc
gacaccgacacaatcctgttcatccgcaagtcagagaggaaggactctgggaagtatgaa
gtcaagctgcagattgagaatgttgaggacacagccagcatctcaattcagatagtcgat
ttgcctgggtctccagagaaactgaagatcatggatgtttggggctttaacgtggctctg
gagtggaagccacccaaggacaatggaaattgtgaaataaccggctacatggttcagaag
gctgacaagaagaccatggaatggtacactgtctatgagctatataggcgaactaactgt
gtggtggctgatctcatcatggggaatgaatacatcttccgtatctacgctgtgaacatg
gtaggcctcagcctagagccctgcttctcagcagacagtgcctacatccagaaaacaggt
ttcgaatacaagcctccaacttacaaggagcatgacttttccgaggcgcctaagttcaca
caccctctagtgagccgttcagtcatagcaggctacaacgccaccctcagctgctctgtc
agaggcatccccaagcccaaagtgacatggtacaaaaacaagatggacatctccaacgag
gccaagtaccgtatgttcagtaagcagggcgtactcaccctggagatccgcaagccctgc
tcatttgacgggggagtgtacatgtgcaaagcagtcaacgccagtggagaagacgcagtg
gattgcaagctggagattcgcccacctggcactttcccccaagctcaaatcaccaaagag
gagagggataagcagatgaacaaggctgattag
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