Oncorhynchus nerka (sockeye salmon): 115113731
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Entry
115113731 CDS
T07952
Symbol
st5
Name
(RefSeq) suppression of tumorigenicity 5 protein isoform X1
KO
K20161
DENN domain-containing protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115113731 (st5)
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
115113731 (st5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
Exog_C
Motif
Other DBs
NCBI-GeneID:
115113731
NCBI-ProteinID:
XP_029497540
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All DBs
Position
LG28:complement(60883076..60957439)
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AA seq
1159 aa
AA seq
DB search
MQDNRVYRRVGGPRVTMTANKSSKAAPRARGANVPRDIPDRCQSASPPPILSATQGRYHT
PLSDSEDNRQHVRYVKTDGRLLGRAGWSSKTASLCSGASLSCDLLSQSRLTKSKSISCLD
NKLSIYKPSGGAQVSQEAQGGQEEQKENQKQEDLPGGGGLSGGPLSWSTLSLGPSSNHSH
KRTLSLSRPVSGASSVAIRKKISEWECRRVALPRMSLCLEKRPVGERVGGSEGCPSLLSS
PCSEKTFDFKSIRRMSKAFSECSYPETEEEEAASDSEFLGRFQKRPGKTDSSALFLSSLS
TRKETSAVLNRIQKIEKVLKESPSQPPRYLSNCYAPDKTKQKCVMIGGVEDLDSRGTSKR
SSICSVVTEPDALPASDKLSRQRFSVSSTRSETESPEPPCQQTPEGMPVNPLPKPKRTFE
YDANRNHKGTSPSNGLPPGSASEESPPLLPTTPAPNMTRNLTKDWSSPKRLQDRESCELE
DAASLASSYPSSHTENGTVSTETRSSSRPSSKSTLEENAYEDIVEKENPYEDVDPKRRSL
GRKNRLVPESNRTWTTQKLNSPPQLPSKPSSQSLCLSGPTDKKSHRASRLSKRHSHDDML
LLPPQLGVSPSPCCLLDDSLSSASETLASRRHRRIPKMVQRINSIYSTKRGKKRLKKLSL
SNIETASLRDDNSESESDSDDRFKAHTQRLLKLQSMLRRAPSYRTLELQLIEWQERELFE
YFVVVSLKKKPTKNSFSPEVTYQFPKLERPTKLMREAEQRLKAIPQFCFPDAKDWTPVSE
YSSETFSFMLTGEDGSRRFGYCRRLLPSGKGPRLPEVYCVISRLGCFHLFSRILDEVERR
RGISAALVYPFMRSLMESPFPAPGKTIKVKTFLPGAGNEVIELRRPMDSRLEHVDFDSLF
SCLSVRQVVQVFASLLLERRVIFVADKLSTLSSCMHAVVALLYPFSWQHTFIPVLPASMV
DIVCCPTPFLVGLLSSSLPKLKDLPVEEALMVDLGTDRFLRQMDDEASLLPRKLQSALEL
TLEQRNDIINQDSDSESDEECNSLNSLVSEAFIRFFLETIGHYSLFLTQSERGERSFQRE
AFRKSVASKSIRRFLGVFMESQMFAGFIQDRELRKCRAKGLFEQRVEQYLEELPDTEQSG
VNKFLKGLGNKMKFLHKKN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatagagtgtataggcgtgtgggcggtccgagggtgacgatgactgccaac
aaaagttccaaggctgcaccccgagcaagaggggctaatgtgccccgggacatccccgac
aggtgccagtctgcgtccccaccccccattctttctgccacacaggggcggtaccacacc
ccgctcagcgacagcgaggacaacaggcagcacgtcagatacgtcaaaacagacggcaga
ctcttgggccgggccggctggagcagcaagaccgctagcctctgcagtggagcctccctc
tcctgtgacttactgtcccagagccgacttaccaagtccaagagcattagctgcctggac
aacaagctctccatctacaagccctctggtggggctcaggtgagtcaggaggcccagggg
ggccaagaggagcagaaagagaaccagaaacaggaggaccttcctggggggggtggactg
agtggtggtcccctgagctggagcaccctctccttgggaccttcatccaaccacagccac
aagcgcaccctctctctcagccgccccgtgtcaggggcatcctctgtggccatccgtaag
aagatctcagaatgggagtgcaggagggtggctctgcctaggatgagcctgtgtctggag
aagagacctgtaggtgagcgtgtgggtggcagcgagggctgccccagcctcctctcctca
ccttgcagtgagaagacctttgacttcaagagcatccggaggatgagtaaagctttctcc
gagtgctcctatccagagacagaggaagaggaggcagcctcagacagtgagtttctgggc
cgcttccagaagaggccaggaaagaccgactcctctgcgttattcctgagctccctgtcc
actcggaaggaaacgtctgctgtactcaatcggatacaaaagatcgagaaggtgctgaag
gagagccccagccagccaccccggtatcttagtaactgctatgcaccagacaaaacgaaa
cagaagtgtgttatgataggtggggtcgaggacttggacagtaggggcaccagtaaacgc
agcagtatatgttctgtggtcacagaaccagacgccctgccggcctctgataaactctcc
agacagaggttcagtgtgagctcaacccggtcagagaccgagagcccagagcccccctgt
caacagacaccggagggcatgccagtcaaccccctgcccaaacctaaacgcacctttgag
tacgacgccaaccgcaaccacaagggcacgtcgccaagcaatggactacctcctggcagt
gcttctgaggagtcaccacccctgctgcccaccacccccgcacccaacatgacgcgaaat
ctgacgaaggactggagctcccccaagagactccaggacagggagtcatgtgagttggag
gatgctgccagcctggcctcctcgtacccgtcctctcacacagagaatggcactgtttcc
acagagacccgcagcagcagccggcccagctccaaaagcactttagaggagaacgcctat
gaggacatagtggagaaggagaacccgtacgaggacgtggacccgaagaggaggagtttg
ggtcggaagaaccgcttggtaccggaaagcaaccggacctggaccacccagaaactcaac
tcacctcctcagctgccctctaagcccagtagccagtccctgtgcctctctggtcccaca
gacaagaagagtcaccgggcatcccgcctgtccaagcgacacagccatgatgacatgctg
ctgctgccgcctcagctgggggtctctccctccccctgctgcctgctggatgacagcctg
agcagcgccagcgaaactctggcctctcgtaggcaccggaggatccccaagatggtccag
agaatcaactccatttactctaccaagagagggaagaagaggctgaagaagctgtccttg
tctaatattgagacggcatctctgagagatgacaacagcgagagtgagagcgattctgat
gacaggttcaaagcccacacccagaggctgctgaagctgcagtcaatgctgaggagggcc
cctagctaccgcacactggagctgcagctgattgagtggcaggagagggagctgtttgag
tactttgtggtggtgtccctcaagaaaaagcccaccaagaactccttctctcccgaagtc
acctaccagttccccaagctagagaggcccaccaagctgatgagggaggcagagcagaga
ctcaaagccatcccccagttctgctttccagatgccaaggactggaccccagtgtctgaa
tacagcagtgagaccttctcgttcatgttgactggagaggatggcagcaggaggtttggg
tactgcaggcgtctgctgccgagtgggaaagggcctcgccttcctgaggtgtactgcgtc
atcagccgactgggctgtttccacctgttctctaggatcctggatgaggtggagaggcgg
agggggatctctgcagccctggtctaccccttcatgaggagtctgatggagtcacccttc
ccagcgccggggaagaccatcaaagtcaagaccttcctgcctggagcagggaatgaggtc
attgagctgaggcggcccatggactccagactggagcatgtagactttgacagtctcttt
agctgcctgagcgtgcgtcaggtggtgcaggtcttcgcctccctgctgctggagcgcaga
gtcatctttgtggctgataaactcagtaccctgtccagctgtatgcacgcggtggtggct
ctgctctatcccttctcctggcagcacaccttcatccccgtcctgcctgcctccatggtg
gacatcgtctgctgccccacgcccttcctggtggggctcctgtccagctcactgcccaaa
ctcaaagacctgcctgtggaagaggctttgatggtggacctgggaactgaccgcttcctc
agacagatggatgatgaggcctcgctgttgccacggaaactccagtctgctcttgagcta
actctggagcagaggaacgacatcatcaatcaagactctgacagcgagtcagacgaagag
tgtaactccttgaacagcctggtgtcggaggccttcatccgtttctttctggaaaccatc
ggccactactccctgttcctcacccagagcgagcgaggagaacgcagtttccagcgcgag
gccttccgcaagtctgtggcctccaagagcatccgtcgcttcctgggggtcttcatggag
tcccagatgtttgctgggttcatccaagaccgggagctgcggaaatgccgggccaaagga
ctctttgagcagagggtggagcagtacctggaagagctaccagacacagagcagagtgga
gtgaacaagttcctcaaagggctaggaaataaaatgaagtttcttcacaaaaagaactga
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