Oncorhynchus nerka (sockeye salmon): 115113773
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Entry
115113773 CDS
T07952
Name
(RefSeq) iroquois-class homeodomain protein IRX-6-like isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115113773
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
115113773
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
115113773
NCBI-ProteinID:
XP_029497615
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Position
LG28:62580250..62585449
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AA seq
424 aa
AA seq
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MKDGTGTLHSGITQPATYYPYDHSLGQYQYDRYGTMDFNGSARRKNATRETTSTLKTWLY
EHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKAGDDRKDDQ
DKSDQDCVTKDSSECKDEKDLHLSDLEDMEDMEDCDKLDSDCEKMAPRGPEEQQDLHRAM
SSGGVGPGGPPKRDCSSELSLSFPNSFHHSFPCGIKSLPSLPSLPTMPSDFLDPLVTSKP
PSTTTTIPTGTHTVSLSHFEVSDRDKPRIWSLARTAATGVILGSAHHGAPELRTGSMLGD
CHLQGTRLPVTGTRQCGPLRGLQDPTNISNAENPFQEGPLLQSKVYSAGSYNHKALQLHC
SSYPALSDSCQYSTIEGFSSGKAETEPSELSDTCVTLQDDKVTAFRPVMKRLMDTQSLHS
GTCI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatggcacaggcactctgcattctggcataactcaacctgccacctactatcct
tatgaccactcactgggccagtaccaatatgacaggtatgggactatggactttaatggg
tcagccaggaggaagaatgccacacgtgagaccaccagtaccctgaagacatggctgtac
gagcacaggaaaaacccctaccccaccaagggcgagaagatcatgctggccatcatcacc
aaaatgacgctcacccaagtttccacctggttcgccaacgccaggaggaggctaaagaag
gagaacaagatgacctggtcaccaaagaataaggctggggacgacaggaaggacgaccag
gataaaagtgaccaagattgtgtcaccaaagattccagtgagtgtaaagatgagaaagac
cttcatctgagtgacctggaggacatggaggacatggaggactgtgacaagctggacagt
gactgtgagaagatggcacccaggggccctgaggaacagcaggacctccacagggccatg
tccagtggtggtgttggccctggaggccctccaaagagagactgcagctcagagctttcc
ctctcctttcccaacagcttccaccactcattcccatgtggtatcaagagcctaccctcc
ctgccctctctacccaccatgccctcggacttccttgatccactggtgacgtccaagccc
ccctccaccaccaccaccatccccacgggcactcacactgtgtccctgtcacacttcgag
gtgtcggaccgggacaaaccgaggatctggtctctggcgcgtacagcggccacgggggtc
atcctgggctctgctcaccacggggccccagagctccggacagggagcatgctgggagac
tgccatctacaggggaccaggctaccagtgactggtaccagacagtgtgggcccctcagg
ggcctccaggatcctactaacatatccaatgctgagaaccctttccaggagggccccttg
ttgcaatctaaggtctatagtgcaggcagctacaaccacaaggccctccaactgcactgt
tcctcctatcctgctctttcagactcttgccagtactccactatcgaaggattctccagt
gggaaggcagagacagagccctcggaactcagtgacacatgtgtgaccctgcaggatgac
aaggtcactgccttcagacctgttatgaagaggttgatggacacgcagtcgttacacagt
gggacttgtatttag
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