Oncorhynchus nerka (sockeye salmon): 115113947
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Entry
115113947 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF152-like isoform X1
KO
K15705
E3 ubiquitin-protein ligase RNF152 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
115113947
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115113947
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115113947
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115113947
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF152_C
zf-RING_5
zf-C3HC4
zf-RING_10
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
115113947
NCBI-ProteinID:
XP_029497741
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All DBs
Position
LG9b:21692796..21694320
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AA seq
225 aa
AA seq
DB search
MQELLLRLLSDKDLEVNILASPYQIQMEPDMDLTKYNTTVKRRGGETKSMKYLPKLLDCQ
HTCCSVCLTQMKMSLSELRCPWCRSVTTLPPGVSISQLPDDPDIMAVISVPSPPEYTPVF
FKQLLSNTCYLSIDHQERATVSGEHSGRHLQAGQTQEMSPVPVSDEGSPGLGEEHGEREE
GCCKSSFTTRAGLVVLLGFVLLLLVYIVLYNMKCIYKRFTMISCA
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaacttctccttaggctgctgagcgataaagatctagaggtcaacatccttgcc
agtccataccagatacagatggagccagacatggatttaactaagtacaacacaactgta
aagaggaggggaggcgagaccaagagcatgaaatatctgcccaagctcttggactgccaa
cacacctgctgctctgtgtgcttgacccagatgaagatgagcctgagtgagctgcgctgc
ccctggtgtcgctctgtcaccaccctgccacctggggtctccatctcccagctcccagat
gaccccgacattatggccgtcatctctgtcccatcccccccagaatacacacctgtcttc
ttcaaacagctgcttagtaacacctgctacctgtctatagaccaccaagagagggccaca
gtgtctggtgaacattcaggtaggcacctgcaggctgggcagacacaggagatgtctcca
gtgcctgtgtctgacgagggaagcccagggttgggggaggaacatggggagagggaggaa
ggttgttgtaagagctcgttcacgaccagggcaggcttagtggttcttctgggttttgtt
ctactcttacttgtgtacattgtactgtacaacatgaaatgcatttacaaacggttcacc
atgatatcctgtgcctaa
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