Oncorhynchus nerka (sockeye salmon): 115113949
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Entry
115113949 CDS
T07952
Name
(RefSeq) glutamate decarboxylase 1-like
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00250
Alanine, aspartate and glutamate metabolism
one00410
beta-Alanine metabolism
one00430
Taurine and hypotaurine metabolism
one00650
Butanoate metabolism
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
115113949
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
115113949
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
115113949
00430 Taurine and hypotaurine metabolism
115113949
Enzymes [BR:
one01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
115113949
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
SepSecS
Motif
Other DBs
NCBI-GeneID:
115113949
NCBI-ProteinID:
XP_029497743
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Position
LG9b:complement(21695885..21713541)
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AA seq
580 aa
AA seq
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MEGQQWNSEILDKLHSQNSIICGHIMDYLQLPESMTEKSTPGGQILAESKQRSSSDNINS
PQTSDNTCIPKDFSCIYNKDLLPALSGEDTTKSFFQELVNILLSYVCKSFRRSSKVLDFH
HPHQLREGLEGFGLELPDQPENLEQLLVDCRDTLKYGVKTGHPRFFNQLSSGLDVIGLAG
EWLTSTANTNMFTYEVSPVFILMEEILLKKMQEIVGWSEEEGDGVFSLGGTMSNLYSVLL
ARYHFFPEVKTKGMTALPRLILFTSAHSHYSIKKSAAVLGIGSENVVVVKCNDRGKIIPA
ELESSILTAKDEGCVPFYVNATAGTTVYGAFDPLNAIADICESHGLWLHVDAAWGGGLLM
SKRHRVKLQGIERAWSVTWNPHKMMGAPLQCSAILVKKRGLLKDCNQMCAEYLFQTDKHY
DTSYDTGDKTIQCGRHVDVFKLWLMWKAKGSEGFESQVNKCLENAEHLFDKLKQRPDFEL
VFKSEPEHSNVCFWYIPPSLRNMSPGPERNRRLHEVAPKIKAKMMEQGMAMIGYQPLGDK
VNFFRCVFSNPATQTEDVDYLLEEIASLGHDICIRTETDL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaggggcagcagtggaacagtgagatactggacaaacttcactctcagaactcaatc
atatgtggacacattatggattacttgcagctaccagaaagcatgacagaaaaatctaca
cctggtgggcagattttggcagagagtaaacagagaagctcctctgacaatatcaactct
ccacagacaagtgacaacacctgcatacccaaggacttcagctgcatatacaacaaagat
ctactccctgctctcagtggtgaggacacaaccaaaagtttcttccaagagctggtgaac
attctcctcagctatgtctgcaagtcgttcagacggagctccaaagtcctggacttccac
caccctcaccaactcagagagggcctggagggcttcggtctggagctcccagaccagcct
gagaacctggaacaactcctggtcgactgcagggacaccttgaagtatggagtcaaaaca
ggtcacccacgcttcttcaatcagctgtcatcagggctggatgtcatcggtctggccggg
gaatggctgacgtctaccgccaacacaaacatgtttacttatgaagtgtccccagtgttc
attctgatggaggagattctactgaagaagatgcaggagattgtgggttggtcagaggaa
gagggggatggagtgttttccttaggtgggaccatgtccaatctgtacagtgtactactg
gccagataccacttcttccctgaagtgaagaccaaagggatgactgctctgcccaggcta
atcctcttcacatcagcacatagtcattattcaatcaagaaatctgcagcagtccttggg
ataggaagtgaaaatgttgtggtggtgaaatgtaatgaccgggggaaaattatccctgca
gaattggagtcaagtatccttactgccaaagatgagggttgtgtcccattctacgtcaat
gccacagcaggcaccactgtgtacggagcctttgatcctctcaatgccatcgcagacatc
tgtgagagccatggactctggctgcatgttgatgcagcctggggcggaggactgttgatg
tccaagcggcaccgtgtgaaactacaagggattgaacgagcctggtctgtgacttggaac
cctcataaaatgatgggtgctccgctgcaatgctcagccatactggtgaagaaaaggggc
ctcttgaaagactgcaatcagatgtgtgctgaataccttttccaaactgacaagcactac
gacacctcttatgacactggagacaagaccattcagtgtggcaggcatgttgatgtcttc
aagctctggctcatgtggaaggccaagggttcagaaggctttgaatcacaggtcaataaa
tgtttggaaaatgctgagcacttgtttgacaaactcaaacaaagaccagactttgaactt
gtcttcaaaagcgaacctgaacacagcaacgtgtgcttctggtacatcccaccaagtctg
aggaacatgtcaccaggtcctgagaggaacaggagactccatgaggtggcaccaaagatc
aaagccaagatgatggagcaggggatggccatgattggctatcagccgctcggagacaaa
gttaacttcttccgatgtgtcttctccaacccggccacacagacagaggatgtggactac
ctcttggaggagatcgcttctcttggtcatgacatctgcatcaggactgaaaccgatttg
tga
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