Oncorhynchus nerka (sockeye salmon): 115113951
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Entry
115113951 CDS
T07952
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115113951
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115113951
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
Motif
Other DBs
NCBI-GeneID:
115113951
NCBI-ProteinID:
XP_029497746
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Position
LG9b:21991007..22024354
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AA seq
806 aa
AA seq
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MITRNGLLLVFWFLLDKGFLAPLHAPPQSRMGREQHLRGVEGLGLRKHVASGVQRVKRGW
VWNQFFVLEEYMGSEPQYVGKLHTDLDRGDSDVKYTLSGEGVGTIFTIDQTTGDIHALMG
LDREVKSYYTLRAQAVDMNTGRPLEPESEFIIKIQDVNDNEPKFLDGPYTASVPEMSPGG
TFVMQVTATDADDPSYGNSARIVYSILHGQPYFSVDSKTGVIRTALPNMDREVKELYQVL
IQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKSIFHLRVPESSLVGSAVGKIRAHDL
DSEKNAEVEYSIVPGDEGHMFNITSNGHSQEGIIVLSEHLDYETKRSYTFKVEASNAHLD
SRFLHRGPFKDTATVKVNVLDVDEPPVFTKTSYTIDVYEDTPVSTIIGSVTAQDLDASTS
AVRYSIEWKRPVDGCFDIDTVEGTISTTEMLDRESNRQHNIFVVATKVNNPLLSNKVTVT
VNVLDVNEFPPELTILFDTFVCENAKVGQVIQTINATDKDLPTVGQKFFFKSPREIRNRN
FTVRDFGNNTAGIVTKRVGFQRRVQEYYVVPVVVEDSGYPAQSSTGTLTVRVCACETDGS
LLSCTAEAVFLPVGLSTGAVMAILLCMVILLVIVVLYVGLRRQKKRETLMSSKEDIRDNV
VHYDVEGGGEEDTHAFDMGTLRNTKAIKENMLRRGTGSWSDVTTQTEINGSTPTTEGSTN
IIRDYIHQRLQENHLSFSAPPYDSLATYAYEGDGSVAESLSSIESWTVDGREDFRYLSEW
GPSFKTLVGILDKDKAAPPTAEVEES
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgattacaaggaacggtctgctgttggtcttttggtttctcttggacaaaggtttcctg
gctcccctccacgctccgccccaaagcaggatgggaagagagcaacacctgaggggtgtg
gaaggactgggactgaggaaacatgtggcgtcaggggttcagagggtgaagagaggatgg
gtgtggaaccagttctttgtactggaggaatatatgggatcggaaccacaatatgttgga
aagcttcacactgatctggacaggggcgacagtgacgtgaagtacactctatcaggagaa
ggagtcggaaccatcttcaccatagaccagacgacaggtgacatccatgccttgatgggt
ttggaccgagaggtgaaatcttactacacgttacgagcccaggctgtggacatgaacaca
ggcaggcctctggagcctgagtctgaattcatcataaaaattcaagacgtcaatgacaat
gaacccaagttcttggacggcccatacacagccagtgtcccagagatgtcaccagggggt
acttttgtaatgcaggtgactgccacagatgctgatgacccctcctatgggaatagtgca
cggatcgtctacagtatcctacatggacagccttacttttcagtcgactccaaaactggg
gttattagaactgcgttgcctaacatggaccgtgaagtgaaggagctttaccaggtcctt
attcaggcaaaggatatgggcggtcagctgggaggactagccggaaccaccaccatcaac
atcaccctcagcgacgtcaacgacaacccacccaggttttcaaaaagtatattccacctc
agggtcccagagtcttcgttagtgggctcagcagtggggaagatcagagctcatgacctg
gactctgagaagaatgcagaggtggaatattctatcgttcctggagatgaaggacacatg
tttaacatcacctccaacgggcacagtcaagagggaatcatagtcctcagtgagcatctc
gactacgaaaccaaaagatcatacacctttaaagtggaggcctccaacgctcacctggat
tcccggttcctgcaccggggccccttcaaagacactgccaccgtgaaggtcaacgtgctg
gatgtggatgaaccccctgtgttcactaagacctcttacaccatagatgtgtatgaggac
acccctgtgagcaccatcattggatctgttacagcgcaggacctagatgcaagtaccagt
gcagttagatactctattgagtggaagaggcctgtggacggctgctttgacattgatact
gtggaagggaccatctccaccaccgagatgttggacagagagagtaataggcagcacaat
atctttgttgtggccactaaagttaacaaccctctcctatccaacaaggtcacagtcaca
gtcaatgtgctggatgtcaacgagttccctccggagctcaccattctctttgacacgttt
gtctgtgaaaatgcaaaagtaggccaggtaattcagaccatcaatgctacggacaaggat
cttcccactgttggacagaagttcttcttcaagtcccccagggaaatcagaaacaggaat
ttcactgtgcgagactttggaaacaacacagcagggatagtgaccaagcgtgtggggttc
cagaggcgggtccaggagtactacgtggtgcctgtggtggtggaggacagtggctaccca
gcccagagcagcaccggcaccctcactgtccgcgtgtgtgcctgtgagaccgacggttcc
ctcctgtcctgcacggcagaagcagtctttctaccagtgggtctcagcaccggggcagtg
atggccattttactgtgcatggtcatactcctggtgatcgtggtgctctacgtaggcctg
agacggcagaagaagagggagacattgatgtcgtccaaggaggacatccgggacaacgtg
gtccactatgacgtcgaggggggaggcgaggaggacacccacgccttcgacatgggcacg
ctgaggaacaccaaggccataaaggagaacatgctccgccggggcacagggtcatggtca
gatgtcaccactcaaactgagatcaatgggtcaacccctaccacagaaggcagcactaac
atcatcagggactatattcaccagcgtctccaggagaaccacctgagtttctctgctccc
ccgtatgactcgctggctacatacgcctacgagggggatgggtcagtggcagagtcgctg
agctccatcgagtcatggacggtggacggccgtgaggacttcagatacctcagcgagtgg
gggccgtccttcaaaactctggtggggatattagacaaagacaaagcagctcctcccact
gcggaagtggaggagagttga
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