Oncorhynchus nerka (sockeye salmon): 115113966
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Entry
115113966 CDS
T07952
Name
(RefSeq) opsin-5-like
KO
K08385
G0-opsin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
one04030
]
115113966
G protein-coupled receptors [BR:
one04030
]
Rhodopsin family
Vision
Opsin
115113966
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
Motif
Other DBs
NCBI-GeneID:
115113966
NCBI-ProteinID:
XP_029497760
EnsemblRapid:
ENSONEG00000014651
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Position
LG9b:26565954..26577311
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AA seq
471 aa
AA seq
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MGMLASIDDIAFHSNIPVAADITVAIVYAVFGICSLFSNSTLLYISYKKKHLLKPAEFFI
INLAISDMSLTLSLYPMAITSSIYHRWLFGKTVCLIYAFCGMLFGVCSLTTLTLLSMVCF
VKVCYPLYGNRFNAVHGRLLIACAWAWALVFACSPLAHWGEYGPEPYGTACCIDWRLSNL
HPVARSYTAVLFVLCYIVPCCAIVASYTGILMTVRASHKAMEHHEARQTKMSNIQDVIVK
LSVAVCIGFFAAWSPYAVVSMWAAFGHMDNIPPLAFAVPAMFAKSSTIYNPIIYLLLRPN
FRRVMYRDLVSLCRAFLKGCLCSCSPGAVGKCHSHLVVRVSLQSFCRRPGHGQSCSPTSS
ARQAPGGSRGCTSACEKCSDAFECFRHYPRGCHGGTNIPSSSAKVYAPQDPLSTEPQLQS
MTQKQMRKQKKQEACHKKSLRATKHSKRTSEIDNLRINFEMVPGHAKVAWP
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggcatgttagcgagcattgatgacattgcattccattcaaacatacctgtggcagca
gatataacagtagccatagtgtatgcagtgtttggcatatgctctctgtttagcaacagc
acactgctatacatctcctacaagaagaagcacctgcttaaacctgctgagttcttcata
atcaacctggccatcagcgacatgagtctaaccctgtccctctaccccatggccatcaca
tccagcatctaccataggtggctgtttgggaaaacagtgtgtttgatctacgcgttctgc
ggcatgttgtttggagtctgcagtctgacaactctcaccctgttgagcatggtgtgtttt
gtgaaagtatgttatcctctctacggtaaccggttcaacgccgtccacggccgtctactg
atagcctgtgcatgggcttgggccctggtgttcgcctgctcccctctggcccactggggt
gagtatggtccggagccctacggcacagcctgctgcatcgactggcgcctgtccaacctg
catcccgtggcccgctcctacacggcggtgctctttgtcttgtgctacatcgtgccctgc
tgtgccattgtggcgtcctacacgggcatcctgatgacggtccgagcctcccataaggcc
atggagcatcacgaggcccggcagaccaagatgagcaacatccaggatgttattgtgaag
ctgagtgtcgctgtctgtatcggtttcttcgcagcgtggagcccttatgccgtggtgtcg
atgtgggcagcgttcggacacatggataacatcccacctttggcattcgccgtgcctgcc
atgtttgctaagtcctccaccatctacaaccccattatctacctgctgctcaggcctaac
ttccgcagggtgatgtaccgagacctagtgagcctttgcagggcctttctgaagggctgc
ctgtgctcctgctccccgggcgctgtggggaagtgccactcccacttggtggtccgggtc
agcctccaatcattctgtagacgtccgggccacggccagtcctgttcccccacctcgtcc
gcccgccaagccccgggcgggtccagaggttgcactagcgcctgcgagaagtgcagcgat
gccttcgagtgcttcagacactacccaagaggttgccatggcggtaccaacatccccagc
tcctcagccaaagtttatgcacctcaggatccgctctcaacagagccccagctgcagtcg
atgacgcaaaaacagatgcggaagcagaaaaagcaggaagcgtgtcataagaagtccctg
cgagccaccaagcacagcaaaaggacctcagaaatcgacaaccttcggattaactttgag
atggtgccgggacacgctaaagtggcctggccctaa
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