Oncorhynchus nerka (sockeye salmon): 115114026
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Entry
115114026 CDS
T07952
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115114026
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
115114026
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Motif
Pfam:
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
115114026
NCBI-ProteinID:
XP_029497814
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Position
LG9b:complement(34467711..34538610)
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AA seq
644 aa
AA seq
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MTEEANDRVTEEANDRVTEEGNDRVTEEGNNSDGGGEQQSQSGFSTTAATLETAGWGVSK
HKNDTWSELYSFAVFKAMSHMLCIGYGRQAPESLSDIWLTMLSMIVGATCYAVFIGHATA
LIQSLDSSRRQYQEKYKQVEQYMSFHKLPSDFRQKIHDYYEHRYQGKMFDEDSILEELNE
PLREEIVNFNCRKLVASMPLFANAEPNFVTAMLIMLRFEVFQPRDYIIREGTIGKKMYFI
QHGVCNVITKGTLGMKLSDGSYFGEICLLTRGRRTASVRAETYCRLYSLSVDNFNEVLEE
YPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNHENEMIQEIVKYDREMVKL
VDLQRPRTMSMTSSVPGGMFSPAGPSGVGALASLQQAVAMSFCPQGMGGMAGSGTLQSPR
MLRRFQVVHSLSQSPVSASPLQSQPPQMAHATGVFGSAISSPPVQSPLAHPGRTFQYMGG
AGPSGSQLSLVQHHVPSPTHTIQRPSSQKSTHSLHSGTLSQDARVLSASQLSLPQDGTPP
AGPSPPQSTHPSTHASSTSIGPPQPTHPSQPGPSGVGVQVGGRPAGVPQRVAFASTPPPG
GAPGMGAAAAAAGSGLPAPGAPKKDSIVSIPELDSARNRLSSNL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggaggcgaacgacagagtgacggaggaggcgaacgacagagtgacggaggag
gggaacgacagagtgacggaggaggggaacaacagtgacggaggaggggaacaacagtcc
cagtcaggtttcagcactacagcagccacactggagacagcggggtggggtgtgtccaaa
cacaagaatgacacatggtctgagctgtattcatttgcagtgttcaaggcaatgagccac
atgttgtgtatcggctacggtcggcaggccccggagagcctgtctgatatctggctcacc
atgctcagcatgatcgtaggggccacctgctacgctgtgttcataggccatgccaccgca
ctcatccagtccctggactcgtcccgacgacagtaccaggagaagtacaaacaagtggag
cagtacatgtccttccacaagctgccatccgacttccgacagaaaatccatgactattat
gagcaccggtaccaggggaagatgtttgatgaagacagcatcctagaggaactgaacgaa
ccactcagagaggaaattgtcaatttcaactgccgtaagctggtggcgtccatgccgctg
ttcgccaacgcagagcccaactttgtgacagccatgctgatcatgctccgctttgaggtc
ttccagcctcgtgattacatcatcagagagggcaccattggcaagaagatgtactttatc
cagcacggagtctgtaacgttatcaccaagggaaccctgggaatgaagctctctgatggc
tcctactttggagagatctgtttgctgacgcggggtcggcgtacggccagcgtcagagcg
gagacatactgtcgtctctactccctgtctgtggacaactttaatgaggtgctagaggag
tatcccatgatgagacgggcctttgagaccgtggccattgaccgactggaccgcataggc
aagaagaactccattctgatgcacaaagtgcagcatgatctcaactccggcgttttcaac
aaccatgagaatgagatgatccaggagattgttaagtacgaccgtgagatggtcaaacta
gtggaccttcagagaccccgcaccatgtccatgacatcctccgtccctgggggcatgttc
tcccccgcaggcccatctggggtcggggccctcgccagcctccagcaggctgtggccatg
agcttctgcccccaggggatggggggaatggcagggtcagggacgctgcagtccccccgt
atgttgcggaggttccaggtggtccatagcctgtcacagagccctgtttccgcatctcct
ctccagtcccagccaccacagatggctcatgcaacaggagtgtttgggtcggctatttcc
agcccaccagtccagagccctctggcgcatccaggacggacattccagtacatgggggga
gcggggccgtctgggtctcagctgtccctggtgcagcaccacgttcccagccccacgcac
accatccagaggccctcctcacagaaaagcacccactcgctccactcaggcacccttagc
caagatgcccgtgtcctctccgcctcccagctctccctccctcaggatggaacccctcct
gccggccccagccctccccaatctacccacccatccacccatgcctcctccacctccatt
ggcccccctcagcccactcaccccagccagcctgggccctctggggtgggggtccaggtt
ggggggagacccgcgggagttccacagcgggtggccttcgcctccactcctcccccagga
ggagcacccgggatgggggcggctgcagcggcggctgggtcggggctcccggcccctgga
gctcctaagaaggattcgatcgttagcataccggagttagactcagcccggaaccggctg
tcttccaacttgtga
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