Oncorhynchus nerka (sockeye salmon): 115114030
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Entry
115114030 CDS
T07952
Name
(RefSeq) zinc finger E-box-binding homeobox 1-like
KO
K09299
zinc finger homeobox protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115114030
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
115114030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
Homeodomain
zf-C2H2_15
zf-C2H2_jaz
zf-Di19
zf-met
Motif
Other DBs
NCBI-GeneID:
115114030
NCBI-ProteinID:
XP_029497817
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All DBs
Position
LG9b:complement(34825166..34848199)
Genome browser
AA seq
1092 aa
AA seq
DB search
MGPGQEAALGPDVKKQEVKVKVKEECGSEEEDEEEEEEEEEEEGVKEMIQQGDTAVIYPK
APVDKQKSASERGVSEKTGTPDTLSQLLTCPYCSRGYKRCTALKDHIKLRHEKSEDNFSC
SQCSYTFTYRTQLDCHMTQHKNQHKDPVQRHVPQTTTTTITTGGNRKFKCTECSKAFKYK
HHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCVGMVPVNGNPSPVIKVSNQT
PSQTQPSGPAAAPVRVLLRGEKTDSKPLQEQLPHTQIKSEPVDYEFKPVVVAPNGAAGTN
GTVFNGGVALPQGTALPQGMVQAVVLPTMGLMSPITINLSDLQNMLKVALDGNVLRQVLG
TANGLVTSKQGFVTQAGQQVISAISLPGFVDQDGTTKIIINYSLEPSPAQQPTTPQLLKQ
EAPPPNTASATNPQPASKVTEKLPQDLHINKTEPDDSEHESEMETQETETEAETPKALTG
KTRCLLCDNCPGDLDALHMLQHCKPTNGEGGDSATLDPSIATLLAEAGITPGQHPLKNLL
SLLKAYFALNAEPTEEELAKISDNVSLPVDVVKKWFEKMRSGQITVGPPGSSPDDSGLSD
SSTETQLDQEKSGTEIEEQQASAQTQETSSSQPPASTSPSVSASALSPLNLSSSGLVIVK
TEVDSEREAQDLPLDLSLPKQPQSQPQVPHVPQEQPLNLTCLKETVQAQLPGLQGTTNTI
YVTSSPQTTIPSPVNIMTTRLVAITNQGSGVPCLRAISTGTTKRTILIPQLTYTYTTTAC
SGTTGADGAQKTVRINGCQEEKSATSSEGVSTVEEQDNSDSSPPLKKMRRLQSGMYSCDL
CDKIFQKSSSLLRHKYEHTGKRPHECGICDKAFKHKHHLIEHTRLHSGEKPYRCDKCGKC
FSHSGSYSQHMNHRYSYCKKEPQGGRQVGRQLGMSPERSPQTEEQQSDSRPTSPPSQMDS
DERESEEELEEEEGMAAMSMDDIRVVQVGEDDEESEIYQVEEFGEERQEEEEGSREEEEE
EEEIREEEEEGSRGEEVEKEGSREEEEEVQQKQVCEEDQEEEGMREEEAHQEEVEEEEGS
REEEAHQEEVEE
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgggccctggacaggaggctgctttggggcctgatgttaagaaacaggaagttaaggtc
aaagtgaaggaggaatgtggctcagaagaggaggatgaggaggaggaggaggaggaggag
gaagaggagggggttaaggagatgatccagcagggagacacagcggtcatctaccccaag
gcgccggtcgacaaacagaagagcgcgtctgagagaggggtctcagagaagaccggcacg
ccagacaccctctcccagctcctgacttgtccctactgctcacggggctacaagcgctgc
acggccctgaaggaccacatcaagctacgtcacgagaagagcgaggacaacttcagctgc
tcccagtgcagctacaccttcacctaccggacacaactggactgtcatatgacccaacac
aagaaccaacacaaggatcctgtacagcgtcatgtaccccagaccaccaccacaacaata
acaacaggggggaacaggaagttcaagtgtactgagtgttccaaggcttttaaatataag
caccacctgaaggagcatcttcgcatccacagcggagagaagccatacgagtgccccaac
tgtaagaagaggttttcacactcagggtcctacagttcccacatcagcagtaagaagtgt
gttggcatggtgcctgtcaacggcaaccccagcccagtcattaaggtctccaaccagacc
cccagccagacccagccctctggccccgccgcagccccagtccgagtgctcctccggggg
gagaagacagacagcaagcccctgcaggagcagctcccccacactcagattaaatctgag
cctgtggattacgagttcaagccggtggtggtggcgcctaacggggcggcggggacgaat
ggaacggtgtttaatggtggcgtggcgctgcctcagggcacggcgctgcctcagggcatg
gtccaggcggtggtactgcccaccatgggtctgatgtctcctatcactattaacctcagc
gacctgcagaacatgctcaaggtggccttggatggaaacgtgctgcgtcaggtgttgggg
acggccaacgggctggtgacctccaagcaggggtttgtgacacaggctggccagcaggta
atctcagccatcagcctgcctggcttcgtggaccaggacggtaccaccaagatcatcatt
aactacagcctggagccaagcccagcccagcagcccaccacccctcagctcctcaagcag
gaggctccccctcccaacaccgccagtgccacaaacccacagcccgcctccaaagtaaca
gagaaactcccccaggacctccacatcaacaagaccgagccggacgactcggagcacgag
tcagagatggagacgcaggagacagagactgaagctgagacaccaaaggccctgacaggc
aagacaaggtgtctactgtgtgacaactgtcctggtgatttggatgcactgcacatgctc
cagcattgtaaacctaccaacggggagggaggtgacagcgccaccctcgacccctccatc
gccaccctcctggccgaggcagggataactccaggccagcatcctctaaagaatctgctc
tcactcctcaaggcctacttcgccttaaacgcagagcccaccgaggaagagctggccaag
atctctgacaatgtcagcctgcccgtggacgtggtcaagaagtggtttgagaaaatgcgg
tcaggtcagatcacggtcggaccccctggttcctctccagatgactctggactttcagat
tccagcacagagacccagctagaccaagagaagagcgggacagagatagaggagcagcag
gcctcagcccaaacacaggagacatcatcttcccaacctcctgcctcgacgtccccctct
gtctcagcctcggccctctcaccactaaacctctcctccagcggcctggtcatcgtgaag
actgaggtcgactctgagcgcgaggctcaagatcttcccctggacctgtcccttcccaag
cagccccagtcacagccccaggtcccccatgttccacaggagcagcccctcaacctcacc
tgcctgaaggagacagtccaggcccagctcccaggactccagggaaccaccaacaccatc
tacgtcacctcctccccccaaacgaccatccccagcccggtgaacataatgaccacccgg
ctagtagccatcaccaaccagggcagcggtgtgccctgcctcagagccatctccaccggc
accaccaaacggaccatcctcatcccccagctcacctacacatacaccactacagcatgc
agcggcaccactggggccgacggagcccagaagaccgtcagaatcaacggctgccaggag
gagaagtctgccaccagctcagagggtgtgtcgacggtagaggagcaggataactcagac
tcttcccctccgctgaagaagatgcgtcgactgcagagcgggatgtactcctgtgatctg
tgcgacaagatcttccagaagagcagctccctgctcaggcataaatacgaacacacagga
aagcggccacatgagtgcggcatctgcgacaaagccttcaaacacaagcaccacttgata
gaacacacgcgactgcactccggagagaagccctaccgctgtgacaagtgtggcaagtgt
ttctcccactctggctcctacagccagcacatgaaccaccgatactcctactgcaagaag
gagccccagggagggcggcaggtgggacgtcagctcgggatgagccccgaaaggagtcct
caaacagaagagcagcagtcggacagccgacccacctccccaccttcccaaatggactca
gatgagagggaaagtgaggaggagctggaggaagaggagggcatggcggccatgagcatg
gacgacatacgggtggtgcaagtgggtgaggatgacgaggagagtgagatctaccaggtg
gaggagtttggggaggagaggcaagaggaggaggaagggagcagagaggaagaggaggag
gaggaagagatcagagaggaagaggaggaagggagccgaggggaagaggtggagaaggaa
gggagcagagaggaagaggaggaggtacagcagaagcaggtgtgtgaagaagatcaggaa
gaagaagggatgagagaggaggaggcacaccaggaggaggtggaggaagaggaagggagt
agagaggaggaggcacaccaggaggaggtggaggaa
DBGET
integrated database retrieval system
