Oncorhynchus nerka (sockeye salmon): 115114037
Help
Entry
115114037 CDS
T07952
Name
(RefSeq) guanine nucleotide exchange factor VAV3-like
KO
K05730
guanine nucleotide exchange factor VAV
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115114037
09142 Cell motility
04810 Regulation of actin cytoskeleton
115114037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
CH
C1_1
CDC24
C1_2
Cor1
PH
SRA1
SH3_2
DUF2935
Motif
Other DBs
NCBI-GeneID:
115114037
NCBI-ProteinID:
XP_029497823
LinkDB
All DBs
Position
LG9b:complement(36008628..36083206)
Genome browser
AA seq
592 aa
AA seq
DB search
MKYWRQCALWLINCKVLPPNHRVTGDSAQVFDLAQTLRDGVLLCQLLNNLKPHTINLKEI
NLRPQMSQFLCLKNIRTFLTSCCEVFGMKKTDLFEAFDLFDVRDFGKVMDTLSMLSYSTV
AQQAGIKPFPSEESLKDEDIYSHLKDLIDENVLEDEEELYAPVYGLDDTDEGGEIYEDLM
RTEQHPTLKQAENVRSCCLSEIKQTEERYTETLESIEKYFLNPLKKFFTASEIDKVFVNI
PDLVKVHKSLMVEVQESILNKNALNLYQVFIAYKDRLLIYGIYCSHVEISITVLDFICKE
KEDVRLKLEECSKRANNGKFTLRDLLVVPMQRVLKYHLLLQELVKHTPDAADKNNLKMAL
DAMKDLAQYVNEVKRDKETLKEINQYQRSIENLLPAPTTLTNNPVQDRESKKWFYGFYLT
HQQGQSGFEFFFKTKELKKKWLDQFDMAISNIRPENSSNNFHQFRMHTFIRITTCSSCQL
LLRGIFNQGYLCLKCGLGAHKECLGRVGVCGRTESAKLRPERAPTVRKQPDPGLPRMLVI
RDYCGIPSPQNAPPLTIHAGDIIELICADLHSSWWQVGDDSICESREVDLAN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaagtactggcggcagtgcgcattgtggctgataaactgcaaggtgcttcctccgaac
catcgggtaaccggggacagtgcccaggtatttgacttggctcagacgctccgggacggg
gtgttgctctgtcagctgctcaacaacttgaaaccacacaccatcaacctgaaggagatt
aaccttagaccacagatgtctcagttcctctgcttgaagaatatccggaccttcctgaca
tcctgctgtgaggtgtttgggatgaagaagactgatctgttcgaggccttcgatctgttt
gatgtccgggactttggaaaggtgatggatactctgtccatgctgtcctactccacggtc
gcacaacaggcaggaatcaagccctttccatcagaggagagtctgaaagacgaggatatt
tacagtcatctgaaggacctgattgatgagaacgttctagaggatgaggaagagttgtat
gctccagtctacgggttggatgacaccgatgaaggaggagagatctatgaagacctgatg
aggaccgaacagcaccctacactgaagcaggctgagaatgtgagaagctgctgcctctca
gagatcaaacaaacagaggagagatacacagagaccctggagtctatagagaagtacttt
ttgaacccactgaagaaatttttcactgcgtcagaaatcgacaaggttttcgtcaacatc
cctgacctggtgaaagtccataagagtctgatggtggaggtgcaagagtccattctcaac
aagaacgccttaaacctctaccaggtcttcattgcctataaggacaggctactcatttat
ggaatctactgcagtcacgttgagatatccatcacagtgttggactttatttgtaaggag
aaagaggacgtacgactaaagctagaggaatgttctaaaagagccaacaatgggaagttc
actctgagagatctactggtggttcccatgcagagagtcctcaagtaccatctcctacta
caggagctggtcaaacacacccccgacgcagccgacaagaacaacctgaagatggctctg
gacgccatgaaggacttggctcagtatgtcaacgaggtgaagagagacaaggagactctg
aaggagatcaaccagtatcaacgctccatcgagaacctgttacctgcaccaacaaccctg
accaacaaccccgtccaggatagagagagcaagaagtggttctatggtttctacctgacc
catcagcaggggcagagcggctttgagttcttcttcaagaccaaggagctgaagaagaag
tggctggaccagtttgacatggcaatatccaacatcagaccagagaactccagtaacaac
ttccaccagttcaggatgcataccttcatcagaatcactacctgtagctcctgtcaactg
ctcctcaggggtatcttcaaccagggctatctctgtcttaagtgtggactcggagctcat
aaggaatgtctgggtagagtgggtgtctgtggaagaactgagtctgccaagctgaggcct
gagagggctccgacggtgcggaaacaaccagacccaggtctccctaggatgctggtgatc
agagactactgtggcatcccctctccccagaatgcccccccgttgaccatccatgctggg
gacatcatcgagctcatctgtgccgacctacacagctcctggtggcaggtgggtgacgac
tcaatctgtgagagcagagaagttgatctagccaattag
DBGET
integrated database retrieval system
