Oncorhynchus nerka (sockeye salmon): 115114045
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Entry
115114045 CDS
T07952
Symbol
lrrc6
Name
(RefSeq) protein tilB homolog isoform X1
KO
K19753
dynein axonemal assembly factor 11
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115114045 (lrrc6)
04812 Cytoskeleton proteins [BR:
one04812
]
115114045 (lrrc6)
Cilium and associated proteins [BR:
one03037
]
Motile cilia and associated proteins
Dynein assembly factors
115114045 (lrrc6)
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
115114045 (lrrc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CS_DNAAF11_C
LRR_4
LRR_9
LRR_8
LRR_NXF1-5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
115114045
NCBI-ProteinID:
XP_029497830
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All DBs
Position
LG9b:522325..582601
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AA seq
463 aa
AA seq
DB search
MVLITEDMVRRRAEHNNCEILSLEEVSLHQQDIEKIEHIDKWCRDLKILYLQNNLIPRIE
NVYRLKKLEYLNLALNNVELIENLEGCESLQKLDLTVNFVGRLSSVESLKNNLHLRELFL
VGNPCTEFEGYRQYVVASLPQLKYLDGKEIGRSERIRARQGLDEVRRRIRQQEQDYLQKR
ASEKEEAQREGGEVQRGPKRESHSSVKAKNPGFDGRWYTDINNTIPVHEENKEIQGREEK
EKTSCLSSEDQEREFWEKPCAYTPESRLEAHRHLDEKKKAKERKAVKTPKAPRTLITPHG
RVMNVNEPKLDFNLTEDGDNNTIVLDLEVYRHMDTSLMDVDVQPTYARVTVKGKIFQLVL
PAEVMPDSSTAKRSQITGHLVLTMPKAQGEIKMATPHPPKVSQSSNTPEEKTRKGNNLQR
LEVDPSKHSGVDLANIVPRENRTGEQTIFYDNFVDDPDVPPLM
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgatcacagaagacatggtacgacgtcgggcagagcataacaactgcgagatc
ctttccttagaggaggtgtctttgcatcaacaagatattgagaaaatagaacacattgat
aagtggtgcagggacctcaaaattctatatcttcaaaacaatctcattcccagaatagaa
aatgtatatagattgaaaaagttggagtatctaaaccttgcgttgaacaacgttgaactg
atcgaaaacctggaaggatgtgagagtctccagaagctggacctgacagtgaattttgtg
ggccggttgagcagtgtggagtcattgaagaacaacctccatctccgagagcttttcctg
gtggggaacccctgcactgagtttgagggctacaggcaatacgttgtggcttcactgccc
caactgaagtatctggatgggaaagagattgggaggtcggaaaggatccgagccagacaa
ggcctagatgaggtaaggaggcggattcggcagcaggagcaggattacctgcagaagaga
gcgagtgagaaagaggaggcccagagagagggaggagaggtgcagcgggggccgaaaagg
gaaagccactcctctgttaaagcgaagaatcctggctttgatggtcgctggtacactgac
atcaacaacaccatccctgtgcatgaagaaaacaaggagatccaagggagagaggagaaa
gagaagacaagctgcctttcttcagaagaccaggagagggagttttgggagaaaccttgt
gcctatactccagagtcacgcctggaggctcaccgccaccttgacgagaagaaaaaggca
aaagaaaggaaggctgtgaagacgcccaaggccccgaggactctgatcacaccccatgga
cgggtgatgaatgtcaatgaacccaagctggatttcaatctcacagaagatggggacaat
aacaccattgtcttggatctggaagtctacaggcatatggacacttccctgatggatgtt
gatgttcaaccaacgtacgcccgagtgactgtcaaaggaaagatttttcagctggtgctg
cccgcagaagtgatgcctgacagctcgacagcgaagaggtcccaaatcaccggccacttg
gtcctcacaatgccaaaggctcagggtgaaatcaaaatggcaacccctcatcctcccaaa
gtttctcaaagcagcaacacacctgaagagaagacaaggaaaggtaacaacctgcagagg
ttggaggtggatcccagtaaacactcaggggtcgacttggccaacattgtcccacgagag
aacaggactggagagcagaccatcttttatgataactttgtggacgacccagacgttccc
cctttgatgtga
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