Oncorhynchus nerka (sockeye salmon): 115114061
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Entry
115114061 CDS
T07952
Symbol
amph
Name
(RefSeq) amphiphysin isoform X1
KO
K12562
amphiphysin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115114061 (amph)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115114061 (amph)
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
115114061 (amph)
Bin/Amphiphysin/Rvs (BAR) family proteins
N-BAR proteins
115114061 (amph)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
115114061 (amph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR
SH3_9
SH3_1
SH3_2
HD_3
Arfaptin
BRISC_FAM175B_helical
Motif
Other DBs
NCBI-GeneID:
115114061
NCBI-ProteinID:
XP_029497852
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All DBs
Position
LG9b:complement(2377368..2522354)
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AA seq
798 aa
AA seq
DB search
MAEIKTGIFAKNVQKRLSRAQEKVLQKLGKADETKDDHFDQAVQNFKRQETEGSRLQREM
KAYLAAVKAMQQASMNLTESLHEVYEPDWHGKDDVLSIGKNCDVLWEDFHQKLVDSSLIT
LDTYLQQFPDLKIRVAKRSRKLIDYDSARHHLETIQAVVNRSDRKVSKAEDELKKAQKVF
DELNVDLQDELPTLWDSRVGFYVNTFKNVTNLEAKFHREISVLCKQLYEVMTKLGEQHSD
KMFTIQGAPSDSGPLRLSRAPSPPDSDSDESPVDTPNHMLAPASPGPPRPKSPSGQFKKG
PPVPPPPKTPTKELHQEQIIDLFGGQFLPAATPSQPNERPGESLLDLDFDPFQPDGNTTI
GQAAPTITQQLPWDLWTGNAEPVQPMDSGSMSTVGVEEDGGGGGEAPNTADFNPGFPAFP
EQAGDPSFATDWAADFGSAPAKGDSVPSATEAATSEVPATTGQDEAQGWPAADGWGGKAG
EAAAAEQPQGAETAAAGDEVTNNAFNGFPQMEATAPTFVADFDKLNESNVTMAPEPAAPP
AETAVAREATAETAVAREATAETAVAPEVLGTETSDATEAAAEAGEIQEPASPTSEAEAA
ESATSPGEEKPDSTVGSPVTSAEPEGASPTEILPVEEAEKAFPSETAPPESVPTPEEMKE
SPVEETPEKMPIPSVVIEPASSNEGDDDRDIIDISPTTISDNGVTADTQAAKDITTFDGP
PGLPPGFLYKVETLHDFEAANSDELELKKGDVVLVVPTATAEDQDAGWLTGIKESEWSHL
GASAHKGLFPENFTQRLE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaataaagacggggattttcgccaaaaacgtccagaaacggctaagcagggca
caggaaaaggtactgcagaaactgggaaaggcggatgagacgaaagatgaccattttgat
caagccgtccagaacttcaagcgacaggagacggagggctcccggctgcagagggagatg
aaggcatatctggcggcagtgaaagcaatgcaacaggcttccatgaacctgacagagtcc
ctacatgaagtctacgagccggactggcacgggaaggacgatgtcttgagcatcgggaag
aactgtgatgtcttatgggaggacttccatcagaagctggttgattcatcacttatcaca
ctggacacgtacctgcaacagttccccgacctcaagatccgtgtggcgaaaagaagcaga
aagctaattgactacgatagtgcacggcaccatctcgagaccattcaggcggtggtcaat
agaagtgatcggaaggtctccaaggcagaggacgagttgaaaaaagcccagaaggtgttt
gatgagctcaatgttgatctgcaggacgagctaccaactctctgggacagccgagttggt
ttttacgtgaacacattcaagaacgtgacgaacctggaggccaaattccaccgggaaatc
tctgtgctctgtaagcagctgtatgaagtgatgaccaagctgggagagcaacactctgac
aaaatgttcaccatacagggagcgcccagtgattcaggacctttgcgactctctcgggcc
ccctcgccaccggacagcgacagtgacgagagcccagtggacactcctaaccacatgctg
gcgcctgcctctcccggcccgccccggcccaaatctccttcaggccagttcaaaaaggga
ccaccagtgcccccgccacccaagaccccgaccaaggagctgcaccaggagcagataatc
gacctgtttgggggccagttcttacccgcggctacgccctcgcagccaaatgaaagaccc
ggagaatctctcctggatctggactttgatccattccagcctgacggcaacaccactatc
ggacaggctgcaccaaccataacacagcaactaccctgggatttgtggacaggaaatgct
gaacctgtgcagcctatggattctgggtctatgagtactgtgggtgtggaggaggatggg
ggcggcggtggcgaggccccgaacactgccgactttaaccctgggttccccgcattcccc
gagcaggcgggagaccccagcttcgccaccgactgggctgctgacttcggctcggccccg
gcaaaaggagactctgtcccgtctgccaccgaggcggcaaccagcgaggttccagcgacc
acagggcaggacgaggcccaaggctggcctgcagcggacggctggggcgggaaggcaggg
gaggcagcagcagcagagcagccacagggggccgaaacggccgcagctggagacgaggtg
accaacaatgcatttaacggatttccccagatggaagcaacagccccaacatttgttgcg
gattttgataagctgaatgaaagcaatgtcaccatggcccctgaacctgccgcgccccca
gctgagactgctgtggcccgggaggcaacagctgagactgctgtggcccgggaggcaaca
gctgagactgctgtggccccggaggtccttgggactgagacctcagatgccacagaggca
gcggccgaggcaggggaaatccaggagcctgcttctccgactagtgaggctgaggcagcc
gagagtgccaccagccctggagaggagaagcctgattccactgtggggtctccagtgaca
tctgcagagcctgagggggcttcaccaactgagatcctcccagttgaagaggctgaaaaa
gcgttccccagcgaaacagctcccccggaatccgttccgaccccggaggaaatgaaggag
tcccctgtggaggagactccggagaagatgcctattccctcagtggtgattgagccagcc
tccagcaacgaaggtgacgatgaccgcgacattattgacatttccccaacgaccatcagc
gacaacggagtgacagcggacacccaggcggccaaagacatcaccaccttcgacggccca
ccaggactccctcctggcttcctttacaaggtggagactctgcatgactttgaagctgca
aactcagacgagctggagctgaagaaaggtgacgtggttctggttgttcccacggctaca
gcagaagatcaggatgcggggtggcttacaggtatcaaggaaagcgaatggtcgcacctt
ggggccagtgcccacaaaggactcttcccagaaaacttcacacagcgcttggagtaa
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