Oncorhynchus nerka (sockeye salmon): 115114101
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Entry
115114101 CDS
T07952
Name
(RefSeq) ATP-dependent zinc metalloprotease YME1L1-like isoform X1
KO
K08955
ATP-dependent metalloprotease [EC:3.4.24.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115114101
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
115114101
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
AAA_16
AAA_22
AAA_5
TIP49
RuvB_N
Mg_chelatase
IstB_IS21
AAA_33
AAA_17
AAA_28
DUF815
AAA_14
AAA_18
AAA_7
nSTAND3
Zeta_toxin
PhoH
AAA_25
Motif
Other DBs
NCBI-GeneID:
115114101
NCBI-ProteinID:
XP_029497945
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Position
LG9b:4878281..4929930
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AA seq
719 aa
AA seq
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MFSLSTTVQPQVTVPLSHLINALHYLKSSVGSSSSATAKPPRKQHASEQDLHSNEPTWSL
RDLGLSDLGVRQLDEIVSGVLPRLSQQGVPSSSSPSQKAWRTSHLSSQSFFHNKHGFFGG
KIGIDSPVFCRQIPSPLQSIFTELHYWPVWVQSRGFKTLRKHKRLQAGFERPMEPDGFTP
SFMKGLLTRDKGMEVETLDKLLKSKNIPDGQQDSFKTGFAEGFLKSQALTQRKQDYLRRT
RFILLVLLLVGLYGLSKTPFLSVRFRTTSGLDSVDPVQMKNVTFEHVKGVEEAKNELQEV
VEFLRSPEKFTVLGGRLPKGILLVGPPGTGKTLLARAVAGEADVPFYYATGSEFDEMFVG
VGASRIRNLFREAKANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLLAEMDGFKPNE
GVIIIGATNFPEALDNALIRPGRFDMQVTVSKPDVKGRTEILNWYLRKIKVDPDIEAGII
ARGTVGFSGADLENLVNQAALKAAVDGKNMVTLKELEFAKDKILMGPERRSVEIDKKNKE
ITAYHESGHAIVAYYTKDAMPINKATIMPRGPSLGHVSMLPEDDRWSETRAQLLAQMDVS
MGGRVAEEIIFGNEFITTGASSDFDAATKIARMMVTRFGMCERLGVMTYADQTKQSPETQ
AAIEHEVRILLKDSYERARALLKSHAKEHKNLATALLQYETLDAKEIKMVLEGKALEIR
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttgtcaacaacagtccaaccacaggtcactgtccccctgagtcacctgatc
aatgccctccactacctgaagagctcagtgggaagcagcagcagtgccactgctaaacct
ccgcggaaacagcatgcctcagaacaggacttgcatagtaacgagcccacgtggagcctg
agggacctgggcctgtctgacctgggcgtgcggcagctggacgagatagtgagcggtgtg
ttacctcgtctgagtcaacagggtgtgccgtcctcatccagccccagccaaaaggcctgg
aggacctcccacctgtcctcacagtcattctttcacaacaagcatgggttctttggtggc
aaaattggcattgactcccctgttttctgcagacagatcccctcacctcttcaatccatt
ttcacagagctccactactggccagtgtgggtccaaagccgaggctttaaaactctaagg
aaacacaagcgactgcaggcaggctttgagcgtcccatggaaccagatggctttacccca
tcttttatgaagggcctcctgacgcgtgataaggggatggaggtggaaaccttggacaag
ctcctgaagagcaagaacattccagatgggcagcaagattcttttaagactgggtttgcc
gagggattcctaaaatcccaagcgctgacacagcgcaaacaagattatctgaggaggaca
aggtttatactgctggtcctgctgctggtgggactctacggcctctccaagacccccttc
ctatcggtgcgattccgaaccacatcaggcctggactcggtggaccctgtccagatgaag
aacgtgacatttgagcacgtcaagggggtggaggaggccaagaacgagctgcaggaggtg
gtggagttcctccggagcccagagaagttcaccgtcctcggagggagactgccgaaaggg
atcttgctggttggcccccctggcactgggaagactctgttggccagagccgtagctgga
gaggccgacgtccccttctattacgccaccggttcggaatttgatgagatgtttgtgggg
gttggagccagtcgcatcaggaaccttttcagggaagctaaagccaacgccccatgcgtg
atcttcattgatgagttggacagcgtcggagggaagagaatcgagtctcccatgcaccct
tactccagacagaccatcaaccagctactggctgagatggacgggttcaaaccaaatgaa
ggggtcatcatcatcggggcgacaaacttccctgaggctttggataacgctctgattagg
ccgggacgttttgacatgcaggtcactgtctccaaaccagacgtgaaaggacgcacagaa
atcctcaactggtatttaaggaagatcaaagtagaccctgacatcgaggctgggatcatc
gccaggggcacagtgggcttctccggggccgacctggagaacctggtgaaccaggcagct
ctgaaagcggcggtggatggcaaaaacatggtgaccctcaaagagctggagtttgccaag
gacaagatcctcatgggcccagagaggaggagtgtggaaattgacaagaagaacaaggag
atcacagcgtaccatgagtctggccacgctatcgtggcgtactacaccaaggacgccatg
cccatcaataaggccaccatcatgcccagaggtccttccctgggtcatgtgtctatgctc
ccggaggatgaccgctggagcgagacgcgtgctcagttgctggcccagatggatgtcagc
atgggaggccgcgtggcagaggaaatcatatttggcaatgagttcattaccactggggca
tcaagtgactttgatgctgccaccaaaattgcaagaatgatggtgaccagatttggaatg
tgtgagaggctgggtgtcatgacctatgccgaccaaacgaaacagagcccggagacacag
gctgccatcgaacatgaagtcaggatacttttaaaggattcgtacgagcgggccagggcg
ctcctcaagtctcacgccaaggagcacaagaacctggccaccgccctgctgcagtatgag
acgctggatgccaaagagatcaagatggtactggagggcaaggccctagagatcagatga
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