Oncorhynchus nerka (sockeye salmon): 115114108 Help Entry 115114108         CDS       T07952                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04382   Cornified envelope formation one04510   Focal adhesion one04512   ECM-receptor interaction one04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115114108  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115114108   09142 Cell motility    04820 Cytoskeleton in muscle cells     115114108  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115114108  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:one04147]     115114108    00536 Glycosaminoglycan binding proteins [BR:one00536]     115114108 Exosome [BR:one04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115114108 Glycosaminoglycan binding proteins [BR:one00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115114108 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  115114108 NCBI-ProteinID:  XP_029497958 LinkDB All DBs Position LG9b:5148970..5210141 Genome browser AA seq 1655 aa AA seqDB search MRTALLCFVLLGMMLLGIEAKDCACTGKSRCHCEGVKGNKGEKGYSGETGLPGSVGYPGS EGHPGSVGPKGDVGPHGPPGQYGNRGPEGKEGFAGTPGLPGIPGLQGPMGQQGASGCNGT EGKRGSTGPPGLHSSDGLRGSPGAPGPKGEPQTIGSGPPGPRGRDGDQGVSGSPGPTGPP GEAGLLGVEGLIGLHGAPGLKGQEGRSSSIPGPRGLKGHQGPPGVPGPKGIKLYAHAPFD MKGEIGELGEKGCKGSLGYAGHIHFKGAKGDQGDVGTEGRPGKDGDRGPAGYKGRNGNHG SAGPDGIPGPWGQKGGQGQDGDPGEVTMIGEAVFGSGGAKGQQGFAGPPGPTGVTGPPGS TGFQGPPGSPAPNYGDDPYNRGAIGPKGDKGDQGPIIDGEPGREGFPGTTGESGDPGPPG PSGDSGNLKGFIGPPGEKGAKGLTGEQGYSGQYGLKGQKGEVCRLCTGKGSGEQGPPGPP GQPGFPGFNAGPGPKGEPGIKGPSGPPGQPGPHGPSGVPGPPGMKGNPGSHNHRGIKGEK GSPGLAGRSGKDGNHGNTGFPGRKGQRGPKGDPYYGPPGLKGDGGVPGPPGPQGYQGPDG LPGPVGIGSLGHPGSKGNSGVPGLPGIAGYPGQKGEPSKRVAYQGVPGPPGQMGLPGLQG PPGPRGSVGLHGLHGYQGEKGDSGVFSTLGGRGPTGTKGDKGHPGPPGTSGSGYPGRPGT LGIPGVPGSKGDVGFGAPAPVGPNGFQGDVGARGPPGDPGLLGRPGNPGPIGLNGSPGPK GSKGGVGSQGPPGYAHTDCTGATTGPPGPPGPAGRPGPPGLNGQTGALGASGAPGFGRSG PAGDPGPPGVSGPGVQGLDGQKGGRGRDGLTGTPGPRGDPGLDGRSGSGPDGFPGSGGQP GPRGSDGRDGDKGHRGVPGPVGDKGTTGPSGPAPITDLYGLPGDPGQLGLPGFPGARGDP GYPGPKGIDGRDGDPGKHGPIGPPGDRGADDLYSVGGPGQSGPRGDIGSMGLPGPHGIKG VLGYHGGLGQDGRPGPYGPKGTKGEPSYAQPGRIGPPGQKGEPALCNSHGSKGERGSPGC AGRPGSQGPTGAKGDPGHHGHHGPLGPAGPPGTDGPPGPPGPTPSYGAPGQPGLPGPPGL FGPKGNQGRDGIPGPAGQKGETLIVGSTPGLRGENGQPGPKGDVGFPGPTVLGPPGFTGD QGIEGPQGPRGEPGHRAVCLKGLKGDTGPHGRPGSPGRRGPRGQPGSGGDGHKGDRGDTG SPGGRGFDGPRGDPGLPGPWGPRAIPGPPGPIGDPGHPGPPGFPGETGDHSYNPGTKGPN GAKGRPGPPGRPGLDVSGQVRFYQGDPGPLGHPGKQGLPGPSGLPGRPGFSGPTGPKGQH GHSPPGLPGFPGRKGDKGSPGRTGPVGYQGSPGQKGSRGPWGSSTAGLADSFLLARHSQT IRVPDCPRGTTLIYSGYSLLFINGNERAHGQDLGSMGSCLPRFSTMPFLFCDTDNTCRYA ARNDYSYWLSTEKPMPRSMDLIRGDEIGSYISRCSVCEGSSNAIAIHSQTTQTPDCPRDW ESLWPGYSFVMQTGAGAEGSGQPLVSPGSCLEHFRQVPFIECHGRGTCNYFPDSYSYWLA SIDPNRMFSKPVPQTVKGRLLENVISRCRVCRKPY NT seq 4968 nt NT seq  +upstreamnt  +downstreamnt atgaggacagcattgctttgtttcgtgctcctggggatgatgttgctgggaattgaggcg aaggattgtgcttgtactgggaagtcgaggtgtcactgtgaaggagtcaaaggcaataag ggagaaaagggttactcaggagagactggtctacctgggtcggttggctatccgggctca gagggtcaccctggatcagtgggaccaaagggggacgtgggccctcatggacctccagga caatatggcaatcggggacctgagggtaaagaaggatttgctgggacaccaggtctaccg ggcatcccaggccttcaaggaccaatgggccaacaaggtgcctccggatgcaatggaaca gaggggaagaggggttcaactggtccacctggtctccacagcagtgatggattaagaggt tcacctggagcacctggaccaaagggtgaacctcaaacaattggaagtgggccacctgga cctagaggaagagacggtgaccagggtgtctctgggtcaccaggaccgacgggaccacca ggggaagctggacttcttggggttgagggattgataggcctacatggagcaccaggatta aagggtcaagagggacgcagctctagtatccctggccctcgtggtctaaagggacaccaa gggccccctggagtcccgggaccgaaagggatcaagctatacgcccacgctcccttcgat atgaagggagagataggtgaactgggtgagaagggctgtaagggttcacttggttatgct ggccacatccattttaaaggagcaaaaggggaccaaggggacgttggtactgagggaagg ccagggaaggatggggatcgaggacccgctggatataaggggagaaatgggaatcacggt tcagcaggtcctgatggaatccctggaccatggggacagaaaggtggtcagggtcaagat ggtgaccccggggaggtgaccatgattggtgaggccgtgtttggctccgggggtgccaaa ggacaacaagggttcgctggccctccaggtcccactggagttactggtcccccaggtagc accggtttccaggggcctcctggatctccagctcctaactatggagatgatccctacaat cgcggagcgattggacctaaaggagataaaggagaccaaggacccatcatcgacggcgag ccaggcagagagggctttccaggaacaactggggaaagtggagaccctggacccccagga ccatctggagactcaggaaatcttaagggctttataggacctccaggggaaaagggagcc aagggcttgacaggcgaacaagggtacagtggccaatatggtttaaaaggtcagaaagga gaggtctgtaggttgtgtacaggaaaaggttctggagaacagggacccccaggacccccc ggtcagcctggattcccaggctttaatgcaggaccagggcccaaaggagagccaggaatc aaaggcccatcaggaccacctggtcaaccgggtccccacggcccctcaggtgttccaggg cccccggggatgaagggaaatccaggttcccacaaccaccgcgggataaagggagagaaa ggatctccaggactagctggcagatcggggaaggatggaaatcacgggaacactggcttc cctggacgcaagggccaacgaggccccaagggtgatccgtactatgggccgccgggtctg aagggagatggtggtgtcccaggccctcccggaccacagggataccaaggaccagatggg ttgccaggtccagtaggcataggatctcttggccacccaggatccaaaggcaatagtggg gtaccaggtctacctggcatagctggctacccaggtcagaaaggtgagcccagcaaaaga gtggcttaccagggagtcccaggtccaccaggacagatgggtctgcctgggttacagggc cccccaggtcctcgtggtagtgttggtttacatggactacatggttaccagggggagaaa ggagacagtggtgtattctccaccctgggaggacgaggacccactggaacgaaaggtgac aaagggcacccgggacccccaggtacctctggaagcggctaccctggacgaccgggcaca ctgggaatccctggggttccagggtcaaagggtgatgttgggtttggggccccagctcca gtcggccctaacggtttccaaggtgatgttggggcccggggacctccaggagacccaggg ctactgggacgaccagggaatccaggaccaataggcctcaatgggtcaccaggccccaaa ggaagtaaaggtggggtaggttcccaaggaccacctggttacgcacatactgactgcaca ggagccacaaccggaccacctggtccgccaggaccagcaggcagacccggacctccaggt ttaaatggacagacgggtgcgcttggggcctctggcgctccaggttttggacgttcaggc ccggctggtgaccctgggccccctggggtctccggacccggagtgcagggactagatgga cagaagggaggcagagggagagatgggttaacaggcacaccaggtcctcgaggtgatcct gggctggatggaagatctggatcgggccctgacggattccctggatctggaggacaaccc ggacccagagggtcggatggccgtgatggggataaaggccatagaggtgtaccaggccct gtgggggacaaaggaaccacaggtccttctggaccagcacctatcacagacttatatggg ctcccaggggaccctggacagcttggtctgcctggttttcctggtgcaagaggagaccct ggatatcctggaccaaaaggcattgatgggagggatggtgacccaggaaaacatgggcct ataggtcccccaggtgatcgtggggccgatgacctatattcagtaggaggaccaggccaa tctggacccaggggagatattgggagcatgggtttaccgggtccccatggaataaaggga gttctgggttaccatggaggcctgggacaagacggtagacccggtccatacgggcctaaa ggaactaaaggagagcccagttatgctcaaccaggccgcataggaccacctggacaaaag ggcgagccagccttgtgtaacagccatggttccaagggagagagaggctctcctggttgc gcaggtcgtccaggctcccaagggcccactggagccaaaggagacccaggacatcatgga catcatggacccctaggtcctgcagggccaccaggtaccgatggtcctccaggcccccca ggacccactccgtcatatggagctccaggacaaccagggttacctggccctcctggtctc tttggtcctaaaggtaaccagggtcgcgatggcattcctggacctgctggtcagaaggga gagacattgattgtggggtcgactcctggcctacgtggagagaatggacagccaggtcca aagggagatgtgggttttcctgggcccactgttttggggcccccagggtttactggagac caaggcattgaaggaccccaaggtcctcgtggtgagccagggcaccgagccgtttgtctc aaagggctgaaaggagacactggtcctcatggcagacctggaagccctgggcgacggggt ccacggggacagccagggtctggaggtgatggacataaaggggacagaggagacacgggc tctccagggggccgaggcttcgacgggcccagaggggacccagggcttccagggccgtgg ggaccaagagccatccctggacctccaggaccaataggtgacccaggtcatcctggacct ccaggattccccggtgagacgggtgatcatagttataaccccggcacgaaaggaccaaac ggggccaaaggccggccaggaccaccaggtcgtccagggcttgacgtgtctggacaagtg agattctatcaaggggatccaggcccacttggtcaccccgggaaacaaggacttccaggt ccaagtgggctgccaggacggccaggattttcaggccccacgggcccgaagggtcagcat ggacacagccctccaggcctgcctgggttccctggacgcaagggggacaagggatcaccg ggacggacagggccggtgggctaccaggggtctccaggacagaagggttctcgtggcccg tggggctccagcacggcaggcctggctgacagtttcctgcttgcccgacacagccagacg atcagagtgcctgactgccccagaggtaccaccctcatctactctggatactctctgctc ttcatcaatggcaatgagagagcccacggacaagacctaggctccatgggcagctgccta ccacgtttctccaccatgcccttcttgttctgtgacacggacaacacctgtcgctacgcc gcccgcaatgactactcctattggctgtcgacggagaagcccatgccgcgcagcatggac ctaatcagaggagatgagatagggagctacatcagcaggtgttcagtgtgtgagggcagc tccaatgccatcgccatccacagccagaccacccagaccccagattgtcctcgtgactgg gaatccctctggcctggatactcctttgtcatgcaaacgggtgcgggtgctgaggggtcg gggcagccgctagtctccccaggctcgtgcctggaacacttccgccaggtccccttcatc gagtgccacggccggggaacctgcaactacttcccagattcctacagctactggctggcc tcgatcgacccaaatcgcatgttcagtaagcctgtgccccagactgtgaagggacgtctt ctagagaatgtcatcagtcgctgccgcgtctgcaggaaaccctattga

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