Oncorhynchus nerka (sockeye salmon): 115114146
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Entry
115114146 CDS
T07952
Name
(RefSeq) eukaryotic initiation factor 4A-II
KO
K03257
translation initiation factor 4A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115114146
03012 Translation factors [BR:
one03012
]
115114146
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115114146
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115114146
mRNA cycle factors
Stress granule specific factors
115114146
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
eIF-4
115114146
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115114146
Exosomal proteins of bladder cancer cells
115114146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Flavi_DEAD
UvrD-helicase
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
115114146
NCBI-ProteinID:
XP_029498022
LinkDB
All DBs
Position
LG9b:complement(7126693..7136427)
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AA seq
419 aa
AA seq
DB search
MLKFELIMSSDSPDYNSSRDREHDAGPEGMEPDGVIESNWNEITDNFDDMALKETLLRGI
YAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQLDMEQKETQALVLA
PTRELAQQIQKVILALGDYMGAACHACIGGTNVRNEMQKLTAEAPHIVVGTPGRVFDMLN
RRYLSPKCIKMFVLDEADEMLSRGFKDQIYEIFQKLSTNIQVVLLSATMPADVLEVTKKF
MREPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQAVIFLNTRRKVDW
LTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINY
DLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVDEMPLNVADLI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagtttgaactgatcatgtctagcgattctcctgattacaacagctcaagagat
cgtgagcatgacgcagggccagaggggatggagcctgatggtgtcatcgagagcaactgg
aatgagattacagacaactttgatgacatggccctgaaggagacactccttaggggtatt
tatgcgtatggttttgagaagccatcggccattcaacagagggcaatcattccttgtatc
aaaggctacgatgtcattgcccaagcccagtcaggcactggcaagactgccacgtttgcc
atctctattttgcagcagctggacatggagcagaaagagacccaggctttggtactggcc
cccaccagggagctggctcagcagatccagaaggtgattctggctctgggagactacatg
ggggctgcctgccacgcctgcattgggggcaccaacgtccgcaacgagatgcagaagctg
acggccgaggccccccacatagtggttgggactccaggccgggtgtttgacatgcttaac
aggagatacctgtctccaaaatgcatcaagatgtttgtcctggacgaagctgatgagatg
ctgagtcgtggttttaaggatcagatctatgagatctttcagaaactgagcacaaacatt
caagtggtcctcctctctgctaccatgcctgcagatgtcctggaggtgaccaagaagttc
atgcgagagcccattcgcatcctggtgaagaaggaggagcttaccctggagggtatcaag
cagttctacatcaatgtagagcgcgaggagtggaagttggacacgctgtgtgacctgtac
gagactctgacaatcactcaggcagtcatcttcctcaacaccaggaggaaggttgactgg
ctgacggagaagatgcacgcaagggacttcactgtctctgctcttcatggagacatggat
cagaaggaaagggatgtgatcatgagggagttccggtctggctccagcagagtgctcatc
actactgacttactggctcgaggaattgatgtgcagcaggtttcccttgtcataaactat
gaccttcctacaaaccgagagaattatattcaccgaattggtcgcggtggccgttttggc
cgaaaaggcgtggctattaactttgtgaccgaagaggacaagcgtatccttcgggatatc
gagacgttttacaatacgacagttgatgagatgcctttgaacgtggctgacctgatttga
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