Oncorhynchus nerka (sockeye salmon): 115114168
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Entry
115114168 CDS
T07952
Name
(RefSeq) high affinity nerve growth factor receptor-like
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
one04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115114168
04020 Calcium signaling pathway
115114168
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115114168
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115114168
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115114168
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
115114168
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
LRRCT_2
LRR_8
ig
Ig_2
TrkA_TMD
LRR_5
C2-set_2
Atypical_Card
C2-set_3
Motif
Other DBs
NCBI-GeneID:
115114168
NCBI-ProteinID:
XP_029498066
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Position
LG3:10733386..10762468
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AA seq
766 aa
AA seq
DB search
MLQCLEPNGIATIPMLALQESENVTEIYIENQADLENITEVDLANYRELKNLTVTFCRLA
YISANAFQHNLKLQYVNLASNSLEHISWKVFHFLPLLNLVLRDNPLECSCDIHWLQRWQL
NDHSDLDNQPLHCLSNGHARRLDSLVMKNCTIPEVAIVHANTKVQEGGNLTFVCQVTGVP
VPVVRWRTNKLLSRYTVQERFWGSTLELELQLWNMSSEDNLHNLTCEAENRAGPGDEKVT
LDIEFPAKIIFLHNAEQQHHWCFPFKVDGNPEPSIRWLFNGSNLTEGLYTYTQFIPDSDD
GSVKHGCLFLNKPTHLNNGLYTIIVGNRLGVDQATATGMFMDNPFDPFDPEGIIPVLEES
DPLPTNKSNEDVTENLESRVFGVSVAVGLAVFACTFLLIMVLVINKCGQQSKFGIHRSSV
LGTEDDLAVSLRFMNLGASPPSSDDSGMSSFVENPQYFCGIFKDKDMCVQHIKRQDIVLK
WELGEGAFGKVYLAECANLSPDSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQNIV
RFYGVCTDGEPLAMVFEYMRHGDLNRFLRAHGPDAHILEEVKMPPLGQLTLPQMLNIAAQ
IASGMVYLASLHFVHRDLATRNCLVGDMGEGLMVKIGDFGMSRDIYSTDYYRVGGRTMLP
IRWMPPESIMYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPR
TCPKEVHGLMQGCWQREPQQRLVIKDIHSRLLALVKSPPIYLDILG
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgctacagtgcctggagcccaatggcattgccactatacccatgttggcactacaggag
agcgagaatgtcacggaaatttacatcgaaaatcaagccgacctggagaacattacagaa
gtagaccttgccaactatagagagttgaagaatctcacggtcacgttctgcaggctggcg
tacatctcggcgaatgctttccaacacaacctcaagctccaatatgtaaacctggcatct
aactccctggagcatatcagttggaaggtgttccattttcttcccctgctcaacctggtt
ttgagggacaacccccttgagtgctcctgtgatatccattggctgcagcgatggcagctt
aacgaccacagtgaccttgacaaccaaccgctgcactgcctctccaatggccatgcccga
cggttggactccttagtgatgaagaattgcactataccggaggttgccattgtccatgcc
aacaccaaggtccaggagggaggcaacctgacatttgtgtgtcaggtgacaggagtgccc
gtgcctgtagtgaggtggcgcacaaataaactgctgtctcgctatactgtacaggagagg
ttctggggctccactttggagctggagctgcagctgtggaacatgtcctcagaagacaac
ctgcacaacttgacctgtgaggcggagaaccgggccgggcctggggatgagaaagtgacg
ttggacattgaatttccagccaaaatcatattcctgcacaacgccgagcaacagcaccac
tggtgtttcccctttaaggtggacgggaaccctgagccatccatccgctggcttttcaac
ggctccaacctgaccgagggcctctacacttacacacagttcattcccgactcggacgac
ggctctgtgaagcacggttgtctatttctcaacaagcccacccacctgaacaacggcctc
tacaccatcatcgtggggaacagactgggcgtggaccaagctacggccacggggatgttc
atggacaacccctttgacccctttgatcctgagggcatcatcccagtccttgaagaaagt
gatccacttcccaccaacaaatctaacgaggatgtcactgagaacctggagagcagagtg
tttggggtgtcggtggcagtgggtctggctgtgtttgcttgcaccttcctcctcattatg
gtactggtcatcaacaagtgtggccagcagtccaagtttggtattcaccgttcatctgtc
ttgggaacagaggatgatcttgctgtttcactgcgtttcatgaacttaggggccagccct
ccttcctctgatgactctgggatgtccagctttgtggagaacccccagtacttctgtggc
attttcaaagacaaagacatgtgtgtgcagcacatcaaaagacaggacatagttctgaag
tgggaactgggtgagggggcgtttggcaaagtctacctggcagagtgtgccaatctcagt
ccggacagtgacaaaatgctggtggccatcaagactctgaaggatgccaacgagtcgacc
cggcaggacttccagagagaggctgagctgctcacagtcctccagcaccagaacatcgtt
cgcttctatggagtgtgtacagacggagagccactggcgatggtgtttgaatacatgaga
catggagacctcaaccgcttcctcagggcgcacggtccagacgcccatatcctggaggag
gtgaagatgcccccgctgggccagctcactcttccccagatgctgaacatcgccgcccag
atcgcctcaggcatggtctacctggcctcccttcactttgtgcaccgggacctggccaca
cgaaactgcctggtgggagatatgggagagggtctgatggtcaagataggagactttggc
atgtcccgggacatctacagcacagactactacagggtgggtgggcgtacgatgcttcct
attcgctggatgcccccggaaagcatcatgtacaggaagttcaccacggagagtgatatc
tggagctttggagtggtcctctgggagatcttcacctatgggaaacagccctggtaccag
ctctccaacagcgaggctatcgagtgcattacacagggccgggagctggagagaccacgc
acttgccccaaggaggtacacggcctgatgcagggctgctggcagagggagccccagcag
agactggtcatcaaggacatccacagccgcctcctggccctggttaagagcccccctatc
tatctggacatcctggggtag
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