Oncorhynchus nerka (sockeye salmon): 115114210
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Entry
115114210 CDS
T07952
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2-like isoform X1
KO
K04942
potassium intermediate/small conductance calcium-activated channel subfamily N member 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115114210
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
115114210
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF7310
DALR_1
Motif
Other DBs
NCBI-GeneID:
115114210
NCBI-ProteinID:
XP_029498136
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Position
LG9b:complement(9660223..9722184)
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AA seq
970 aa
AA seq
DB search
MRHRYAGAVYQHQIPDEERGSVQSQDPNPVAPVFSLPPPPPSFRERSTTTSHYLNHHQLP
CLSKPSRRGIHACQPQHGDPPPLTSYDIAQRPSHRVCKPAGQPAHLQQNLWAAAGSQPQS
EQPFFQSYHCNFSEEASLSHQRQRQPLAHPPQPSPSLPPSSSLLFLQESNHGDNLQSSDN
YQQASNVERYQGGGGGGHRDQKQLLQQQQQQHSRLQHRDPSPETTRANSQKGRTINVCES
IEANRRAFQSQTQDLQQLQQLPQLRAQQQLLVGSSFPVYYCANGSGELCRNNQATLLQQH
QQDAQGRPQHCDQDRNKPGRTNQANQPQHPNQPQHPNQPQHHCRDSRVNSPTQPYGGNSS
ATGSSSKSSPNYGSSYHLWPESPHKGEERILIDHHQATTEKKKLSHAGSSLSESSGRLPQ
IAMNTCKHNGGVVRPLGSLASSRRNLAELDSETQPLQTLHSSGLEVVVSKGNSEDPGKES
NESLVRDGNGAPVKKNKDIGYRLGHRRALFEKRKRLSDYALIFGMFGIVVMVTETELSWG
VYGKESSYSFALKCLISLSTVILLGLIIMYHAREIQLFMVDNGADDWRIAMTYERIFFIV
LELLVCAIHPIPGHYRFTWTARIAFTYTPSTANADVDIILSIPMFLRLYLIGRVMLLHSK
LFTDASSRSIGALNKINFNTRFVMKTLMTICPGTVLLVFSISSWIIAAWTVRVCERYHDT
QEVTSNFLGAMWLISITFLSIGYGDMVPNTYCGKGVCLLTGIMGAGCTALVVAVVARKLE
LTKAEKHVHNFMMDTQLCKRVKNTAANVLRETWLIYKHTKLVKKIDHAKVRKHQRKFLQA
IHQAQKLRSVKMEQRKLNDQANTLVDLAKTQNVMYDLVSELQERSEELDKRIGMLEDKLD
SVTGSLQALPCLISQAITQQQQEFLDGFLHRFRPASLGSERSERSERSWTSTARRRRSPS
TAPHTSSDSG
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgaggcatcgatacgcgggagctgtctatcagcaccaaatccccgacgaagagcgaggc
agcgtgcagagccaagacccaaacccagtcgctccagttttcagtctgccgccccctcct
ccgtctttcagagagcgttcgactaccacctcgcactacctgaaccaccaccaactgcct
tgtctgagcaagccctctcgaagaggtatccatgcctgtcagccgcagcacggcgacccc
ccgcctctgacaagctacgacatcgcccagcgaccttcacaccgggtctgtaaacccgcc
gggcagccagcgcacctacagcagaacctttgggccgcagccggttcccagccgcagtcg
gagcagcctttttttcagagctaccactgcaatttttccgaggaggcgagcctttctcac
cagcgccagcgccaacccctcgctcacccgccgcagccctccccatctttgccgccgtcg
tcctctctgctgtttttgcaggaatctaatcacggggataatttgcaaagcagtgacaat
tatcaacaggcgagcaacgtggaacgctaccagggaggaggaggaggagggcaccgagac
cagaagcagttgttgcagcaacagcagcagcagcacagcagactccaacacagggacccc
tcccctgaaacaacccgagcaaactcacagaaggggcgcactataaatgtatgtgagtca
atcgaggctaatcggcgagcattccagtcccagactcaggacctgcagcagctacagcaa
ctcccacaattgcgagctcaacaacagctactggtggggagcagcttccctgtatactac
tgcgccaacggttcaggagagctctgtcggaataaccaggcaacactgctgcaacagcat
cagcaagacgcacaggggcgtccgcagcactgtgaccaagaccgcaataagccagggagg
acaaaccaagccaaccagccacagcaccccaaccagccacagcaccccaaccagccgcag
caccattgccgcgactctcgtgtaaactcaccaacgcagccgtacggagggaactcgtct
gcgactggcagtagcagcaagagcagccctaactacggctccagctatcacctatggccc
gagagcccgcataagggagaagagaggatactcatcgatcatcatcaggcaaccactgag
aaaaagaagctgagccatgctggatcctccctctccgagagcagcggccgactccctcag
atagccatgaacacctgcaagcacaatggcggcgtagtgagaccactgggcagcctggcg
tcatcgcggcgcaacctagcagagctcgactccgaaacacagcccctccagacgctgcac
agttctggcctggaggtggttgtttccaagggaaacagtgaggaccccggcaaggagtcc
aacgagagcctggtcagggacgggaacggtgctcctgtgaagaagaacaaagacatcggc
tatagactcggccaccggagggcgctctttgagaagcgaaagagactcagtgactacgca
ctcatcttcgggatgtttgggattgtcgtcatggtgacggagacggaactgtcctgggga
gtttacggcaaggaatcttcgtactcatttgcactgaaatgccttatcagcctttccact
gttatattgcttggtcttataataatgtaccatgcccgggaaatccagctgttcatggtg
gacaatggggcggacgactggaggatagccatgacgtacgagcgcatcttcttcatcgtg
ctggagctgctggtgtgcgccatccaccccatcccgggccattaccgcttcacgtggacg
gcgcggatcgccttcacctacacgccatcgacggccaatgccgacgtggacatcatcctc
tccattcccatgttcttgcgcctctacctgatcggccgcgtcatgctgctccacagcaag
ctcttcacggacgcctcgtcgcgcagcatcggcgccctcaacaagatcaacttcaatacg
cgcttcgtcatgaagaccctcatgaccatctgccccggcaccgtgctgcttgtcttcagc
atctcctcctggatcattgccgcctggacggtgcgcgtctgcgagaggtatcatgacaca
caggaagtgaccagtaacttcctgggagccatgtggctcatctctattaccttcctctcc
attggctacggagacatggtacctaacacgtactgtgggaaaggcgtatgtctgcttaca
gggatcatgggagcgggctgcactgcgctggtggtcgccgtggtagccaggaagttggag
ttgaccaaggctgagaagcatgtccacaacttcatgatggacacacaactctgcaaacga
gtaaagaacacagctgccaatgtactcagggaaacatggctcatctacaaacacactaag
ctggtcaagaagatagatcacgctaaggtgcgcaaacaccagcggaagtttctacaggcc
atccatcaagctcagaaactacgcagtgtaaagatggagcagaggaaactcaacgatcag
gccaacacgctagtggacctggcgaagacccagaacgtgatgtacgacctggtgtcagag
ctgcaggagcgcagcgaggagctagacaagcgcatcggcatgctggaggacaagctggac
tcggtgacgggcagcctacaggcgctgccctgcctcatctcccaagccataacccagcag
cagcaggaatttctggacggtttcctgcaccgcttccggcctgcctcgctgggctcagag
cgctccgaacgctcagagcgctcctggacctccaccgcccgccgacgccgctcgccctcc
acggcaccacacacctcctctgacagcggctag
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