Oncorhynchus nerka (sockeye salmon): 115114273
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Entry
115114273 CDS
T07952
Name
(RefSeq) transcription factor E2F5-like isoform X1
KO
K04682
transcription factor E2F4/5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
one04218
Cellular senescence
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115114273
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115114273
04218 Cellular senescence
115114273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115114273
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
115114273
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GFIT
Motif
Pfam:
E2F_CC-MB
E2F_TDP
Motif
Other DBs
NCBI-GeneID:
115114273
NCBI-ProteinID:
XP_029498233
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Position
LG9b:12325611..12331089
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AA seq
385 aa
AA seq
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MAESVRSSLPNGGAASSRHEKSLGLLTIKFVTLLQEAKDGVLDLKVAADSLAVRQKRRIY
DITNVLEGVGLIEKKTKNIIQWRGENLGCQTAEVLEQVEVLTAQLCELEEQEKELDSQKA
WLEQSIKHMNDDPIASRYMYVTHEDICDAFSGDTLLAVVAPSGTQLEVPVPETGQRGQKR
YQVNLRSTSAPIQVMLINKESGSSRPVVFSVPPPEDLSSMPTPPTTPADLQRFPLPSDSA
HFPSPVTHHISEHKMAPLRRHDEDLTPSSTPPDIHMECHPQATTGLAMQQLVGMPTGVQQ
QGVLGGHLGQELQSMLDVGSLLKLTNTGDHMKEEREGVADLIDELMSSDVFPLLRLSPNA
GVDYNFNLDDNEGVCDLFDVQILNY
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtctgtgcgctcgagcctgccgaacggcggagccgcatcgagtcgacatgag
aaaagtttggggctcctcacaatcaagttcgtgactttactccaagaggcgaaggacggc
gtacttgacctgaaagtggctgcagacagcttggctgtgagacagaagaggaggatctat
gacatcaccaacgtgctggagggagtgggcctcatcgagaagaaaaccaagaacataatt
cagtggagaggggagaacctgggctgccagacagcagaggtgctggagcaggtggaggtg
ctgacagctcagctgtgtgagctggaggagcaggagaaggagcttgacagccagaaggcc
tggctggagcagagcatcaaacacatgaacgatgaccccatcgccagcaggtatatgtat
gtgacccacgaggacatctgtgatgcgttcagcggagacactctcctggcggtggtcgct
ccctcaggaacacagctggaggtaccggtgcctgaaacgggtcagagaggccagaagagg
taccaggtgaatctaaggagcacgtctgcgccgatccaggtgatgctcatcaacaaagag
tctggttcctccagacccgttgtgttctctgtgcctcccccagaggacctgtcttctatg
cctaccccacccaccacccctgcggacctgcagaggttccccctgccctctgactcagcc
catttccccagccctgtgacacaccacatctctgaacacaagatggcgccactgcgaagg
cacgatgaggatcttacaccctcctccaccccaccagacatacacatggaatgccaccct
caggcgactactggtctagcaatgcagcagttggtcggcatgccaacaggtgtccagcag
caaggggttctgggaggacacttgggccaggagctccagtccatgctggatgtgggcagc
cttctgaaattaaccaacacaggagaccacatgaaggaagagagagagggtgtggctgac
ctaatagatgagctgatgtcttctgatgtgttccctctgctgcgactgtctcccaatgca
ggggtggactacaacttcaacctggatgacaatgagggagtctgtgatctgttcgacgtc
cagatcctcaattactga
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