Oncorhynchus nerka (sockeye salmon): 115114280
Help
Entry
115114280 CDS
T07952
Name
(RefSeq) retinoic acid receptor RXR-gamma-A-like isoform X1
KO
K08526
retinoid X receptor gamma
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03320
PPAR signaling pathway
one04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115114280
03320 PPAR signaling pathway
115114280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115114280
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115114280
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
115114280
Nuclear receptors [BR:
one03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
115114280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
Nuc_recep-AF1
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
115114280
NCBI-ProteinID:
XP_029498243
LinkDB
All DBs
Position
LG9b:complement(12591195..12637707)
Genome browser
AA seq
506 aa
AA seq
DB search
MRIITGVEDSRGKTESDLIDVSQSELEMYGNYQSLMLITGFDNSSVQVSHLSSTPSQPLS
IMVGPPHPHHHHPHHHHHPSVISTTINPGRPHPSPISTLGSPFNGLGGSPYSVITSSSLG
SPGVSMPHTPTIGFSTLSSPQVNSLNSVSSSEDIKPPPGLAGLGHMNSYGCMSPGSMSKH
ICAICGDRSSGKHYAVYSCEGCKGFFKRTIRKDLTYTCRDSKECLIDKRQRNRCQYCRYQ
KCLAMGMKREAVQEERQRGRDKSDNEVESTSSFNGDMPVEKILDAELAIEPKTEAYMEAS
TGNSMNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASFSHR
SVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLF
NPDAKGLSNPTEVEALREKVYASLESYTKHRYPEQPGRFAKLLLRLPALRSIGLKCLEHL
FFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcataacaggtgttgaagattccagaggaaaaacggaaagcgacttaatagac
gttagccaatcagagttggaaatgtatggaaactaccagtccctgatgctcattactggc
tttgacaattcttctgttcaggtctcccacctgagctccaccccctcacagccccttagc
atcatggtgggcccccctcaccctcaccaccaccacccccatcaccatcaccacccctcc
gtcatcagcaccaccatcaaccccgggcggccccacccatcccccataagcaccctgggc
tcgccattcaatgggctgggcggctcgccgtactccgtcatcacgtcgtcctctctgggc
tcgccaggtgtctccatgccccacacgcccaccataggcttcagcacgctctccagccca
caggtaaactctctgaacagtgtgagcagcagtgaggacatcaagcctcctccaggcctg
gctggactgggtcacatgaacagctacggctgcatgagcccagggtccatgtccaagcac
atctgtgccatctgtggggaccgatcctcagggaaacactatgcggtgtacagctgtgaa
ggctgtaaaggcttcttcaaaagaaccatcaggaaggacctcacttacacgtgtcgagac
agcaaggagtgcctgatcgataagcgccaacgcaaccgctgccaatactgtcgctaccag
aagtgtctggccatgggcatgaagagagaagctgtgcaggaggagcgtcagcggggccgg
gacaagagtgataacgaggtggagtcaaccagtagtttcaacggggacatgccggtcgag
aagatattggacgcggagttggccatcgaacccaagactgaagcttacatggaggccagc
acaggcaactctatgaacgacccggtcaccaacatctgccaggcagcagacaagcagcta
ttcaccctggtggagtgggccaaaaggatcccccacttctctgagctgcccctggacgac
caggtcatcttattacgagcaggctggaatgagctgctcatcgcctcgttctcccatcgc
tctgtgacagtgaaggacgggatcctcctggccacgggcctccacgtccaccgcagcagc
gcccacagcgcaggagtgggctccatctttgacagagtgctgacggagctggtgtctaag
atgaaagacatgcagatggacaagactgagctgggctgcctccgagccatcgtcctcttc
aacccagatgccaagggcctgtctaatcctacagaggtggaggccctgagagagaaggtg
tacgcctcgctggagtcctacactaaacatagatacccagagcagcctggcagatttgcc
aagctgttgctgcgtctgcctgcactgcgctccatcggcctcaagtgtctggagcacctc
ttcttcttcaagctgatcggagatacgcccatagacacgttcctcatggaaatgcttgaa
gcgccgcaccagatcacatga
DBGET
integrated database retrieval system
