Oncorhynchus nerka (sockeye salmon): 115114294
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Entry
115114294 CDS
T07952
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U-like
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115114294
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115114294
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115114294
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115114294
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Type II RPTP family
115114294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fn3_PTPRU
Y_phosphatase
MAM
fn3
ig
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_3
Ig_2
I-set
PTP_tm
FAM176
Motif
Other DBs
NCBI-GeneID:
115114294
NCBI-ProteinID:
XP_029498274
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All DBs
Position
LG3:21947110..22248768
Genome browser
AA seq
1043 aa
AA seq
DB search
MNTCAFLLLLAVQIYAEGIEGPTAAGCTFDEDSEPSLCDFTQGEEDDFDWQLYRTHNSPY
ASSDLLPGSYMLVNSSQHAAGHRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRAYV
RVNGGPLGNPVWNTSGSHGRQWHQVELAVSTFWPNEYQVRIEATVSRERRGYIAMDDIML
LTYPCYKAPHFSRLGDEEVNAGQNATFQCVASGRASEAEKFLLERPSGDVIATALVKHLS
HRRFVASFQVDSVQRNDQDLYRCVTQSSRGSGVSNFAELIVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASHSPWSEVHGVNMVSYKLWHLDPDTEYHISVLLTR
PGEGGTGPPGPPLISRTKCAEPTRALRGLTASEIQSRQLTLQWETLAYNLTRCHTYSVSL
CYRYATAGGGGGHNTTVRECLAVEHNASRFTLRDLPAYHSIRVRLALANPEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLRNETYHMFSNLHPGTTYLISVRARTTKGFGQTALTEITTNISAPMFDYGDMP
SPLSETERTITVLLRPALGRGAPVSTYQVVVEEESGRKVKRELGVQDCYPLPMSHGEAQA
RGTPHYYTAELPPSSLLEASPFTVGDNHTYNGYWNTPLDPRKSYLVYFQAMSNFRGETRI
NCIRIARKAACKDHRRALEVSQHSEEMGLILGVCAGGLVVLILLLGAIIIVIRKGKPVNI
NKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSAARMAHTCSTRSEQRSSVNESSSL
LRGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFFDGWDCTK
KKDKTKGRHDTLMGCKSSWTCQPSCDESTDHHDCHRVKLHPLLGDPNSDYINANYIDGYH
RSNHFIATQGPKQETVYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDDSEMYGDIK
ITLLKTETLSEYTVRTFAMERSN
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgcttttctgctgctcctggccgttcaaatctacgccgaaggcatagag
ggaccaacagcagcaggctgcacctttgacgaggattctgagcccagtctgtgtgacttc
acccaaggcgaggaggatgactttgactggcagctctaccggacacacaactcgccctac
gcctcttctgacctcctgcctggttcctatatgctggtgaactcttcccagcatgctgca
gggcatcgcgcccagctcctgctgcagacgctgagtgaaaacgacacacactgcgtccag
ttcagctacttcctgtacagccgcgatggccacagtccaggggcactgcgggcgtacgtt
cgggtcaacggcggcccgctgggtaacccagtatggaacacgtcggggtcccacggacga
cagtggcaccaagtggagctggctgtcagcaccttctggcccaatgagtaccaggtccgg
atcgaagcaactgtttccagggagcggcgaggctacatcgccatggatgacatcatgctc
ctgacctatccctgttataaggcgccccacttctcccggctgggagatgaggaagtcaac
gctgggcagaatgccaccttccagtgtgtggcatcgggccgggcatcggaagctgagaag
ttcctactggagaggcccagtggggacgtgatagctacagccttggttaagcacctgagt
caccggcgctttgtggcctcattccaggtggacagtgtgcagcgcaacgaccaggacttg
taccgatgtgtcacccagtcctccagaggctctggggtctccaacttcgctgagctcatt
gtcaaagttccaccctctcctattgcgcccccacagctgctgcgagcgggctccacatat
ctgatcatccagctcaacacgaactccatcctgggagatggccctatcatcaggaaggag
attgagtaccgggccagccactcaccttggtccgaggtccatggggtcaacatggtcagc
tacaagctgtggcatctggacccagacacggagtatcacataagtgtgttgctgacccgg
cccggagagggcggcaccggaccacccggaccacccctcatcagcaggactaagtgtgca
gaaccaacacgggccttgcgaggtctcacagcctcagagatccagtccaggcagctgacc
ctgcagtgggagacgctggcctacaacttgacccgctgccacacctactctgtgtccctg
tgctaccgctatgccaccgcagggggcggcggcgggcacaacactactgtgcgcgagtgc
ctggcggtggagcacaatgcctcacgcttcaccctgcgcgacctgccggcctaccattcc
atccgggtccgtctggcgcttgccaaccctgagggcaagaaggagggtcgggaggtcacc
tttcagactgaagaggacatacccggtggcatcgcccctgaatcgctgaccttcaccccc
ctggaggacatgattttcctcaagtgggaggagccagtggaacccaatggtctcatcacc
caatacgagatcagctatcagagcattgagtcgtctgacccgggcatcaacgtgccagga
cctaggagaacagtgtcgaagttgaggaacgaaacctatcacatgttctccaaccttcac
cctggcaccacatatctgatttctgtccgcgcccgcacaaccaagggcttcggccagacc
gccctaactgagatcaccaccaacatttcagctcctatgtttgactatggagacatgccg
tcccctctcagtgaaacagagcgcacgatcactgtgttgcttcgccccgccctgggcagg
ggagcacccgtcagtacgtaccaggttgtggtagaggaggagagtggcaggaaggtgaag
agggaactgggggttcaggactgttaccctctgcccatgtcccatggggaggcccaagcc
agagggacccctcactactacacggccgagctgcctcccagcagcctgcttgaagccagc
cccttcacagtgggggacaaccacacctacaatggttactggaacaccccgctggacccc
cgcaagagctacctcgtctacttccaggccatgagcaacttcagaggggaaacgagaata
aactgcatccgaatagcccggaaagcggcctgtaaggaccaccgacgggctctggaggtg
tcccaacactcagaggagatggggctgatcctgggggtgtgtgctgggggcctggtggtg
ctcatcctgctcctgggggctatcatcattgtcatcaggaaggggaagccagtgaacata
aataagacacccataacgtaccgtcaggagaagagtcacatgggttcgatggagcgcagt
ttcactgaccagagtaccctgcaggaggatgagcgcatggccctctctgcagcacgcatg
gcacacacctgcagcacgcgcagtgagcagcgtagctcagtgaacgagtccagtagtctt
ctgaggggttcgccgcgacgccagtgtgggcgtaagggctcaccctaccacactggtcag
ctccaccctgctgtgcgcgtggccgaccttctccaacacatcaaccagatgaaaactgca
gagggctacggcttcaaacaggagtatgagagcttctttgatggctgggactgcaccaaa
aagaaggacaaaactaaagggaggcatgacacgttgatgggatgtaagtcatcatggaca
tgccagccctcttgtgacgaaagcactgatcaccatgactgccacagagtcaagctccac
ccactcctgggagaccccaactctgactacatcaacgccaactacatagacggctaccat
cgatccaaccacttcatagcaactcaggggcccaaacaggagacagtgtatgacttctgg
aggatggtgtggcaggagaactgcttcagcatcgtcatgatcactaaactggtagaggta
ggcagggtgaaatgctgtaaatactggcctgatgacagtgagatgtatggagacatcaag
attacactgctgaagacggaaacactttcagagtacaccgttcgtacttttgccatggag
aggtccaactga
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