Oncorhynchus nerka (sockeye salmon): 115114315
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Entry
115114315 CDS
T07952
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115114315 (chd7)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115114315 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
Chromo_MIT1
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
115114315
NCBI-ProteinID:
XP_029498306
LinkDB
All DBs
Position
LG9b:complement(14279074..14359956)
Genome browser
AA seq
3212 aa
AA seq
DB search
MADPGMLSLFGDDANLFSDGLEGLGDCGFPQGQPNPMGQQMPHEHQGYGSLSSNSLHHPS
QAVPGQPKMGHPYDPFAGYEQQQGRMLGNGPAVNGMASPHSRYHNNPQQPGGGHHVYSGA
QGDGRGQPFPDGGAVWGPQAGPGQGLPPFQQQQAATQAPSHQQHGPSGPQGHGHQMGPYM
GRADYATMQGHSGQTQTPPRINHFPQGMGQEPSHYMGHVGLQQNPSMTGPPMRHPAQQQQ
PPQQHPQPPTQQFLHRPSQEPMASHTPRFPHSPSRQQQVLAGRPHQNMGFNMHGQAAPPG
AVTSSGQYPPYSQYGNLNQGLAGSAGMSPVMSLSSTSNNSNAMGPAQVQRYPNVGGPPQR
YTGPQVHQQPVHPNQITGQPMHPSQPMHPSQAQATPQQQPHLPTPPQGSYGSPPSMSPMR
GMGTPGGTPPPQQGRPPSVGLAPEVGGYPGVPLQPPNPMAPPQRNPTPMGAQQPHPHLQH
HTQHPSHPQQHPHMPPGQQLYPGMPPNQRLPLGQVRPPGPMAHGEPTGPQDQRLLPIQQQ
APRPGQQLQPPPMAFQQLQQVHPAQAALPPSQAQTHLAGPHHQNSPPNQPPWAPPPHQSP
PTPQKVPHIQHSPSDPSSVTTASDRTSASGASLQTAYRDQQPTDTEQKPKKKKKKKANVI
EKGGEKGGEGEKGGEGEKKQKKKKKKKKGVMEEGDEERKPDVGDSCGAEVDPLTGALEES
PAPDKKTKKKPKDKEPKEPKPPKTPKMPKTPKEPKEKKARSTTPKAKMPKKHSTKKVEAA
EGCGSSVKETKRKREPSVSVNSDVEKSPPPPSDEEDDDGVQKRRSSRQVKRKRYTEELEF
RISDEDHDGDSPAPKSPSNNSEQQEVVETEGPVVEKIMAMRMGKKEVELAEEMEVEEFYV
KFKSFSYLHCRWADLEELEKDKRIHQKVKRFRAKQALATFVTEMDDEPFNPDYVEVDRVL
DESESTDENGEPVNLYLVKWCSLPYEDSTWELKADIDLAKIEEYEAVSARQPETKRVERP
PTDGWQKSESSRDYKNDNALREYQLEGVNWLLFNWYNTRNCILADEMGLGKTIQSITFLY
EIYLKGIHGPFLVIAPLSTIPNWEREFRTWTELNVIVYHGSQASRKTIQAYEMNYRDAQG
RVIKGAYKFHAVITTFEMILTDCPELRSVPWRCVVIDEAHRLKNRNCKLLEGLKMMDMEH
KVLLTGTPLQNTVEELFSLLNFLEPERFPSENTFMQEFGDLKTEEQVQKLQAILKPMMLR
RLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGGPGGGGGAWGGGGAQV
PNLLNTMMELRKCCNHPYLINGAEEKILEDFRENHHAEMAQFHLQAMIQAAGKLVLIDKL
LPKLKAGGHRVLVFSQMVRCLDILEDYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSD
RFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRN
SYEREMFDKASLKLGLDKAVLQSMSGRENAANGVQQLSKKEVEDLLRKGAYGALMDEEDE
GSKFCEEDIDQILQRRTQTITIESEGKGSTFAKASFVAAGNRTDISLEDPDFWQKWAKKA
ELDMDAINGRNTLVIDTPRVRKQTRHYSSMKEDELAEFSELESDGENEKPLTKPRRPQDR
AQGYPRSECFRVEKNLLVYGWGRWGDILSHGRFKRPLREQDVETICRALLAYCLLHYRGD
ENIKSFIWDLITPTEDGQSRTLTNHSGLSTPVPRGRKGKKGKPAPPAPPQLPRAEWLASC
NPDLLLQEDSYKRHLKHHCNKVLLRVRMLYYLRQEVIGDQADRILEGTDSSEMDIWIPQP
FHAEVPADWWDSESDKSLLIGVFKHGYEKYNSVRADPALCFLERVGMPDAKAIAAEQRGA
DMMADGPEGEDEDPEYKPLRMPFKDEMDDFTNSPLDDKEEAMDVESGESKPGENGAGSRG
AGRLYWPAASALTARLRRLITAYQRTHKREQLRQEAMARPDGRRRRRPREQLLSMVTDGG
GAYVHEGGAFMAEGSPYMAKGGAFIPEATALLAEGGAFFKERRQRWTRREEADFYRVVST
FGVIYDTARQRFDWTQFRAFARLDKKTDESLEKYYFSFVAMCKRVCRMQVKTDTELPDPT
LIIDPITEERASRTLYRIELLRRIREQVLPHPLLGERLRLCQPSSDLPEWWDCGRHDRDL
LLGASKHGVSRTDYHILNDPALGFLEAHRKFTKGGSAGAPQPPRDGAPSTASEHAVAEKP
SHVKEEDVEGKEVKEEGDNDLPCTKAEKPDEQEGKEDEMEGEKEEKAASPKKELKDEKAK
EEGDDLKDEEDQELKEEKMEVNGDSDGESSKEAGPEKEDTPNEDVGDQDKNPEFQGKTES
SKASEDQEIKKEKEGSPAKSPKSPNPVAEKGLEEEDEEKMDEDDKSEKSSQAEVGATSEQ
KNFDEESNASLSTTARDETRDGFCPEDGEPSAIQRTFSFSFWPKDRVMINRMDNICEAVI
KGKWPANRRQFFDIPGLLPGYPGPVASESPLQRRGLAELSMVAAAQTSFSGSEDLTLSPQ
VNEDALSMSLPKQRRRRRRKVEIEAERAAKRRNLMDMVAQLRESHQPESQSQAMDLTKGM
HHHKAASSLAGYSSSSMVPSATLKAQMELLQAATPSRHRANGSLADADLPTRRRRGRRKN
VEGLELLFINNKRGATEDSEGTKASAEGVQMPPRSYRHNIPSPSASARVPSVSAMEDGDP
GTPSDKDLRDWLRQHPTYTMDMPTAYTPKSEELLLSSQFPKPKQKRHRCRNPNKIDINTL
TGEERVPVVNRRNGRKMGGAMAPPMKELPRWLLENPEFAIAPDWTDIVKQSGFLPEAMFD
RLLTGPVVREEGVRRRGRRPKSEIAKATAAAAAAQAQAASSGGLNPLLMNGLFGGMDLTS
LQGLQSFQSLQLQLMGFPGMGGADSKHASAMLPLMLPGMAGMGGLPNMFGLGGLFGNNLA
AAAASAAATPATASNGNNDEGDSDETSKRDDGEGGEEGDEDKEKDTGLEAESSEANRDAA
ALNAAAAAMAASGMSASSLAFNPFLLSTMAPGLFSPYMFLPPGLGGLTMPGFPPTTLADL
QSAMAGAMGAASGAQGQEKEPSQAGPAPDRPAASTADPETADDSDSAESLEKTAESSALE
DEASALAEEADSPQDLAAEDEEEGEDAPEKSD
NT seq
9639 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagggatgttgagcctgttcggggacgatgccaacctgttctcggacggg
ctggagggcctgggggactgtggcttcccccagggccagcccaaccccatggggcagcag
atgccccacgagcaccagggctacggttcgctctcctccaactccctccaccacccctcg
caggccgttcccggacagcccaagatgggccacccatacgaccccttcgcgggatacgag
cagcagcagggccggatgttgggcaacgggcccgccgtcaacggcatggcgtccccacat
tcgcgctaccacaacaatccccaacaacctggaggggggcaccatgtctattccggggcg
cagggtgacgggcgcggccagccattccctgacggaggagccgtgtggggcccccaggct
ggccccgggcagggactgcctccattccagcagcaacaggccgccacccaggccccctcc
caccaacaacacggcccctcagggccccagggccacggccaccagatgggcccctacatg
ggccgagccgactatgcgaccatgcagggccactctggtcagacccagacgccccctagg
atcaaccactttccccaaggtatgggccaggagcccagccactacatgggccacgtgggg
ctccagcagaaccctagcatgacaggtccccccatgcgccacccagcccagcaacagcag
cctccacagcagcacccgcaaccgcctacccagcagttcctccaccggcccagccaggaa
cccatggcctcccacacccctcgcttcccccacagcccctctcgccagcagcaggtcctt
gccgggaggccccaccagaacatggggttcaacatgcacggccaggcagccccccctggt
gctgtaaccagctcagggcaataccccccctactcccagtacggcaaccttaatcaggga
ttagccggcagtgcagggatgagtcccgtcatgagcctcagcagcaccagcaacaacagt
aacgccatggggccagcccaggtccagcgctaccccaatgtaggtggacccccacagcgc
tacacgggcccccaggtacaccagcagcctgtccaccccaaccaaatcaccggacagccc
atgcacccttcccagcccatgcacccctctcaggcccaggccaccccccaacagcagccc
cacctccccacaccgcctcagggatcctacggctctcccccctccatgtccccaatgagg
ggcatgggaacccctgggggcacacctccgcctcaacagggccgccccccgagtgtcggc
ctggctccagaggtagggggctaccctggagtcccactccagccccctaaccccatggcc
ccccctcagagaaaccccactcccatgggtgctcagcagccacacccccacctgcaacac
cacactcagcacccttcccacccgcagcagcacccccacatgcccccgggccagcagctc
taccccggcatgccccctaaccagcgactcccactcggccaggtgagacctccaggtccc
atggcccacggtgagccgaccggaccccaggatcagcggctgctccctatccagcaacag
gctcccagacctgggcagcagctgcagcctcctcccatggccttccagcagctgcagcag
gtgcaccccgcccaggctgctttgcccccgtcgcaggcccagacgcacctggccggcccc
caccaccagaactctccacccaaccagccaccctgggcgccaccgccacaccagtcgcct
ccaaccccccagaaagtgcctcacattcagcattccccttcagatccatcatccgtgacg
acagcttccgacaggacatccgcctcgggggcgagcctccagacagcctaccgtgaccag
cagcccacggacacagagcagaagccaaaaaagaagaagaagaagaaagccaatgtgatt
gagaagggtggggagaagggtggagagggggagaagggcggagagggggagaagaagcag
aagaagaagaagaagaagaagaaaggagttatggaggaaggtgatgaggagaggaagcca
gacgtcggggacagctgcggggctgaggttgaccctctgacaggcgccctggaggaatcg
ccggcgccggataagaagaccaagaagaaaccaaaggacaaggagcctaaagaacccaag
ccacccaagacaccgaaaatgcccaagacccccaaagagcccaaggagaagaaggccagg
agcaccacccctaaggccaagatgcccaagaagcacagcactaagaaggtggaggcagca
gagggctgtggcagcagtgtgaaggagaccaagaggaagagagaaccctcagtgtcggtc
aactcagatgtggagaagtcacccccacctccctctgatgaggaggatgacgacggtgtc
cagaagcggcgctccagtcgtcaggtgaagagaaagcgctacaccgaggaactcgaattc
aggatctcggatgaggaccatgatggagactccccggctcccaagtccccctccaacaac
tctgaacaacaggaggtggtggagacagaggggcctgtggtggagaagatcatggccatg
cgcatggggaagaaagaggtggaattggcagaggaaatggaagtggaagaattctatgtg
aagttcaagagtttctcctacctgcactgtcgctgggcagatctggaggagctggagaag
gacaaaaggatccaccagaaggtcaagcggttcagggccaagcaggccctcgccaccttc
gtaacagagatggatgacgagcctttcaacccggactatgttgaggtggaccgggtcctg
gacgagtcggagagcacagatgagaacggcgagcctgtcaacctgtacctggtgaagtgg
tgctccctgccctatgaggacagcacgtgggagctgaaggccgacatcgacctggccaag
atcgaggagtacgaggccgtctcggcccgccagcccgagacaaagcgcgtggagcgacct
cccactgacggctggcagaaatccgagagttccagggattataaaaacgacaacgcactc
agggaataccagctggagggagtgaactggctgctcttcaactggtacaatacacggaac
tgcatcctagcagatgaaatgggcctgggcaagaccatccagtcaatcacattcctctat
gagatctacctgaaggggatccacgggcccttcctggtcatcgcccccctctccaccatt
ccaaactgggagagggagttccgcacctggaccgaactaaacgtgatcgtctaccatggc
agccaggccagccgcaagaccatccaggcctacgagatgaactaccgtgacgcgcagggt
cgtgtgataaagggagcgtacaaatttcatgcagtcatcaccacgtttgagatgatcctg
acggactgcccggagctgcgcagcgtcccgtggcgctgtgtggtcatcgacgaagctcac
cgcctcaaaaacaggaactgcaaactgctcgagggactcaagatgatggatatggagcac
aaggtgctgctgaccggaacgcccttgcagaacactgtggaggagctcttcagtctgctc
aacttcctggagcctgaacgcttcccctcagagaacaccttcatgcaggagtttggcgac
ctcaagactgaggagcaggtccagaagctgcaggccatcctgaagcccatgatgctgcga
cgtctcaaggaggatgtggagaagaacctggcccccaaggaggagactatcatcgaggtg
gagctgaccaacatccagaagaagtactaccgggccatcctggagaagaacttctccttt
ctgtctaaaggaggaccgggaggtggtggtggtgcatggggaggcggaggggctcaggtc
cccaacctgctcaacaccatgatggagctgaggaagtgctgcaaccacccctacctcatc
aatggtgcagaggagaagatcctggaggacttccgcgagaaccaccacgccgagatggcc
cagttccacctgcaggccatgatccaggcggcgggcaagctggtgctgatcgacaagctg
ctgcccaagctgaaggccggaggacacagggtcctcgtcttctcccagatggtgcgctgc
ctggacatcttggaggactacctcatccagaaacggtacccgtacgagcgtatcgatggc
cgcgtaaggggtaacctccggcaggctgcgatcgaccgcttctctcgaccggactccgac
cgctttgtcttcctgctgtgtacccgggccgggggcctgggcatcaacctgactgctgca
gacacctgcatcatctttgactcggactggaacccccagaatgacttacaggcccaagcc
agatgccacaggattggccagagcaaggcggtgaagatctacagactgatcactaggaac
tcctatgagagggagatgtttgacaaggccagcctcaagctgggccttgacaaggctgtg
ctgcaatccatgagtggccgagagaacgcagccaacggggtgcagcagctgtctaagaag
gaagtggaggacctcctccgcaaaggagcttacggagctctgatggacgaggaggacgag
ggctcgaagttttgcgaggaagacattgaccagatcctccagagacgaacccagaccatc
accattgagtctgagggcaagggttccaccttcgccaaggcgagcttcgtggccgctggg
aacaggacggacatttccctggaggacccagacttctggcagaagtgggccaagaaggcg
gagctcgacatggatgctatcaatggacggaacaccctggtgattgacacgccgagggta
cggaagcagacacgccactacagctcaatgaaggaggacgagttggcagagttctccgag
ctggagagtgacggcgagaacgagaagcccttgactaaacccaggcggccacaggaccga
gcccaagggtacccccgcagcgagtgctttagggtggagaagaacctcctggtttatggg
tggggtcgctggggagacatcctgtcccacgggcgtttcaagcggcccctgcgggagcaa
gatgtggagaccatctgccgcgccctgctggcctactgcctgctgcactaccgtggcgac
gagaacatcaagagcttcatctgggacctcatcacgcccaccgaggacggacagagccgc
acgctcactaaccattccggtctgtctactccagtaccacggggtcgtaagggcaagaaa
gggaaaccagccccgcctgcccctccccagctccccagggcagagtggctggccagctgt
aaccctgacctgctactgcaggaggacagctacaaaagacacctcaaacaccactgtaat
aaagttctcctgagggtccgtatgctctactatctgcgacaggaagtcatcggtgaccaa
gccgaccggatcctagagggaacagactcaagtgaaatggatatctggatccctcagcct
ttccacgccgaggtccctgccgattggtgggacagcgagtcggacaaatcgctcctcatc
ggcgtcttcaaacacggctatgagaagtataactctgtgcgcgccgaccctgcactgtgt
ttcttggagcgggtgggcatgcctgacgccaaggccatcgctgcagagcagaggggggcg
gacatgatggcagatggtccggagggagaggatgaggacccagagtacaagcctctccgc
atgccctttaaagatgagatggatgacttcactaactctccccttgatgacaaagaggaa
gctatggacgttgagagtggtgaatctaaaccaggtgagaatggagcaggcagcagaggg
gcgggtcgtctgtactggccggcagcttcggccctcaccgctagactccgccgcctcatc
actgcctaccagcggacgcacaaacgtgagcagctccgccaggaggccatggcccggccc
gacggccgccgccgccggcggccccgagaacagctactctccatggtcacagatggtgga
ggggcctacgtgcatgagggcggagccttcatggcagagggcagtccttatatggccaag
ggcggagcgttcattcccgaggcaacggctctcctggcggaaggaggggccttcttcaaa
gagaggcgtcaaaggtggaccaggcgtgaggaagctgacttttaccgcgtggtgtccacg
tttggcgtgatctatgacacggcccgtcagcgctttgactggacccagttcagggccttc
gcgcgtctggacaagaagactgacgagagcctagagaaatactacttctccttcgtggcc
atgtgcaaacgggtgtgtcgcatgcaggtcaagaccgacacagagctcccagaccccacc
ctgatcattgaccccatcacggaggagcgggcatcacgcaccctttaccgcatcgagctg
ctgcgccgcatccgcgagcaggtgttgccccaccccctgctgggcgagcgcttgcgcctc
tgccagcccagctctgacctgccggagtggtgggactgcggcaggcacgaccgcgacctc
ctcctgggtgcctccaagcacggcgtgagccgcaccgactaccacatcctcaacgaccca
gccttgggcttccttgaggcccacaggaagttcaccaaggggggatcggctggggcgcct
cagccgccccgcgatggagctccctctactgcctctgagcatgctgttgctgagaaaccc
tctcatgtcaaagaggaggatgtggaaggcaaggaggtgaaagaggaaggtgacaacgac
cttccatgtactaaagctgagaaaccagacgagcaggaaggcaaggaagacgagatggag
ggagagaaggaagagaaggctgcgtctcccaagaaggagttgaaggacgagaaagctaag
gaggagggagatgacctaaaagacgaggaagaccaagaactgaaggaggagaaaatggag
gtcaacggtgattctgacggagagtcttccaaggaggccggacctgagaaagaagacact
cccaatgaggacgtcggggaccaggacaagaatccagaattccaggggaaaacggagtct
tccaaagcatcggaagaccaggaaatcaagaaggagaaagaagggagtccagccaagtct
cccaaatctcccaatccagtggctgagaaaggcctcgaagaggaggatgaggagaagatg
gatgaagacgacaagtctgagaagtcgtctcaagctgaagttggtgccacctctgagcag
aagaactttgacgaggagagcaatgcctcactgagcaccacggccagagacgagactcgc
gatgggttctgccccgaggatggagaaccctcagccatccagagaaccttctccttctct
ttctggccgaaggatcgcgtaatgatcaaccgcatggacaacatctgcgaggcggtcatc
aagggcaagtggcccgcaaaccgtcgtcagttcttcgacatcccgggcctgttgcctgga
taccctggccccgtggcgtcagaaagccccctgcagaggcggggcctggccgagctgtca
atggtggcggctgctcagacgagcttcagcggcagcgaggacctcaccctctcgccacag
gttaacgaggatgctctgagcatgtcgttgccaaagcagcgtcgccgcaggcggaggaag
gtggagattgaggcggagcgtgccgccaaacgaaggaacctgatggatatggtggctcag
ctcagagagtctcaccaacctgagtcccagagccaggccatggacctcaccaagggcatg
catcaccacaaggcagcgtcgtccctggcgggctactccagcagcagcatggtgccttct
gctaccctcaaggctcagatggagctgctacaggcggccacgccttccagacatagggcc
aatggctcattggccgatgctgacctgcccacccggaggagacgaggccgcaggaaaaat
gtggaggggctagagctgctgtttatcaacaacaagagaggagccacggaggattccgag
gggaccaaagcgtcagcggagggggtgcagatgcccccgcgttcctaccgccacaacatt
cccagtcccagcgcctccgcccgcgtcccctctgtcagcgctatggaggacggggaccca
ggtaccccctctgacaaggacctgagggactggctcagacagcaccccacgtacacaatg
gacatgcctactgcatacacaccaaagagtgaggaattgctcctctcctcccagttcccc
aaacccaagcagaagcggcaccgctgccgaaaccccaacaagatcgacatcaacactctc
accggagaagagagggttcccgtggtcaaccggagaaacggcagaaagatgggtggagcc
atggcgccgcccatgaaggaactgccccgatggctcctggagaacccagagtttgccatc
gctcctgactggaccgacattgtcaagcaatcgggcttcctccctgaggccatgttcgac
cgtctcctgactgggcccgtggtgcgcgaggagggcgtccgtcgtcgggggagacgcccc
aaatcggagatcgccaaagcgacagcggctgctgcggcagctcaggcccaggctgcatca
tccgggggcctaaaccctctgctgatgaatggcctgtttggaggcatggacctcaccagc
ctgcagggcctacagagcttccagagtcttcagctgcagctcatgggcttccccggcatg
gggggggctgactctaaacacgcctcagccatgctgcctctcatgcttcctggtatggct
ggtatgggcggcctgccaaacatgtttggcctgggaggcctgttcggaaataacctggcc
gccgcagctgcctcggctgctgccacgcccgctacagcctccaacggcaacaatgacgag
ggtgattcggacgagacgtcaaagagagatgacggggagggcggagaagagggggatgag
gacaaggagaaggacactggattggaggcggagtcgagtgaggctaacagggacgccgcg
gctctgaacgcagccgctgccgcaatggccgcctccggcatgtcggccagctcccttgcc
ttcaaccccttcctgctgtccaccatggcccctgggctcttttccccctacatgttcctg
ccccctggcctgggaggtctcactatgcctggctttccccccaccaccctggctgacctg
cagagtgccatggctggagccatgggggctgcttctggagctcagggccaggagaaggag
cccagccaggctggccccgccccggaccgccctgccgcatctaccgcagacccagagaca
gccgacgacagtgactcagcagagagcctggagaagactgccgagtcgtctgccctagaa
gacgaggcctccgcattggctgaggaagctgactcgccgcaagacctagcggctgaggat
gaggaggaaggagaggatgcccctgagaagagtgactga
DBGET
integrated database retrieval system
