Oncorhynchus nerka (sockeye salmon): 115114320
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Entry
115114320 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115114320
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115114320
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
Motif
Other DBs
NCBI-GeneID:
115114320
NCBI-ProteinID:
XP_029498317
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Position
LG3:28606..32697
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AA seq
683 aa
AA seq
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MSAILFLFLPYATSLVTFGDVFSLLVKLHECVIYTFLLCNLVNVCVCVFPCPVIKTGESG
MTVFRLLTKLTGWVWVQGNARLVYKNGQPECIIASQRVLTDEEGEDNLRKRSLQLTFSYT
TGEALLYNTSFPKTLVTGDSLAGDTTGPAGNITNNNQDGTLDPDSLLGSLLKQDKSIYCC
SPHTQNELQLPLQLQEEVAGVPQEEVAGLPQGDCGGIFSSSWQEGSIRSLSESVLFKQEP
LGVGGGGGIDGFSSEDRDRDRDLWSFMMNLGISREDLELFQQDEMFLDVDLDTGRDRLLP
DLTDEILSYVQESLRKRSDWGQTVLSCRGAKLGEQDYSSPTMLLHQPSMEQSQTPHLHST
TVLLHQPSTSQPHSSTVPQCQSQIQPPQLPVVHPLSVHHYRPPPHYPQQPIPQQCLHTQP
HPQATQQQKQSRLNGQVLPNQQQQQLCNRLKHMQVTGTGSITQRQKDITKQQQQIPPLFN
VEQPGGLQTRHGHPQQGHLCLGEASLGLPYRNQLNTLSVSRSSVLSSYVPTTGLQSQGVD
GDLMPQNLEEFLGSLESSGPRGTEDGRGALQWSVVEALGVFQQQRHLPDDLAQSQATSQG
CAQHAYPLAMGLSQVNRAEWPFTTQFQNGSLKEAGPAPGPVPNPGSSRGADHGHAAAKLP
IHQPPPPSAESTPYPDLPLSGFM
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccattttgtttttgtttttaccatatgccacatccctagtgacttttggggat
gtttttagtttattagttaaactgcatgaatgtgtcatatacacatttctgctgtgtaac
ttggttaatgtgtgtgtttgtgtgtttccatgcccagtgataaagaccggagagagtggg
atgacagtattcaggctgctgaccaagctgacaggctgggtgtgggtgcagggtaacgcc
agactggtctacaagaacggacagcctgagtgtatcatcgcatcccaaagagtcctcact
gatgaagagggagaggacaacctaaggaagcggagcctccagctgactttcagttacacc
actggggaggctcttctctacaacaccagcttccccaagactctggtaacaggggactcc
ttagcaggcgacaccaccggccctgcaggaaatatcaccaacaacaaccaggatggaacc
ctagaccctgactcactgctgggctctctgctgaaacaggataagtccatctactgctgc
tcccctcacactcagaacgagctccaactccctctccaactccaggaggaggtggcaggg
gttccacaggaggaggtggcagggcttccacagggggattgtgggggcatcttctccagc
agctggcaggagggcagcatccgctctctgtcggagagtgtcctcttcaagcaggagccg
ttgggggttgggggtggcggggggatcgacggcttctcatcggaggacagagacagagac
agggatttgtggagcttcatgatgaacctgggcatcagtagggaggacctggagctgttc
cagcaggatgagatgttcctcgatgtggatctggacactggccgagaccgcctccttcct
gacctgacagacgagattctctcctacgtacaggagtctctgaggaagaggtcggactgg
ggtcagactgtattatcttgcaggggggctaagttaggggaacaggactatagcagccct
accatgctgttacaccaaccatctatggaacaatcacaaaccccacatctacattctact
acagttctgttacaccaaccatcaacctcacaaccacattcttctacagtacctcagtgt
cagtcacagatacagccaccacagctgcctgtagtccatcccctatcagttcaccactat
cggcctccgccccactacccacagcagccaataccgcagcagtgtttacacacacagccc
cacccacaggcaacacagcagcagaaacagagccgtctaaatggacaggtattgccaaac
caacagcagcagcagctgtgtaacagactgaagcacatgcaggtgactgggacgggttca
ataacacaaagacagaaagacatcaccaagcagcagcagcagattcctccattgttcaat
gtggagcagccaggggggctccagactcgccacggccacccccagcaagggcacctctgc
ctgggggaagcttccctgggcctcccctacaggaaccagctgaacactttgtctgttagc
cgctcttcagtgctctcctcctatgtacccaccacgggcctccagagccagggggtggac
ggagacctcatgccccagaatttggaggagttcctgggcagcctggagtccagtggtccc
cgagggacagaggatggtaggggagcgctccagtggagtgtggtggaggccctgggtgtg
ttccagcagcagaggcacctccctgacgacctggctcagtctcaggccaccagccagggc
tgcgctcagcatgcctatcccctggctatggggctcagccaggtcaatagagcagagtgg
ccattcaccacacagttccagaacgggagcctgaaggaggctggtccagcccctggccct
gtacccaaccctgggtcctccaggggggcagaccatggacatgcagcagcgaagctgcca
attcaccagcctcctcctccctctgctgagagcacgccctaccctgacctccctctgagt
ggatttatgtga
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