Oncorhynchus nerka (sockeye salmon): 115114326
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Entry
115114326 CDS
T07952
Name
(RefSeq) eukaryotic translation initiation factor 4 gamma 1-like isoform X1
KO
K03260
translation initiation factor 4G
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115114326
03012 Translation factors [BR:
one03012
]
115114326
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115114326
mRNA cycle factors
Stress granule specific factors
115114326
Translation factors [BR:
one03012
]
Eukaryotic type
Initiation factors
eIF-4
115114326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
W2
eIF4G1-like_eIF4E-bd
Motif
Other DBs
NCBI-GeneID:
115114326
NCBI-ProteinID:
XP_029498323
LinkDB
All DBs
Position
LG9b:14646655..14673612
Genome browser
AA seq
1789 aa
AA seq
DB search
MKALLLSVHLQDRLASQRHPNAEPSEMNKPPQPITGPTSVPHPSPSPGLTQAAYAPGQPP
SLVFATPPPQQMNSSPQPRQFAAGPRALHQQGGYRALQPYYANRATMSTSAPRVQTSSGP
RPVGPTHVYQPSSQMMMIPGQQLSFAGSPQGYFIPPGQYRAPYMPPSPQYPVTSGTAGFY
PGTSPAEYPTYAGAYYPAQPQYSHTPPVQTAPVMISPAQPQQQALPPQPPPSQPLAPKRE
RKAIRIRDPNQGGRDITEEIMSGGRATSTPPSQSSTTEGEGPSQTNGEVTKPVTMMTRTD
DNTEPAETMVAMTPPPALVTPEPATATASTEAKQEKDSQAAPPTEQVVSQSAVPTAAGKA
EEAIPPEEDQAPPPSPSPPAAPTSPPPAEVQTSPPITTIAQVSDTVDAGVTLAGKAVTPE
APPIEEEPSAALAAVEKPPALVAEKEEAENKKEEEVVVVEEEIVEKVKEEPVLTTKPEVV
APVTVAVAKEHTKPAPRPLTPVATATIKHSAPAVKPVVSVEAPTKTESVVEPTAPKQETA
AAVPVSAPVPAVTPSVPEAEPAMAQKSEAQTPLSNGLPQEYPDEVDSPVPAQERTAMPNT
EPAVPTPQETATLADAAVAEEGEKEEDAATVPLASSPSEDTSMQAAVSVPKKKRNMKELN
KKEAIGDMLDAFKEEKEAAAAPEPLSTLAEPSPVAPLPLVTADAPDETWEEKEDKQNADT
PPLKPGDLKYQYKGEQWKPIDPEDKKRYDREFLLGFRYIGASMNKPEGLPLICDVVLDKA
NKTPMRPAEPGRNMMNAGPDFTPAFMGNLGRQSSGGGGGGPRGPGRDHMGPPGPRRSQQG
QRKEPRKIIISSSLGGDVELNKAEKAWKPAMKMAGSRGTGPEEEESDDPEQAKTQELFKR
VRSILNKLTPQMFQQLMKQVTELTIDTEERLKGVIDLIFEKAISEPNFSVAYANMCRCLM
GLKVPTTDKPGVTVNFRKLLLNRCQKEFEKDQDDDVIFEAKQKEMEAAKEEEKAGLKAEL
EEAKDKARRRSLGNIKFIGELFKLKMLTEAIMHDCIVKLLKNHDEESLECLCRLLSTIGK
DLDFEKAKPRMDQYFAQMDKIIKEKKTSSRIRFMLQDVIDLRRSGWVPRRGEQGPKTIDQ
IHKDAEREEQMQLVKVQQQLMSRNDSGGGGGGGGGGRGGGGGGGRDGRGGDRDRGGRDQG
GRGGQHGGQGARGSQPQDEGWNTVPISTKNRPIDTSRLSKITKPGALDFNNQLLAPQLGG
KGMWGSWGKGSSGGTTGAKPAAGAEPAAETGRPATGNRFSALQQSAPPASSSDADRRVPQ
RSSSSRDRGGDRDRFDRFERRDSSRDARPPVTKRSFSRETEERRSDSRTPTEPPVRRVAS
MSDDRNRGSRDRGGSGSRDRAPSKEAVVKRETGPTLPPAAPAKPAMTEEELDKKSSAIIE
EYLHLNDMKEALQCVGELNSAPLLFVFVRNGLEDTLERSAIARERMGLLLHQLLKAGTLP
TTQYYKGLQEILEVAEDMAIDIPHIWQYLAELITPMLHDGGIPMGQLFREISKPLVPLGK
AGLLLVQILNLLCKGMTHKKVGGLWTEAGLNWRDFLPEDEDVNKFVTEQKIEFTLGEESD
ETNQKKPMSGEELSKHLDRLIQDRANNQRIRDWVEANLDEQQAAANQFVRALMTSICQSA
VICENPYKVDVEQITQRAKLLQRYLSDEHRELQALYALQALMVHMEQPANLLRMFFDALY
DEDVIKEEAFYRWESSKDPAEQTGKGVALKSVTAFFTWLREAEEESDKD
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctgctcttgtcagtccatttacaagatcggctggcaagtcagcgccaccct
aatgcagaaccaagtgaaatgaacaaaccaccgcagcctataacgggacccacctctgtc
ccacacccctccccctcccctggactgacacaggctgcctatgccccaggtcagccccct
tctctcgtctttgccaccccaccacctcaacaaatgaactcttcaccgcaaccgcgacag
ttcgccgcagggcctcgtgctttacaccaacagggcggatacagggcactgcagccctac
tatgccaacagggccaccatgtccaccagtgccccccgggtccagaccagcagcgggcct
cgtccggtgggtcccacccatgtctaccagcccagctcccagatgatgatgatccctggg
cagcagctgtcctttgctggctcccctcagggctacttcatcccccctggacagtaccgg
gctccctacatgccacccagtccacaataccccgtgaccagtggcacagcaggcttctac
ccaggaaccagcccggctgaataccccacctatgcaggtgcctactacccggcccagccc
cagtacagccacacaccccctgtccaaaccgcgcctgtcatgataagccccgcccagccc
cagcaacaggccctgccccctcagccgccgccgagccaaccactggcacccaagagggag
cgcaaagcgatcagaatacgagaccccaaccaggggggccgcgatatcacagaggaaatc
atgtccgggggaagggccacctccacccccccatcacagtcctccactacagagggagaa
ggtccttcccagaccaacggagaagttacaaagcccgtcaccatgatgacgagaacagat
gacaacacggaacctgcagaaacaatggtcgccatgaccccgcctcctgcgttggtgacc
ccagagcctgccaccgccaccgcctcaactgaggccaagcaggaaaaagatagccaggca
gccccacctaccgaacaggtcgtcagccaatcggctgtccccacggctgcggggaaggcc
gaggaggccattccgccagaggaagaccaggcccctcccccatccccctcgcccccggca
gctcctacctcccctccccctgcagaggtgcagacatcaccccccatcaccaccatcgct
caggtcagtgacacggtggatgccggtgtgaccctggcgggaaaggcagtgactcctgaa
gctcctcccattgaggaagagccttcggccgccctagcagccgtcgagaagcctcctgct
ctggtagcggagaaagaggaggcagagaataaaaaggaagaagaagtagtggtggtggag
gaggagattgtagagaaggtaaaggaggagcctgtgcttaccaccaagccagaggtagtg
gcgcctgttacggtggcggtcgctaaagaacacactaagcccgctccacgacctttgact
cccgttgccacagcaacgatcaaacactctgccccggccgtgaagccggtggtgtctgtg
gaagctcccactaaaactgagagcgtggtcgagccgacagcgccgaaacaggaaactgct
gctgctgtgcccgtgtctgcccccgttcctgccgtcaccccctctgtcccggaggcagag
cccgccatggcccagaagagcgaggcgcagacgcccctgtccaacggcctcccccaggag
taccccgacgaggtagactcccccgtgcccgcacaagagcgaactgcaatgcccaacacc
gagcctgccgttcccacacctcaggaaactgctacccttgcagatgctgccgtggcagag
gagggggagaaagaggaagatgcagccacggtgcccttggccagtagcccttcagaggac
acgtctatgcaagctgctgtgtctgtgccaaagaagaagaggaacatgaaggagctgaac
aagaaggaggccataggagacatgctggatgccttcaaagaggagaaggaggcggcggct
gcccccgagcccttgtccactctggcggagcccagccctgtggcccctctccctttggtg
acagccgacgcgccagacgagacgtgggaggagaaggaggacaagcagaacgccgacacg
cccccgctcaaaccaggcgacctcaagtaccagtacaaaggagagcaatggaagcctatc
gacccggaggataagaagaggtacgacagggagttcctgctgggcttccggtacattggt
gccagcatgaacaagcccgagggcctgcctcttatctgcgatgtggtgttggataaggcc
aataagacccccatgcgcccagcggagccgggtcgcaacatgatgaacgccgggccagac
ttcacccccgccttcatgggtaacctgggcagacagtcctccggaggtgggggaggggga
ccacggggccctggaagggaccatatgggacccccaggaccccggcgctcccagcagggc
cagcgcaaggagccccgcaagatcatcatctcctcatcgctaggcggcgacgtggagctc
aacaaggcagagaaagcctggaagcccgcgatgaagatggcggggagccgcgggaccggc
cccgaggaggaggagagcgacgaccccgagcaggccaagacccaggagctgttcaagagg
gtccgctccatcctcaacaagctgacccctcagatgttccagcaactgatgaaacaggtc
accgagctgaccatcgacacggaggagcggctgaagggagtgatcgacctgatctttgag
aaggccatctccgagcccaacttctccgtggcctacgccaacatgtgccgctgccttatg
gggttgaaagtgcccaccacagacaagccgggagtgactgtgaacttccgtaagctgctg
ctgaaccgctgtcagaaggagtttgagaaggaccaggacgacgacgtgatctttgaggcc
aaacagaaggagatggaggccgcaaaagaggaggagaaagccggtctgaaggcggagctg
gaggaggcgaaggacaaggcgcgccggcggtcgctgggcaacatcaagttcatcggcgag
ctgttcaagctgaagatgctgacggaggccatcatgcacgactgcatcgtcaagctgctg
aagaaccacgacgaggagtcgctggagtgcctctgtagactgctgtccaccatcggcaag
gacctggactttgagaaggccaagccccgtatggaccagtactttgcccagatggacaag
atcatcaaggagaagaagacctcgtccaggatccgcttcatgctgcaggacgtcatcgac
ctcagacggagtggctgggtgccccggcgaggggaacaaggcccgaagaccatagaccag
atccacaaggacgctgagcgagaggagcaaatgcagctggtcaaggtccaacagcagctt
atgtcaaggaatgacagtggtggtggaggaggaggaggtggtggtggaagaggaggaggt
ggtggtggaggaagagacggcagggggggagaccgagacagaggaggaagggatcagggg
ggccgtgggggccagcacggcggccagggggctaggggcagccagccccaggacgaaggc
tggaacacagtgcccatctccaccaagaacagacccatcgataccagccggctcagcaag
atcaccaagcctggtgctctggacttcaacaaccagctccttgcgccccagctcgggggt
aagggcatgtggggcagctggggcaagggcagcagtggaggcaccacgggagccaagcct
gctgccggagctgaaccggcagcggagactggccgtccggccactggcaaccgtttctct
gccttgcagcagtctgctccaccagcgtcgtcctcggacgctgaccgcagggtaccccag
aggtccagctccagtcgtgaccgcggcggggaccgggacaggttcgaccgcttcgagcgg
cgcgacagtagtcgcgacgcccgcccgcctgtcaccaagcgcagcttcagccgcgagaca
gaggagcgtaggagcgatagtcgtacccctacggaaccccccgtccggcgcgtagccagc
atgtctgacgaccggaacagaggcagccgtgaccggggaggcagtggtagccgggacagg
gctcctagcaaggaggctgttgtgaagcgtgagacaggccccacccttccccccgctgct
ccggccaaaccggccatgaccgaggaggagctggacaagaagtccagcgccatcatcgag
gagtatctccatctcaacgatatgaaggaggcgctgcagtgtgtaggggagctgaacagc
gccccgctgctctttgtgtttgtgcggaacggcctggaggacactctggagcgcagcgcc
atcgccagggaacggatgggcctgctactgcaccaactcctcaaggccggcaccctgccc
acaacacagtactacaaggggctccaggagatcctggaggtggctgaggatatggccata
gacatcccccacatctggcaatacctggctgagctcatcacccccatgctccatgacgga
ggcatccccatgggacagctcttcagggagatctccaagcccctggttcccctgggtaag
gctggtctgctgctggtgcagattctcaacttactctgcaaaggaatgacccataagaag
gtgggtggtctgtggacggaagcagggctcaactggagagacttcttgccagaggatgag
gacgtcaataagtttgtgactgaacagaaaattgagtttaccctgggggaggagtcagat
gagaccaatcagaagaagcccatgagcggggaggagcttagcaaacatctggacagactg
atccaggacagggctaacaaccagcgcatcagagactgggtcgaggccaacctggacgaa
cagcaggcggctgccaaccagtttgtgcgcgctctgatgacctccatttgccagtcagct
gttatatgtgagaacccgtacaaggtggacgtggagcagattacccagagggccaagctg
ctgcagcggtacctgagtgacgagcatagggagctgcaggccctttacgccctccaggcc
ctcatggtgcacatggagcaaccggccaatctgctgcggatgttctttgacgcgctgtac
gacgaggacgtgatcaaagaggaggccttctacaggtgggagtccagcaaagaccccgca
gagcagaccggcaagggcgtggcccttaagtcggtcaccgctttcttcacctggctccgc
gaggccgaagaggagtccgacaaggactaa
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integrated database retrieval system
