Oncorhynchus nerka (sockeye salmon): 115114334
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Entry
115114334 CDS
T07952
Name
(RefSeq) GRB10-interacting GYF protein 2-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115114334
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115114334
Surveillance factors
Other surveillance factors
115114334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
115114334
NCBI-ProteinID:
XP_029498340
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All DBs
Position
LG9b:complement(14915535..14949567)
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AA seq
1423 aa
AA seq
DB search
MAETQTLNFGPEWLRALSGGGHGGGSSSSVATSPPLSPALPKYKLADYRYGREEMLALYV
KDREIPVDLHDKDFLPILQEEPLPPLALVAFTEEEQRNFSMSVNSAAVLRLMGRGGGPVG
PGAPRGRSTSRGRGRGRGDGGFYQRSFDDVEGGFGRGGREMHRSQSWEESHAESIFSPSR
GDRRFEKPGRKESEVAPAHFPMNHIRANYEDVGTGVGGLPVRKHDFTRSESENWRTSRDE
ANGEDGDEGGWRLAGASRRDSDRWCPPSPDGLRSAVRREVHPGEQPRQRRFPFDAREDER
GYRRPRSGSGSLEEDGSSLPEWCLEDAEEETGTFDSSGAFLSLKVRKAPKEPILEEAELD
FRPLEECDEGLEEDGQPRETKNPDREARRDPDRKQDVGRGVVEAPPAPSPPEPQPSAPLL
PPSQPDRAEEPERPLERPPAPEHRPEANKVPLNVPMSMPMSNTMLDSLPIPHTAAHTLTV
SPVSAPSSTIQMQQKPPDVPVAMPIPLPFSTSLMAQSTSIMTPNIMAPSTGLMAPIGRPT
VMPPHHTMVEDERLKHFEQEAEKMVAYLQDSNDRLAAKNSAPEPAGLPLTHEAALKWFYK
DPQGEMQGPFSNPEMTEWFQAGYFTMTLLVKRGCDEVFQPLGEIIKMWGRVPFAPGPAPP
PLLGDAGDQERLKLQQELTALNLYQLQQLQYQYLLRQQYAQALAQQKAQALSSAPHQQQQ
QQQQQINLLLQQYQALKMRSAEHTTSESLLTPVTRSMSVPDSQGSVWEMQHPSSQVSCTP
NIQQPAPSAWEGSSVWDLPIDSMAQAPTIEQMQQLEKNKAAKVSPPHLLEMERREAELRA
KREEEEKERKRLEEALRSRQEAERKRLEEELSRHKQEEELRQREQEEAQRRQKEEEERQA
QEEALRRLEERRREEEERQQREEFLRKQEEEHRKQEEERREEERRKQEEERRKQEEERRK
QEELEALRRCEEEKRLEEEAVAAAMALARQQQEEAKRREQEAARQQELARQRQQQQEALR
RLQQQQQQQQLAQMKLPSSSKWGQQSAVTAAAISQSQNALSLSEIQKVEEERERQAREEQ
RRQQAELLKLQQQQALQEALQPQAKLSGWGSVAKQPAATKSLLEIQREEAQQVKQRKEQG
GGSQQPSHPTVTQSNRAQNRATTALSSSVWGSVATSSMGGGAPNWGGESSSIWGDSTNSN
MGFWDETAQPPPQAPPPARKPNAQKNNKANANLSSRANKKVVEEEEKLLKLFQGVNKSQQ
DGFMQWCEQTLHTLNTANNLDVPTFASFLKEVDSPYEVHDYVRAYLGDTSEAKEFAKQFL
ERRAKQKANQQKEPQAPQNQQPTLKQRQQQQDSVWGVSGTGSPSRYQSNHTSLQQQARFE
TVTSGKKKKKQKMVRADPSLLGFSVNAASERLNMGEIETVEDF
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaactcagacactcaacttcggaccagaatggctccgggccctgtctgggggt
ggccatgggggtggtagcagcagtagcgttgccacctcaccaccactctctcctgcattg
ccaaagtataaacttgcggactaccgctacgggagagaagaaatgctagcactttatgtc
aaggatagggagatccctgtagacttacatgataaggattttctgcccattttacaagag
gagcccctgccaccgctggcacttgtagcttttacagaggaagagcagagaaatttctcc
atgtctgtaaacagtgcagcagtgctcaggctgatgggaagaggaggaggcccggtgggg
ccaggggcaccgaggggtcgaagcacttcacggggaagaggacggggtagaggagatgga
gggttttaccaaagaagttttgatgacgtggagggaggctttggccgcggaggcagggag
atgcaccgctcccagagctgggaggagagtcacgctgagtctattttctccccatctagg
ggagacagaaggtttgaaaagccaggtcgaaaagagtcagaagttgctcctgcccacttt
ccgatgaatcatatccgtgctaactacgaggatgttgggaccggcgtgggaggcctgcct
gtgaggaagcacgattttacacgttcggagagcgagaactggcgcacgtcccgcgacgaa
gcaaatggtgaggacggtgacgaggggggctggcgcctggcgggtgcctcgcgacgcgac
agtgaccggtggtgccccccgagtccagacgggctgcggtcggcagtgcggcgagaggtg
cacccgggggagcagccacggcagcgccggttcccgttcgacgccagagaggacgagcgc
ggctacaggcgtccccggtcaggcagtggcagcctggaggaggatgggagcagcctgcca
gagtggtgcttggaggacgctgaggaggagacgggcaccttcgattcgtccggagccttc
ctctcgctcaaggttcgaaaagctcccaaggagcccatcctggaggaggcagagctggac
ttcagacccctggaggagtgtgacgagggccttgaggaggacggacagccccgagagacc
aaaaacccagacagagaggcaagaagagaccccgacagaaaacaggatgtggggagaggg
gtagtagaggcgccgcctgctccctcgcctccagaaccccagccctccgcccctctgctg
ccccccagccagcctgacagagcagaggagcctgagaggccacttgagcgacccccagcc
ccggaacacaggccagaggccaacaaagtccccctgaatgtccccatgtcgatgcccatg
tccaacacaatgctggactccctccccatcccccacaccgcagcacacactctcacagtg
tctccagtgtcggccccgtcgtccaccatacagatgcagcagaagcccccggacgtgccc
gtggctatgcccatcccgctgcccttcagcaccagcctcatggctcagagcacgtctatc
atgacccccaacattatggcccctagcacgggcctcatggctcctattggaaggcccacg
gtcatgccgccacaccacaccatggttgaagatgagagactgaagcactttgaacaggaa
gcagagaagatggtggcgtatctacaggacagtaacgaccggctggctgccaagaactca
gcacccgaaccagccggcctgccgctcacacacgaggctgctctgaagtggttctataaa
gacccccagggagagatgcagggtccgttcagtaacccggagatgacagagtggttccag
gcaggctacttcacaatgaccctgctggtgaagagaggctgtgacgaggtcttccaaccg
ctgggggagatcatcaaaatgtggggcagggtgcccttcgcccctggaccagcaccgcca
cccttactgggtgacgctggggaccaggagcgtctgaaactgcagcaggagctgactgcc
ctcaacctgtaccagctgcagcagctgcagtaccagtacctgttgaggcagcagtacgcc
caggccctggcccagcagaaagcccaggccctcagctcagcaccgcaccagcagcagcag
cagcagcagcagcagatcaacctgctcctccagcaataccaggccctcaagatgaggtca
gcggaacacacaacatccgagagtctcttaactccggtgacgcggtccatgtctgtacca
gactcccagggttctgtgtgggaaatgcagcacccctcctctcaggtctcttgcacacca
aacatccagcaacctgccccaagtgcgtgggagggcagcagtgtgtgggatctgcccata
gactccatggcccaggcccccaccatagaacagatgcaacagctggagaagaacaaggct
gctaaggtctctcctcctcatctactggagatggagcggcgtgaggctgagctgagggcc
aagagggaagaggaggagaaggagaggaaaagactggaggaagcgttacggtcccgacag
gaggcggaacgcaaacgcctggaggaggagctatcacgtcataaacaggaggaggagttg
aggcagcgggagcaggaggaggcacagcgcagacagaaggaggaagaggaacggcaggca
caggaggaggctctccgcagactagaggaaaggaggagggaggaggaagagcggcagcaa
agggaagagttcctccgtaaacaggaggaggagcaccggaagcaggaggaggagcgccgg
gaggaggagcgccggaagcaggaggaggagcgccggaagcaggaggaagagcgccggaag
caggaggagctggaggccctgaggaggtgcgaggaggagaagcggctggaggaggaggcg
gtggcggccgcgatggcgttggcaaggcaacagcaggaagaggcgaagaggagggagcag
gaggccgcgaggcagcaggagctagccagacagaggcaacagcagcaggaggcgctccgc
cgactacagcagcaacagcagcagcaacagctagcccagatgaagctgccgtcgtcctca
aagtggggccagcagtcagcagtcacggcagcagccatctcccagtcccagaacgccttg
tcgctctctgagatccagaaagtggaggaggagagggaacgacaagcacgagaagagcag
cggcgccagcaagcagagctcctaaagctccagcagcagcaggccctgcaggaggccctg
cagcctcaggccaagctctctggttggggcagcgtggccaagcagccggccgctaccaag
tccctgctggagatccagagggaggaggcccagcaggtgaagcagaggaaagagcagggg
ggtgggagccagcagcccagtcaccccaccgtcacccagtcgaaccgcgcccagaacaga
gctaccactgctctgagttcctcagtgtggggctcggtggccaccagcagcatgggcggc
ggagctcctaactggggtggagaaagcagcagcatctggggcgacagcaccaactccaac
atgggcttctgggacgagacggcccagcccccgccacaggccccaccccccgccaggaag
cccaacgctcagaagaacaacaaggccaacgccaacctcagcagtcgggccaataagaag
gtggtggaggaggaggagaagctgctgaagttgttccagggggttaataagagccagcag
gatggcttcatgcagtggtgtgagcagaccctgcacaccctcaacaccgccaacaacctg
gatgtcccgacatttgcgtctttcctgaaggaggtggacagtccgtacgaggtgcacgac
tacgtgcgcgcctacttaggggacacgtctgaggctaaggagtttgccaagcagttcctg
gaacgccgtgccaagcagaaggccaaccaacagaaagagccccaggccccacagaaccag
cagccgactctcaaacagcgacagcaacagcaggattcagtgtggggcgtgagcgggacg
ggctctccgtctcggtaccagtcgaaccacaccagcctccagcagcaggcacgtttcgag
acagtcacctcagggaagaagaagaaaaagcagaagatggtccgggcagaccccagcctg
ctaggtttttctgtgaacgcagcgtctgagaggttgaatatgggcgagatagagacggtg
gaggacttttaa
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