Oncorhynchus nerka (sockeye salmon): 115114343
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Entry
115114343 CDS
T07952
Name
(RefSeq) paired box protein Pax-3-like isoform X1
KO
K09381
paired box protein 3/7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115114343
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115114343
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Pax7
Homeodomain
HTH_32
HTH_23
Homeobox_KN
HTH_SB
HCV_capsid
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
115114343
NCBI-ProteinID:
XP_029498353
LinkDB
All DBs
Position
LG9b:complement(16185799..16221652)
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AA seq
492 aa
AA seq
DB search
MTALAGGIPRMMRPNPHQNYPRGGYSLEVSTPLGQGRVNQLGGMFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGSIGGSKPKQTTTPDVDKKIEE
YKKDNPGMFSWEIRDKLLKDGICDRNNIPSVSSISRIMRCKFGGVGGEDEEDDDEIQKRE
LEENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFSAEQLEELERAF
ERTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSA
MSSLQPYQLSDTPYPPTSISQTVSEQHSTVHRPQPLPPTSVHQGGLGSSVGTQDGSSAYC
LSSGRHGFSGYSDSFVPPPGHSNPVNPSISNGLSPQVMGLLNPGGVPHQPSHQSDFALSP
LTGGMEPGGGMAASCHGSQRGLEGLPGLTSMPTLPNSQSYCPPTYTSPAYAMDHHPSYQY
GQYGQSKVPFII
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacagcactagcggggggcataccgaggatgatgcgcccgaacccacaccaaaactac
ccgcggggaggctactctctggaagtctctaccccgttaggccagggccgggtgaaccag
ctcggtgggatgtttatcaacggcagacccctgcccaaccacatccgccacaagatcgtg
gagatggcccaccacggcatccgaccctgtgtcatctcccgccagctccgagtctcccat
ggatgcgtgtccaaaatcttgtgccggtaccaggagacaggctccatcaggcccgggtcc
atcggaggcagcaaacccaagcagacaacaaccccagatgtggacaagaagatcgaggaa
tacaagaaagacaacccgggcatgttcagctgggaaatcagggataaattactcaaagac
gggatctgcgacagaaacaacatcccctcggtgagttcaatcagccgtatcatgcgttgt
aaattcgggggagttggaggagaagatgaggaggacgatgatgaaatccagaaaagggaa
ttggaagagaacgaaagacgagcgaaacacagcatcgacggcatcctcggggatagatcc
agccactcagacgagggttcggacgtggactccgagccgggcctgccactaaagaggaaa
cagcgccgcagtaggaccaccttctcagccgagcagctggaggagctggagagagccttt
gaacgaacacactaccctgatatatacaccagagaagagctagctcagagggccaaactc
acagaagccagagttcaggtgtggttcagcaacaggagagccaggtggaggaaacaggca
ggagccaatcagctaatggcatttaatcacctgatccccggcggtttcccaccttcagcc
atgtcgagcttgcagccatatcagctgtcagacaccccctaccctcccacctccatctca
caaacagtgtcagagcagcacagtacggtccacaggcctcagcctctcccccccacctcg
gtgcaccagggtgggcttggctcctcagtggggacccaggacgggagttcggcctactgc
ctgtcctccggacgccacggcttctcaggctactcagacagctttgtgcctccccctggc
cactccaacccagtcaaccccagcattagcaacggcctctcaccgcaggtgatggggctg
ttgaacccgggaggagtgccccaccagcctagccaccagagtgactttgccctctctccc
ctgactggtgggatggagcccgggggtggtatggcagccagctgccacggctcccagcgg
ggcctggagggtctgccaggcctgaccagcatgcccaccctgcccaactcccagtcctac
tgcccgcccacctacacttccccagcctacgctatggaccaccacccctcataccagtac
ggacagtatggacagagcaaggtgcctttcattatctga
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