Oncorhynchus nerka (sockeye salmon): 115114344
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Entry
115114344 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 3-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115114344
00071 Fatty acid degradation
115114344
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115114344
09143 Cell growth and death
04216 Ferroptosis
115114344
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115114344
03320 PPAR signaling pathway
115114344
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115114344
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115114344
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115114344
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115114344
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115114344
Exosomal proteins of breast cancer cells
115114344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115114344
NCBI-ProteinID:
XP_029498355
LinkDB
All DBs
Position
LG9b:16257134..16281635
Genome browser
AA seq
715 aa
AA seq
DB search
MKLKEDMNPLLLQVFRSVVWVYSVITFLPWYLLSGAGANLDRARRVKARSVSGRPAGPYR
ATNHEDGSQQKLVSSLHPGVDTLDKVMEHGAARFPERNCLGTREVLSEEDELQPNGKVFK
KVILGEYQWMSYEETYQAAVCFGSGLAALGQRPQCNIAIFCETRAEWMIAAQACFIYNFP
LVTLYSTLGGAAIAHGLNETEITHIVTSKDLLHSRLKDILLEVPRLQHIIVVDSKPTSWP
GFPRGIMVHNMDAVQELGSRPDNMAVARRRPVPSDIAVIMYTSGSTGIPKGVMISHSNII
AGVTGMAERIPDLDETDTYIGYLPLAHVLELSAEMVCISHGCCIGYSSPQTLADQSTKIK
KGSKGDTSVLKPTLMAAVPEIMDRIYKNVMTKVEEMSSVQRTLFVLAYNYKMEQITKGYK
TPLCDSLVFRKVRSLLGGHMRVLLSGGAPLSAATQRFMNICLCCPVGQGYGLTETCGAGT
ISEMWDYSTGRVGAPLICSEITLKDWEEGGYYSTDKPHPRGEIVIGGPNVTMGYYKNEVK
NREDFFVDSNGQRWFCTGDIGEFHPDGCLKIIDRKKDLVKLQAGEYVSLGKVEAMLKNCP
FVDNICAYANSDQSYVIGFVVPNQKQLMALAEQRGLRGSWEEICNNPDMERDVLHIITEA
ALSAKLERFEIPRKICLSAEPWTPETGLVTDAFKLKRKELKSHYQEDIERMYGGK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaactaaaagaggacatgaacccactgctgctgcaggtcttccgctcggttgtctgg
gtctactctgtcatcaccttcctgccctggtacctgctctcgggtgcaggagccaaccta
gaccgggcgcggcgggtcaaggcacggtcagtgagcggtcgcccggcgggcccttaccgg
gcgaccaaccatgaggatggtagccagcagaagctggtgtcttccttgcacccaggagtg
gacaccctggacaaggtgatggagcatggagcggccaggttcccagagaggaactgcctg
ggcacgagagaggtgctgagcgaggaggacgagctccaacccaacgggaaggtcttcaag
aaggtgatcctgggggagtatcagtggatgtcgtatgaggagacctaccaggcagcagtg
tgttttggcagtgggctggccgcgctgggccagaggcctcagtgtaacatcgccatcttc
tgtgagaccagggccgagtggatgatagcagcacaggcctgcttcatatacaacttccca
ttggtgacgttgtactctactctgggcggagcggccattgcccacggtttgaacgagact
gagatcacccacatcgtcaccagcaaagacctgctacacagccgtctcaaggacattctg
ttggaggtgcctcggctgcagcacatcatcgtggtggacagtaagccaaccagttggccc
ggcttcccccgcggcatcatggtccacaacatggacgccgtgcaagagctgggctccaga
cccgacaacatggcggtggcgcgccggcggcccgtgccctctgacatcgctgtcatcatg
tacaccagcggctccacgggcatccccaagggcgtcatgatctcccatagcaacatcatc
gcgggcgtcacaggcatggcagagcgcattccagacctggatgagacagacacctacatt
gggtacctgccactggcccatgttctggagctgagtgcagagatggtgtgtatctctcac
ggctgttgcatcggatactcctccccacagacgctagcagaccagtcgactaagattaag
aagggcagtaaaggagacaccagtgttctaaaacctacactcatggctgctgtaccggag
atcatggatcggatctataagaatgtgatgacaaaggtggaggagatgagcagtgtgcag
agaaccctctttgtattggcctacaactacaagatggaacagatcaccaagggctacaag
accccgctctgtgacagtctggtgtttaggaaagtgcgctcgttgttggggggtcacatg
agggtgctgttgtcaggcggagcgcccctctccgctgccacccagcgcttcatgaacatc
tgcctctgctgtcccgtgggccagggctacggcctcaccgagacctgcggagctggcacc
atcagcgagatgtgggactacagcacaggccgggtcggcgctcctctgatctgctccgag
atcaccctcaaggactgggaggagggcggttactacagcacagacaagccacacccgaga
ggggagattgtaatcggcgggcccaacgtgactatgggttactacaagaacgaggtgaag
aaccgcgaggacttcttcgtggacagcaatggccagcgctggttctgtacaggagacatc
ggggagtttcacccagacgggtgcctcaagattatcgatcgtaagaaggatctggtgaag
ctccaggctggggagtatgtgtctctggggaaggtggaggccatgctgaagaactgccct
ttcgtagacaacatctgcgcctacgcaaacagtgaccagtcgtacgtgattggctttgtg
gtgcccaatcagaagcagttaatggcgctggcggagcagcgagggttacggggcagctgg
gaggagatctgtaacaaccctgacatggagagagacgttctccacatcatcacagaggcc
gctctgtcagccaaactagagcgctttgagattccgaggaagatctgtctgagtgcagag
ccttggacaccggagactggcctggtgaccgacgcattcaaactcaaacgcaaggagctc
aaatcacactatcaggaagacatcgagagaatgtacggtggcaagtaa
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