Oncorhynchus nerka (sockeye salmon): 115114422
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Entry
115114422 CDS
T07952
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115114422
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115114422
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
115114422
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
115114422
NCBI-ProteinID:
XP_029498493
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Position
LG9b:complement(20810795..20895040)
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AA seq
650 aa
AA seq
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MSESNSNAACTADQNGAVPGEPVKTDKNSRRGNWGNQIEFILTSVGYAVGLGNVWRFPYL
CYRNGGGAFMFPYFIMLVFCGIPLFFLELSFGQFASQGCLGVWRISPMFKGVGYGMMVVS
TYIGIYYNVVICIAFYYFFSSMTNLLPWTYCNNPWNTPTCNGVVTPRGINNTMANVTRSL
VTGAAEVAVEVVNKTKRTSPSEEYWKHYVLQISDDIGNFGEVRLPILGCLAVSWVVVFLC
LIRGVKSSGKVVYFTATFPYVVLTILFIRGITLEGAVTGIKYYLTPQWHKILDAKVWGDA
ASQIFYSLGCAWGGLITMASYNKFHNNCYRDSIIISITNCATSVYAGFVIFSILGFMAHH
LNVDVSEVADHGPGLAFVAYPEALTLLPISPLWSLLFFFMLILLGLGTQFCLLETLVTAI
VDEIGTDWIVRNKTVVTGGVAIVGFLLGVPLTTQAGIYWLLLMDNYAASFSLVIISCIMC
ICIMYVYGHKKYFKDVEMMLGFPPPIFFRVCWRFVSPIIISFILIFTVIQYKPITYNDYV
YPGWSLAIGFLMAMSSVICIPIYALYKIAKSEGTTFLERLKNSCKPDVKWGPALSEHRIG
LYATPGSEGEVEVRPLKEELKEKEDEKGDEISLTIQGSNGSTAHNTTPSA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtccaacagcaatgcagcctgtacagccgaccagaatggagctgttccagga
gaacctgtgaagacggataagaactccaggagagggaactggggaaaccagatagagttt
atcctcaccagcgtgggctatgccgtgggcctgggaaacgtatggaggttcccctacctc
tgctatagaaatggaggaggagccttcatgttcccctacttcatcatgttggtgttctgt
gggatccccctgttcttcctggagctctcatttggacagttcgccagccagggatgtctg
ggggtttggaggatcagccccatgttcaaaggtgtgggctacgggatgatggtggtgtcc
acctacatcggtatctactacaacgtggtgatctgcattgccttctactatttcttctct
tccatgaccaacctcctgccgtggacctactgcaacaacccctggaacacgcccacctgc
aacggtgtggtgactcccaggggcatcaacaacaccatggccaacgtcacccgcagcttg
gtcaccggggccgctgaggttgccgtggaggtggtcaataagaccaagaggaccagcccc
agcgaggagtactggaaacactacgttctgcagatctcagacgacatcgggaatttcggt
gaagtccgtctccctattctgggatgtctggccgtgtcatgggtggtggtcttcctctgt
ctcattagaggagtcaagtcttcaggcaaggtggtgtacttcacagccacattcccctac
gtggtgctgaccatcctcttcatcagaggcatcaccctggagggagctgtcaccggcatc
aagtactaccttaccccacagtggcataagatcctcgacgctaaggtgtggggggacgct
gcctctcagatcttctactctctgggctgtgcatggggtgggctcatcactatggcctcc
tacaacaagttccacaacaactgctacagagacagcatcatcatcagcatcaccaactgt
gcgaccagcgtgtatgcaggctttgtcatcttctccatcctgggcttcatggcccaccac
ctgaacgtagatgtatctgaggtggccgaccatggtcccggcctggccttcgtggcctac
ccagaggccctcactctgctgcccatctcccccctctggtccctgctcttcttcttcatg
ctcatcctgctgggcctggggacgcagttctgcctgctggagaccctggtgacagccatt
gtggatgagattggtactgactggatcgttaggaacaagactgtagtcacaggaggagtg
gctatagtgggcttcctgctgggggtgccgctcaccacacaggctgggatctactggctg
ctgctgatggataactatgctgctagtttctctctggttatcatctcctgcatcatgtgc
atctgtatcatgtacgtctatggacacaagaaatacttcaaggacgttgagatgatgctg
ggtttcccccctccaatcttcttccgggtctgctggagattcgtgtcccccatcatcata
tcttttatcctgatcttcacagtgatccagtacaagccgatcacctacaacgactatgtg
taccccggctggtctctagccatcggcttccttatggccatgtcctccgtcatctgcata
cccatctatgctctctacaagatcgccaagtctgagggaaccacatttttagagcggttg
aagaattcgtgcaagccagacgtgaagtggggcccggccctgagtgagcatcggataggc
ctctacgccaccccaggctcagagggagaggtggaggtgcgtcccctgaaagaggagctg
aaggagaaggaggatgagaagggggatgagatcagcctcaccatccagggcagcaacggc
tcaacagcacacaacactacccccagcgcatag
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