Oncorhynchus nerka (sockeye salmon): 115114428
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Entry
115114428 CDS
T07952
Name
(RefSeq) target of EGR1 protein 1-like isoform X1
KO
K13202
target of EGR1 protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115114428
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
115114428
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GFIT
Motif
Pfam:
CAF1
zf-CCCH
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
115114428
NCBI-ProteinID:
XP_029498514
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Position
LG9b:complement(21343672..21348250)
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AA seq
581 aa
AA seq
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MTSSMIVPVIDVQNDNFKELWPAMVLAIKTASFIALDTELSGLGSRKALLAECIEDRYKA
ICNAARTRSILSLGFACFKKLENKDDDTYLVQVYNLTLLCSEEYVIEPQSVQFLVQHGFD
FNKQYAEGVPYLKGNDKGGDSHGINMRMLFVELLRARKPLVLHNGLIDMVFLYQCFYAHL
PDKLGTFTADLSQMFPAGIYDTKYATEYELRFAASYLEYAYKKCKLDNMKSLEVGGNGHH
LFLEFCKYSGHLSSYVDFRPCLAGSSLEGPLNVCQRFSAYGWCPNGSQCPLSHDTDLIIQ
HDEKNQVEKKKKRKRKRRNSFQGNVDVEGASENKQVHMELKDGEQGPDQVIPDSKPPPAT
EKVDGTPVQGSESGEKMITEKVDEGNGVAEPQAVSADEEIKTDKEKVEGNGVAEPQAVSA
DEEIKTDKEKVEGNGVAEPQAVSADEEIKTDKEKVEGNDVSEPLATSDASEPLATSDAAK
KEKSKRKKLEGGSHRAGFDAFMTGYIFSYATTLTERVGEPPCSESWLPECLNKVYLSGKS
VPMHIVKSTFSKSSKAHMHKMDIVWGKSFSSSVASKAEGTV
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctccatgatagtccctgttattgatgtgcaaaatgataatttcaaagaactg
tggcctgctatggtccttgcaatcaagacagcctccttcattgcactggatacagaattg
agtgggcttggaagcagaaaagctctgctggcagaatgcatagaggaccgttacaaagcc
atatgcaatgcagctcgcacacgctccattctctcccttgggtttgcttgctttaagaaa
cttgaaaacaaggatgatgatacgtaccttgttcaggtgtacaacctgacgttgctctgc
agtgaggagtatgtaattgaaccacaatctgtgcagttcctggtgcaacatggatttgac
ttcaacaaacaatatgctgagggtgtcccttatctcaagggcaatgacaagggaggggat
tcccatggaataaacatgcggatgctgtttgtggaactcctgcgtgctcgcaagccattg
gttctacataatggcttgatcgacatggtgttcctgtatcagtgcttctatgcccacctg
ccagataaacttggcactttcactgctgacctgtcccagatgttcccagctgggatatat
gacaccaagtacgccacagagtatgagctgcgctttgctgcctcttacctggagtatgcc
tacaagaaatgtaaattggacaacatgaagtctcttgaggttggtggtaatgggcaccat
ctgttcctggagttctgcaaatactcaggccacctgtccagctatgtggacttcaggccc
tgcctggccgggtctagcctggagggaccgctgaatgtctgccagcgtttctctgcttac
ggttggtgccccaatgggtcacagtgtcccttgtcacatgacactgacctcatcatccag
cacgatgaaaaaaaccaggtggaaaagaaaaagaaacggaagaggaaaagaagaaactct
tttcagggaaacgtggacgttgaaggtgcctctgagaataagcaggtccatatggagctg
aaggatggagagcagggcccggaccaggtgatccctgacagcaaacctccccctgccaca
gagaaggtagatgggactccggtacaggggtcagagagcggtgagaaaatgataaccgag
aaggtagatgaaggcaacggagtcgcagagccacaggctgtgtctgcagatgaagaaatt
aagactgacaaagaaaaggtggaaggcaacggagtcgcagagccacaggctgtgtctgca
gatgaagaaattaagactgacaaagaaaaggtggaaggcaacggagtcgcagagccacag
gctgtgtctgcagatgaagaaattaagactgacaaagaaaaggtggaaggcaatgatgtg
tcagagcctctggccacatctgatgcgtcagagcctctggccacatctgatgcagcgaag
aaagaaaagtccaagaggaagaagctggaaggaggttcccaccgggcagggttcgatgca
ttcatgaccggctacatcttctcctatgccaccactctgacagagagagtgggtgagcca
ccgtgttcagagtcctggctcccggagtgcctgaacaaagtttacctcagtggcaaatct
gtcccgatgcatattgtcaagagcaccttctccaagtcctccaaggctcacatgcacaag
atggacattgtgtggggaaaaagcttttctagcagtgtggcaagcaaagcagagggaact
gtataa
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