Oncorhynchus nerka (sockeye salmon): 115114446
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Entry
115114446 CDS
T07952
Name
(RefSeq) sickle tail protein homolog isoform X1
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AIP3
Motif
Other DBs
NCBI-GeneID:
115114446
NCBI-ProteinID:
XP_029498543
EnsemblRapid:
ENSONEG00000015591
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Position
LG9b:22314418..22392227
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AA seq
2122 aa
AA seq
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MTSKSSRLGRPSSAGSKQPSQRKDCPVGNRSCMLRVGERLMRAGSEGNLHVVRPKPVQQT
PLEEGHQQSSSITPKELGNNNQRDSSPEDVERFHRQQTVENQNHHSEPRSPSTVPRRYTI
GGQGPRSARDPLTMQHADVERKKEVFLEHLKQRYPHHAAVIMGHQDHLRDHVRSPQHSAS
PPPSIGEQLEHLSLESLETMSEGDGPAVFTRGCQARASLPVVRSANQTRDRSLGVLYLQY
AEETKQIRMPNEITSIDTIRALFVSAFPQQLTIKMLESPSVAVYIKDETRNMYHELTDVR
NITSRCCLKVYHKDPAHAFNRSNARPNNAEGRIPREILYGSHSPVHTLQSTCSPVHSIQG
SMSPPTVRSMPSSPSRIPYGHRSGGGVPGSATLPRASMSSGPPSRSVTPSPSAILERRDV
KPDEDLSSTSMALVRADGLYVNVIDPYAVQEGRLSIASSQGGGHMGDMVDIGGGSLHRAL
VKSPASYTENPEQQHSLYRQKSRRYGESQGLPPLGTKTPPPSPHRLNDNHGPVASERGSP
FRRSLRKESNGNTVEVVNRTRGSVSSVSSSPVFVELPSGHYGDRLFQGHFTPNDPQTSER
MKAMEQQIASLAGLVQHALAIGPAEIDRMTASPFHVNNSAGVSPVPASRTPALLADGFNA
LVPQAPSPDSTLQVTLTTVRRNVTDLRQQLHQLRQLQMQNQDSVKGMLKRAEEELAEVMS
ETLQRQQQETEPGQRQRTTVDEERRKYQAMEERVLAQLRELEEYVDRLRRDSSSGKGQLS
ITLRDVEEGAVNLRRVGEALAGLKGEFPSLHGKMRTVLRVEVEAVRFLKEEPHKMDSMLK
RVKALTEALSGLRRCVTENHPHNPEPGAATAERGVEPAIAQSEPPRKNLPTMESPKPQPR
PSVRPPQPQVKNPAGRPDTVPTSPDIVHRVKSSPVNMHSCQHSAALPHHPSPPLTSTHGR
DSPTVAKVSPRSRENSPALQKRIVPWCGDGPAPTASSTETTSQPPGSEEIHTNRGSIKHI
VMNVETAEREQDLEEGRSPQNSAATSSGSEFEQILQEAQASLMKAIPDLEVTETGRREAQ
SSPPPLAPDQPSLPGPELPLNPPLPDEVDAPQPTEASLPEPTQAADVAAEVTVQVSTERP
HKSMVEKPRRPSVEREMKNSPEKSGKSLPPPPPRRFFPSLSGPGLTTGRSGEVIFTTRKE
ATTAQDDEEAVVPQPSPKPTRQPPEVKPKPQTTPVFIASAEPGEKEDEEEEDDDEEEDKF
MKELQVFQKYTLRDVSTKCVIDLTSTASQVRQIEPELSLSPKDPKESQENKGKEKSVCNT
DENRFVIVPKSPRVMYYVTGQLSNEKPPSGKTDQSEGREGTLSPSQVANSNKFDSQQTEL
LIADTTPLVSCNSVLESQDCPPNIQKIAVGEDSGKESVVDENVQKDPVQCQKVGVVEPVS
PPIPAEKQDISEPSQQDCYLTNSKPSSPSSSSPPPSSPASPPLPLSSSLPVPVIQFVSST
GQEVSGSPGSPPESRGLGDSQGQQVVLRSFRSRAPRYVEEGSSLSPDLPDEEGPPPPENI
SFMMITSNRVQALSTGEYQEIVNGTSMSEVQTVSVGNDTTSISQEHSGFDRKPVIIIFDE
PMDIRSAYKRMSTIFECEEELDRLLHQESIKEEAEEAGSEKSVPQVKSNTYLHQANKTAV
TGNTATSHHNTPAVVAQQKSTAECSLPEQSKTEPSNTSKPETKKKFKFKFPKNKLAAISQ
AIRTGTKTGKKTLQVVVYEDEEEWDGHMNETERFEINSSSIPQTDFSHLTSVNNITSPST
LTRSNSKRRTEEICKNAYDSITSLEETIKQLEITVDNISPAAPNTDSCEESPATVKSQRE
RSPSKRPAPPQVSKFLKHPQSKKSKPELPRPSITSSSKKQNTSGSPSSSQMSLSVSAKSW
QQPAGSADKPGGKTQKQFPQANRSAEKAGGDSNHYFLALPASKIPAFCHNSGKNMSLPGP
NTVSNPIKSPSSSPSSSHKSFIPSLNLSRLVPPSPSFNDRRQNLSLSSQTQNGRPSPFSH
CSSSSSSSTSPSSNSSSLSPTSTSSTSSSPPSPSLLSPTAMSQGARSIHRIAHIPSFTGQ
KMQGGYSSKTTHTPAASLSKDI
NT seq
6369 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaagtcgtccaggctgggcagaccctcatcggcagggtccaagcagccctct
cagaggaaggattgcccggtgggtaaccgatcctgtatgctgcgggtcggggagaggctg
atgagggctgggagtgaggggaacctacatgtagtgagacccaaacctgtccagcagaca
cccctggaggaaggacaccaacagtccagctccatcacacccaaagagttaggaaacaac
aaccagagagactcatcacctgaggacgtagagcgtttccacaggcagcagactgtagag
aaccagaaccaccactctgagccacgttcccccagcacagtccccaggaggtacaccatc
ggagggcaagggccccgcagtgccagagaccccctgaccatgcagcacgctgacgtagag
aggaagaaagaggtgttcctggagcacctgaagcagaggtatcctcaccatgctgctgtc
atcatgggccatcaggaccacctcagagaccatgtcaggagcccccagcactctgccagc
cccccgcccagtataggggagcagctcgagcacctctcgttggagtctctggagaccatg
tcagagggagacggtccagcggtcttcacccgtggctgccaggcacgggccagcctgccg
gtggtccgctctgccaaccagaccagggacagatcattaggtgtgctgtacctgcagtac
gcagaggaaaccaagcagatccggatgcccaatgagattaccagcatagacacaatcagg
gctctgtttgttagtgctttcccccagcagctcaccataaagatgctggagtctcccagt
gtagctgtgtacatcaaagatgagaccaggaacatgtaccacgagctaactgatgtcaga
aatattacatctcgatgctgtctgaaggtgtaccacaaagaccctgcacatgccttcaat
cgcagcaacgcaaggcctaacaatgctgagggcaggataccaagggagatactgtatgga
agtcatagccctgtgcacactttacaatccacctgcagtcctgtccactccatacagggg
tccatgtctccccccacagtccgctccatgccctcctccccctccaggatcccctatggc
caccgatcagggggaggggtgccaggcagtgccaccctccccagggccagcatgtccagt
gggccccccagcaggtccgtcacaccctcccccagtgccatcctggagagaagagacgtc
aaacctgacgaggacctgagcagtacaagtatggcgctggtgcgtgccgacgggttgtat
gtcaacgtcattgacccctacgctgtccaggagggccggctgagtatcgcctcctcccag
gggggcggccacatgggagacatggtcgacataggtggtggtagcctccaccgagccttg
gtcaagtccccagcctcctatacagagaacccggagcagcagcactccctctacaggcag
aagtcccggaggtacggggaaagccagggactaccgccactcggcaccaaaaccccgccc
ccttcccctcatagattgaacgacaaccacggccctgtggcctcagagaggggctctcct
tttcgccggtctctgcggaaggagagtaatggtaatacagtggaggtggtgaacaggacc
aggggtagtgtgtcctctgtgtcctcctctcctgtgttcgtggagctcccctcagggcac
tatggggacaggctgtttcagggacacttcacccccaatgacccccagaccagtgagcga
atgaaggccatggaacaacagattgccagtctggctggccttgttcagcatgcacttgct
attgggccagctgagatagataggatgactgcttctcctttccatgtcaacaacagtgca
ggagtgtcaccagttcctgcatccagaacccctgccctccttgcagatggcttcaatgct
ctagtccctcaggccccttcccctgactccaccctgcaggtcacactgaccacggtcagg
aggaacgtcactgacctccgacagcagcttcaccaactccgacagctacagatgcagaac
caggacagtgtgaaggggatgctgaagagagcagaggaggagctagctgaggtgatgtct
gagaccctacagagacaacagcaggagaccgagcctggccagagacagaggacgacggtg
gacgaagagagacgcaagtaccaggccatggaggagagagttttggcccagctcagggag
ctggaggagtatgtggaccgtctgaggagagactcgtcctccggcaaaggtcagctgtca
atcaccctcagggacgtggaggagggagctgtcaacctcaggagggtgggagaggccttg
gctggacttaaaggtgagttcccaagcctgcatgggaagatgcggacggtgctgcgtgtg
gaggtggaggcagtgcgattcctgaaggaggagcctcataagatggacagcatgcttaag
agggtcaaagccctgacagaggctctcagtggtctcagaagatgtgtcacagagaatcat
cctcacaatcccgagcctggagcagccacagcagagcggggtgtagagcctgcgattgcc
cagtctgaacccccccggaagaatctccccaccatggaatcccccaaacctcagcccagg
ccctctgtcagacctccccagccacaggtcaagaaccctgcaggcaggccagacacagtc
cccacctcacctgacattgtccaccgtgtgaagagctctcccgtcaacatgcattcttgt
cagcactcagcggctctgccacaccaccccagccccccactgacctccacccacggccga
gactcccccaccgtggccaaggtcagtccccgcagccgagagaacagtccggccctgcag
aagagaatagtcccttggtgtggcgatggaccggcacccacggccagcagcactgagacc
acctcacaaccacctggttcagaggagatccacaccaacaggggcagcatcaaacacatc
gtcatgaatgttgagacggcagagagagagcaggacctggaggaggggaggtcgccacag
aactcagcagccacctcttctgggagtgagtttgagcagattctccaggaggcccaggcc
agcctgatgaaggccatacccgacctggaggtgactgagaccgggagaagggaggctcag
tcctcccctccacccctagctccagaccagccatctctcccaggcccagagcttcccctc
aaccctccactgccagacgaagtagatgcccctcaacctactgaggcatctcttccagaa
cccactcaggcagctgatgtggctgctgaggtgactgttcaggtcagcactgagcgacca
cataagtctatggttgaaaagcctcgcaggcccagtgtggagagagagatgaagaacagc
ccagagaagtcagggaagtctcttccaccacccccaccacggaggttcttcccttcactg
tccggcccagggctgaccacagggaggtctggagaagtcatctttactaccaggaaggaa
gccaccaccgcccaggatgatgaagaggcggtggtccctcaacccagtcccaaacccacc
agacagcccccagaggtcaagcccaagccccaaaccactcctgtttttatagcctcagct
gagccaggggaaaaggaggacgaagaagaagaggatgatgatgaggaggaggataaattc
atgaaggaactacaggtgtttcagaagtacactcttagagatgtaagcacaaagtgtgtc
atagaccttacaagcactgcatctcaagtcagacagatagagccagaactctctctctca
cccaaagacccaaaggagagtcaggagaacaagggtaaagagaaaagtgtgtgcaacact
gacgaaaacagatttgtcattgttccaaagagtcccagggtcatgtattatgtcacaggg
cagttatccaatgagaagcctccatcgggaaaaacagaccaatcggaaggcagggaggga
acattgtccccctcacaggtggcaaactcaaataaatttgactcccagcagacagagtta
ctaatagcagacacaacacctctggtatcatgtaactcagtgctggaaagccaagattgt
cctcctaatatacagaagatagcagttggagaagatagtgggaaggagagcgtcgttgat
gagaatgtccagaaggatcctgttcagtgtcagaaagtgggggtagttgaacctgtgtct
cctccaatacctgcagagaagcaggacatatctgaaccttctcagcaagactgttatctt
actaacagtaaaccatcatcaccttcgtcatcatcaccaccaccatcttcaccagcatca
ccaccacttccactatcatcatctttaccagtaccagtaatccagtttgttagtagtaca
ggccaagaggtttcaggtagtccagggtctccaccagagagcaggggcctgggtgacagc
cagggccagcaggtagtgttgaggtccttcagaagcagagcaccacggtatgtagaggag
ggcagcagcctgagccctgacctcccagacgaggagggccctcctccccctgagaacatc
tccttcatgatgatcaccagcaacagagtgcaggctctgtccactggggagtaccaggag
atagtgaatggtaccagcatgtccgaggttcagaccgtcagtgtggggaacgacaccacc
agtatcagccaggagcacagtggcttcgacaggaagcctgtgatcatcatattcgacgag
cccatggacatccggtcggcctacaagcgtatgtccaccatctttgagtgtgaggaggag
ctggataggctgctgcaccaggagagcatcaaggaggaggcagaggaggcaggatcagag
aagagtgtacctcaggtaaagtctaacacttatctacatcaggcaaacaagacagcagtg
acaggaaacactgcaaccagtcaccataatactcctgctgtggttgcgcaacagaagagt
acagcagagtgctcattaccagaacagtctaaaacagagccctcaaacaccagcaaacca
gagaccaaaaagaagttcaaattcaagttccccaaaaataagctggcggccatcagccag
gcgattcgcactgggaccaaaacagggaagaagacacttcaggtggtggtctatgaggac
gaggaggagtgggacggacacatgaatgagaccgaaaggtttgagatcaacagcagtagc
ataccacaaactgactttagtcacctcacctctgtgaataacatcacgtcaccaagcact
ctcaccaggtcaaactctaaacgcaggacagaggagatctgtaagaatgcctacgactcc
ataaccagtctagaggagaccattaaacagctggagatcactgtggacaatataagccca
gcagcgcctaacaccgactcctgtgaagagtctccagccacagtgaaatcccaacgagag
agaagtccctccaagaggcctgcccctcctcaggtctcaaagttcctgaagcatcctcag
agtaagaagtccaaaccagagcttcccaggccatccatcacaagcagctccaagaaacag
aataccagtggctctccttcttcaagtcagatgtcactttctgtgtctgcaaagtcctgg
cagcaaccagccgggtcagctgacaaaccaggaggaaaaactcagaagcagtttccacag
gctaacagaagtgctgagaaagctggtggggatagtaaccattatttccttgctttacct
gcttctaagatcccagccttttgtcataactctggaaaaaatatgtcattgcccggtcca
aacactgtgtctaaccctattaaatcaccttcctcctccccatcctcctcacacaaatct
ttcatcccgtctcttaatctgagtcgtctcgtccctcctagcccttctttcaatgacaga
cgtcaaaatctttccctctcatcacaaacccaaaatggccgacccagccctttctctcac
tgctcatcttcctcttcctcctccacctccccctcttccaactcctcctctttgtccccc
acatccacgtcctccacgtcctcctcccctccctctccttccctcctctccccgactgcc
atgagtcaaggtgcgaggagtatccaccgcattgctcatatacccagcttcaccggacaa
aagatgcaaggtggatacagcagcaaaaccacacatacaccagcagcttctttgtcaaag
gacatatga
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