Oncorhynchus nerka (sockeye salmon): 115114488
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Entry
115114488 CDS
T07952
Name
(RefSeq) rho GTPase-activating protein 21-like isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115114488
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Others
Others
115114488
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115114488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH_9
PH
PDZ_6
PDZ
PH_11
PDZ_2
Motif
Other DBs
NCBI-GeneID:
115114488
NCBI-ProteinID:
XP_029498614
LinkDB
All DBs
Position
LG9b:23957392..24027816
Genome browser
AA seq
1868 aa
AA seq
DB search
MMASHWKGPCDEEDEGLTRSSLCENNVPEWRVQGDSPAGLFNLQGEEEPFSWPGPKTLRL
RRTSQGFGFTLRHFIVYPPESAVHPIPFLEEEHGRRGRQRNRLEPMDTIFVKQVKEGGPA
NEAGLCTGDRIVKVNGASIIGKTYSQVIALIQNSDAFLDLCVMPKDEDILQLAYSQDAYL
RSRSTYSGNAHHIPEPPPICYPRVDCKPPGMAQATETPSPVGVGVQGACRGATPPDTGYR
MEIPVPPSPPPAHPYPKSQTAACMRNDSVRTVVVPPELGRIGPAHRIDYSLVGSPDPGLI
RVRPGSVSHYPLPRKTDIYPSGASLFNYSAPLHQYSPNPVSHQNIDWRTYQTYREYIDNK
SIHAYGSQTIQERLECLRAASQNTFNSSHHIPRSGWGPNPKGLRRRSTSHDRAYHGPPPP
FHHMPPRSSSQDRMSMAERGVHPRNWPPRSVSQDGLTHKARARSSDCDSVELGRPMVDRR
GYTSRLDQGTRPSRQSLSKQAVHHRPPAGYGRDSLRGTPMPDPTLYAKGPEQLQHQPHGV
PNMTQDRPSHLGKIISLEPSPTDQRAGVKDVNHVIQSRGRAETMQPAGEVPGREVAAVVG
HRSSSLSASHQRPQRLGILKTSHHHPPRTEPQVQVNGRGPSASELGVVLREKPPGSVKNP
SPLRHPSYILAVNEEDGSEPAADSVCWLPNDARREMHMRRLSKKQEKDQTSCSSSNLEES
LDSIPFIDEPASPSVDHEATSIPASAVISGVPAVLPLNPSSSPCPFIRRQMSHDQESLRN
AILESDASTKQERSKSCDEGLDNYREEGRGRSNSKHMPGLRGLRKALDGHKSSDDSGSRR
DSSSDIFSDSSKEGWLNFRQLNTEKSKRVSGGSRSWKQVYAVLRGHALTLYKDKKDGISH
ASSHSQSDDDPRPISIKACLIDISYSDTKRKNVLRLTTSHCGYLFQAEGRDDMLSWIRVI
QENSNLDDESAGITSQDLISRKIREYNTMMSAPSTKTEPSPKTSRQSLSIRHTLLGGKGE
GKSPHSPKTGERDDSSPPRDKAAWRRGIPGIMRKPFEKKATAGVTFGVRLDDCPSAQTNR
FVPLIVEVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELDNKGLMSDIDIQEDKWRDLN
VISSLLKSFFRKLPEPLFTNEKYADFIEANRTEDAVERLKELKRLILELPEHHYETLKFL
SGHLKLVSENCEKNKMEPRNLAIVFGPTLVRTSEDNMTNMVNHMPDQCKIVENLIQQFDW
FFTEEGDDDPVTSVEQESTVQSQPVPNIDHLLSNIGRTTTTTSAAEVSDSACSDSSKSKQ
GLWGSGKDQCSREMLRSSFFVSRKRKKPKDKAQPSSSDDDLDAVFAKKEQPEQQSMSHQD
LHPTWSPDSQTDVEREASERGEQPGERVQTNGKEFRSDGLMSQPSPSPSPKHTPSPCPRT
SSTRSPYTSQSPRLGHRRQVAHQSSLSDPPSNYDEVSDLGTMNSTSSQASVTRPRVRHGR
TGALGPETGASGLGAEVSSITSDYSTTSSMTFLTGAELSTLCPEVHSVAESRGGDDADDE
RSELISEGRPMETDSESDLSVFIGSVKETRPGKDFCQSDVPDAPRPLPSHRLIECDTLSR
KKSAARQKTDSDSSLDGGQSDKDSNRLSRVLGVVKGRSTSSLSSSSRSESEKGIEPAWRL
KITDRLKFRLRTSVDDMFGVGTQQSRSPEGRRDKKKNIRRRHTMGGQRDFAELSVMGDWQ
GGMGGGSRAELSAVDRLKPKCSSQDFSIREWIARERHRTSNPEVSLDFSEHQGALLLLRN
PDPQNPNHQVQEAPSSSLSDPLSPRPTPAELLNGDTGPQSKSLNLSATAHPHKLSGAQVV
QSRFYQYL
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgtcacattggaaaggtccatgcgatgaagaggacgagggactgaccagatcc
tctttgtgcgagaataacgtgccagagtggcgtgttcagggggattcccctgcgggcctg
ttcaacctgcagggagaggaggaacccttctcgtggccagggcctaagacactccgtctt
cgacgcacctctcaaggctttggcttcactctgcgccacttcattgtctacccacccgag
tcagccgtgcaccctatccccttcctggaggaagagcatggccgcagagggagacaacgg
aacaggctggagccaatggacaccatctttgtgaagcaagtgaaggagggaggtcctgcc
aacgaagctggactctgcacaggagacaggatagtaaaggtgaatggagcgagtatcatt
gggaaaacctactctcaggtcatagccttgatccaaaacagtgatgcctttcttgacctc
tgtgttatgccaaaagatgaagacatactgcagctggcctattcccaggatgcgtacctc
cgaagccgcagtacttacagtggaaacgcccatcacatccccgagccgccccccatatgt
taccctcgtgtagactgtaagcccccagggatggcccaggctacagagaccccctcccca
gttggagtgggggtacagggagcatgccggggggcaacaccaccagacacggggtaccgc
atggagattcccgtgcccccctcccctcctcctgcacacccgtaccccaaatcccagacc
gcggcgtgcatgcgcaacgacagcgtgaggactgtggtagttcctccagagctgggccgt
ataggaccagcacacagaatagactatagcctggtagggtcccctgaccctggcctcatc
agagtgcgtcctgggtctgtgtcccactaccccctgccacggaaaacagacatctacccc
tctggggcgagcctcttcaattacagtgccccgctacaccagtactcccccaaccctgtc
tctcaccaaaacatagactggcggacgtaccagacctacagggagtacatcgataacaag
agtatacacgcctatggcagccagaccatccaggagagactagaatgcctgcgagccgcc
agccagaacaccttcaactcctcccaccacatcccccggagtggctggggccccaaccct
aagggtctccggcgcaggagcacctcccacgaccgcgcctaccatggacctccgcccccc
ttccaccacatgcccccccgcagctcttcccaggaccgtatgagtatggcggagcggggg
gtccaccccaggaactggcctcctcgtagtgtgtcccaggatgggttaacacacaaggcc
cgggctcgctcctctgactgtgactctgtggagctgggccggcccatggtggatagacgg
ggctacactagcaggctggaccagggtacacgccccagcaggcagagcctctccaaacag
gctgtccatcaccgaccccctgcagggtacggtagggacagcctccggggaacgccaatg
cccgaccctaccctctatgctaaaggaccagagcagctccagcaccagcctcacggcgtt
cctaatatgacccaagacagaccctctcacctggggaagattatcagcttggagccctcc
ccaaccgaccaaagagctggggtcaaagatgtgaaccatgtgatccagagcagggggcgg
gcggagaccatgcagccggcaggggaggtgccagggagagaggtggcagcggtggtgggc
cataggtcctcgtccttatccgcctcccatcagagaccacagaggcttgggattctcaaa
acctcccaccaccacccacctcgcacagagccccaggtccaggtgaacggtcgcggccct
tcggcctcagaattgggcgtagtcctcagggaaaagcctcctgggtcggtgaagaacccc
agccccctgcgccacccttcctacatcctggcggtgaacgaggaggacggttcggagcca
gcagcggactcggtgtgctggctacccaacgatgcgcggcgggagatgcacatgcggcgg
ctgagcaagaagcaggagaaggaccagacctcatgctcctccagcaacctggaagagtcc
ctcgactcaatcccctttatcgacgagccggctagccctagtgttgaccatgaggccacg
tccattcctgcttccgccgtgatatctggcgttccagccgtactccccctgaacccaagc
tcctccccgtgccctttcattcgccgacagatgtcacatgaccaagagtctctcagaaat
gcgatcctggagtctgatgcttcgaccaaacaagaacggtccaaatcctgtgacgagggt
ctggataactacagagaggaaggcagaggccggtccaacagtaaacacatgcctggactg
agaggcctaagaaaggctctggatggacacaagtcgtctgatgactctggttccagaagg
gactcctcttcagatatcttcagtgactcttctaaagaaggctggctcaacttcaggcag
ctcaacactgagaagagcaagcgtgtgagcgggggttcgaggtcgtggaagcaggtgtac
gctgtgctgcgaggccacgccctcacgctctacaaggacaagaaggacggcatctctcac
gcctcctcccactcccagtccgacgacgacccacggccaatcagcatcaaggcctgcctg
attgacatctcctacagcgacacaaaacgcaagaacgtgctgcgactgaccacgtcgcac
tgcgggtacctgttccaggcggagggcagggatgacatgctgtcctggatcagagtcatc
caggagaatagtaatctggatgatgagagtgctggtataaccagccaggacctgatcagc
agaaagatcagagagtacaacaccatgatgagtgcccccagcaccaagactgagccttcc
cccaaaacctcccggcagtccctcagtatcagacacaccctcctgggggggaagggagaa
ggcaagagcccacactcacccaaaacaggagagagggatgactccagtcctccacgggat
aaggctgcctggaggaggggcatccccggcatcatgaggaagccctttgagaagaaggcc
acagctggggtcacctttggggtgcgcctcgatgactgcccatctgcacagaccaacagg
tttgttcccctcatcgtggaggtgtgctgtaagctggtagaggagagggggctggagtac
actgggatctacagagtaccagggaacaacgctgccatctccagcatgcaggaggagctg
gacaataaaggactgatgagtgacatcgacatccaagaagataaatggagggacctaaat
gtgatcagtagtttactgaaatccttcttccggaaacttccagaaccactttttacaaat
gaaaaatatgcagattttattgaagccaatcgaacagaagacgcagtggagaggttgaaa
gagctcaagaggctgatccttgaattgcctgagcatcactatgaaaccctcaaatttctc
tctggacacctcaagttggtctctgaaaactgtgagaaaaataagatggagcctcgtaac
ctggccatcgtgtttggtccgactctggtcaggacctcggaggacaacatgaccaatatg
gtcaaccacatgccagaccagtgcaagatagtggagaacctcattcagcagtttgactgg
ttcttcactgaggagggggacgatgaccctgttacctccgtggaacaggagagtacagtg
cagtctcagcctgtgccgaacatcgaccacctgctgtccaacatcggccggaccacaaca
accacctcagctgcggaagtctcagattcagcatgcagtgactcctccaaatcaaagcag
ggcttgtggggctctgggaaggaccagtgtagcagggagatgcttcgctcctccttcttt
gtcagccgcaagcgtaagaagcccaaggacaaggctcagcccagcagctctgacgacgac
ctggacgccgtgtttgctaagaaggagcagccagaacaacaaagcatgagccaccaggac
ctccacccaacctggtccccagacagccagacggatgtggagagggaggccagcgagaga
ggggaacagccaggggaaagggtccaaaccaacgggaaagagttccgttcagacggcctc
atgtctcagccctctccatccccctctcccaaacacaccccatccccctgcccccgtacc
tcctccacacgctcgccctacacctcccagtcccctcgcctcggccaccgcaggcaggtg
gcccaccagtcatctctgtcggacccaccctccaactacgatgaggtctcagacctgggc
accatgaacagcaccagctctcaggcatctgtgacacgacccagggtgaggcatggcagg
acaggggccctgggaccagaaactggggccagtggcctgggggccgaggtcagctccatc
acctcagattactccaccacctcctccatgaccttcctcaccggggccgagctgagcacg
ctctgtccagaggtacactcggtggccgagagcaggggaggagatgacgctgatgatgag
cgtagtgagctgattagtgagggccggcccatggagacggacagcgagagcgacctatcg
gtgtttattgggagcgtgaaggagacccggccggggaaagatttctgccaatcagacgtg
ccggatgcgcccaggcccctcccctcccacagactcatcgagtgtgatactctctccagg
aagaaatctgctgcgcgtcagaagactgacagcgattcctctttggacggagggcagagc
gacaaggattccaataggctgtctcgcgttctgggggtggttaaggggcgttccaccagc
agccttagctcctcctcccgcagcgagtcagagaaggggattgagcctgcatggcgtctc
aagatcacagaccggctgaagttccgtctgcggacgtccgtagacgacatgttcggggtg
ggtacccagcagagccgctctccagagggacgcagggacaagaagaagaacatcagacgc
agacacaccatgggaggccagagggactttgctgagctgtctgtgatgggggactggcag
ggggggatgggcgggggctcgcgggcagagctgtcggccgtggaccggctgaagcccaag
tgttcttcccaggacttctccatccgggagtggattgcccgtgagcgccaccgcacctcc
aaccccgaggtaagcctggacttctctgaacaccagggggcactgctcctcctacgcaac
cccgacccccaaaaccccaaccaccaggtccaggaggccccgtcgtcgtccctctcagac
cccctctcaccacgcccaactccagctgagctgctgaacggagacacaggtccccagagt
aaaagcctgaatctgtcggccaccgcacacccacacaaactctctggtgctcaggtggtc
cagtctcgcttctaccagtacctgtga
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