Oncorhynchus nerka (sockeye salmon): 115114529
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Entry
115114529 CDS
T07952
Name
(RefSeq) interferon regulatory factor 4-like isoform X1
KO
K09445
interferon regulatory factor 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115114529
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115114529
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Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
MH2
Motif
Other DBs
NCBI-GeneID:
115114529
NCBI-ProteinID:
XP_029498695
LinkDB
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Position
LG9b:26641046..26650935
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AA seq
496 aa
AA seq
DB search
MVREMNFEGDSGLSVICGNGKLRQWLIDQIDSSIYPGLVWENEEKSIFRIPWKHAGKQDY
NRDEDAALFKAWALFKGKHREGVDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISDPF
KVYRIIPEGAKRGIKMAETTSHMSSVNSYPMHSLYPSLQSQVSGGFMIPQERKEWRDYSH
TLDQPQLHQPPHTELQYSQCHYPQPLSRPWHTGPHTDNGYQFTGSFCSYSSSESHPTAFK
MDHNMSTLSDFRLHVSLFYRESLVKKVTTSSPEGCRITSSSSSSSSPSSLCHEDRLYSGA
ETVQFPSPYPQSQRRGAEKLPNVLERGVLLWMTLDGLYAKRLCQSRVYWEGPLAPYTDKP
NKLEKEQTCKLFDTQQFLTELQGYAHHGRPMPRHQVVLCFGDEYPDTQRQAKMITAQVEP
MFARGMIYFSQQSSSHCLRDYELQGHTEISLPAPGVYQRTLQQSSPLAPGDYQRTLQQSS
TLAPGDYQRTLQHMQE
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggttagagagatgaacttcgagggggacagcggcctgtcagtgatttgtggcaatggg
aaacttagacagtggctgatcgatcagattgacagcagcatctatcccggactggtttgg
gagaatgaagagaaaagcattttcaggattccgtggaaacatgcgggcaaacaggattac
aatcgtgacgaggatgctgcactcttcaaggcctgggcattgttcaaagggaaacatagg
gaaggagtggacaaaccagacccccccacatggaagaccagactgcgatgtgctctgaac
aaaagcaatgactttgatgagctggtggagcgaagccaactggacatatccgatcctttc
aaagtctacagaatcataccggagggagctaagagagggatcaagatggcagagacaacg
tcccacatgagctcagtcaacagctaccctatgcactctctatacccatctctacagagc
caggtgtctggcggattcatgattcctcaggagaggaaggagtggagggattacagccac
acactggaccagcctcagcttcaccagccaccccacactgagctgcagtacagccagtgc
cactacccacagccactcagccgaccatggcacaccgggccacacacagataacggttat
cagtttactggctccttctgttcctactcttcctcagagtctcaccccacagcatttaaa
atggaccacaacatgtctaccctttctgacttccgactgcacgtatccctgttctaccgt
gagtctctggtcaagaaggtaaccacctctagtcctgaaggctgccggatcacctcttct
tcctcctcatcttcctctccgtcctccctctgccacgaggacaggctgtacagtggtgca
gagacggtgcagttcccctccccttacccccagtctcagaggagaggggcagagaagcta
cccaacgtcctggagaggggcgtgctcctgtggatgacgttagatgggctctatgccaag
cggctgtgccagagccgagtgtactgggaaggcccgctggcaccctacacggacaaaccc
aataaattggagaaagaacagacctgcaagctgtttgacacccagcagttcctcactgag
ctgcaggggtatgcccaccatggccgtcccatgcccaggcaccaggtggtgctgtgtttc
ggagacgagtacccggacacccagcgccaggccaagatgatcacagcacaggtggagccc
atgtttgccaggggcatgatatacttcagccagcagagcagcagtcactgcctgagggac
tatgagctacagggacacacagagatctcccttccggctccaggagtctaccagaggacc
cttcaacagagctcccctttagctccaggagactaccagaggacccttcaacagagctcc
actctagctccaggagactaccagaggaccctgcaacacatgcaggagtaa
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